RNA–Protein interactions for RNA: ENST00000461489.1

COL21A1-205, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 4

Gene COL21A1, Length 555 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-205ENST00000461489 SPRED3Q2MJR0 410 aa7.69□□□□□ -1.18
COL21A1-205ENST00000461489 CDPF1Q6NVV7 123 aa7.69□□□□□ -1.18
COL21A1-205ENST00000461489 C2CD4AQ8NCU7 369 aaPredicted RBP7.69□□□□□ -1.18
COL21A1-205ENST00000461489 YIPF2Q9BWQ6 316 aa7.69□□□□□ -1.18
COL21A1-205ENST00000461489 USTQ9Y2C2 406 aa7.69□□□□□ -1.18
COL21A1-205ENST00000461489 NEFLP07196 543 aa7.68□□□□□ -1.18
COL21A1-205ENST00000461489 TAL1P17542 331 aaPredicted RBP7.68□□□□□ -1.18
COL21A1-205ENST00000461489 GRIA4P48058 902 aa7.68□□□□□ -1.18
COL21A1-205ENST00000461489 KRTAP1-3Q8IUG1 177 aa7.68□□□□□ -1.18
COL21A1-205ENST00000461489 NDUFB5O43674 189 aa7.67□□□□□ -1.18
COL21A1-205ENST00000461489 CYP11A1P05108 521 aa7.67□□□□□ -1.18
COL21A1-205ENST00000461489 MAOBP27338 520 aa7.67□□□□□ -1.18
COL21A1-205ENST00000461489 SERPINB4P48594 390 aa7.67□□□□□ -1.18
COL21A1-205ENST00000461489 POU4F3Q15319 338 aa7.67□□□□□ -1.18
COL21A1-205ENST00000461489 ZNF423Q2M1K9 1284 aa7.67□□□□□ -1.18
COL21A1-205ENST00000461489 HP1BP3Q5SSJ5 553 aaPredicted RBP7.67□□□□□ -1.18
COL21A1-205ENST00000461489 USPL1Q5W0Q7 1092 aa7.67□□□□□ -1.18
COL21A1-205ENST00000461489 C14orf37Q86TY3 774 aa7.67□□□□□ -1.18
COL21A1-205ENST00000461489 TCF12Q99081 682 aa7.67□□□□□ -1.18
COL21A1-205ENST00000461489 NRSN2Q9GZP1 204 aa7.67□□□□□ -1.18
COL21A1-205ENST00000461489 ADH5P11766 374 aa7.66□□□□□ -1.18
COL21A1-205ENST00000461489 CPSF6Q16630 551 aaKnown RBP eCLIP7.66□□□□□ -1.18
COL21A1-205ENST00000461489 LCE3BQ5TA77 95 aa7.66□□□□□ -1.18
COL21A1-205ENST00000461489 DDX54Q8TDD1 881 aaKnown RBP7.66□□□□□ -1.18
COL21A1-205ENST00000461489 TBC1D32Q96NH3 1257 aa7.66□□□□□ -1.18
COL21A1-205ENST00000461489 METTL22Q9BUU2 404 aaPredicted RBP7.66□□□□□ -1.18
COL21A1-205ENST00000461489 ANGEL1Q9UNK9 670 aaKnown RBP7.66□□□□□ -1.18
COL21A1-205ENST00000461489 FOSL1P15407 271 aa7.65□□□□□ -1.18
COL21A1-205ENST00000461489 CORO1BQ9BR76 489 aa7.65□□□□□ -1.18
COL21A1-205ENST00000461489 EHD4Q9H223 541 aa7.65□□□□□ -1.18
COL21A1-205ENST00000461489 ZFYVE1Q9HBF4 777 aa7.65□□□□□ -1.18
COL21A1-205ENST00000461489 GOLGA2P5Q9HBQ8 144 aa7.65□□□□□ -1.18
COL21A1-205ENST00000461489 RAD18Q9NS91 495 aa7.65□□□□□ -1.18
COL21A1-205ENST00000461489 PRKAG2Q9UGJ0 569 aa7.65□□□□□ -1.18
COL21A1-205ENST00000461489 CTSBP07858 339 aa7.64□□□□□ -1.19
COL21A1-205ENST00000461489 RAB6AP20340 208 aa7.64□□□□□ -1.19
COL21A1-205ENST00000461489 TXKP42681 527 aa7.64□□□□□ -1.19
COL21A1-205ENST00000461489 PDE3BQ13370 1112 aa7.64□□□□□ -1.19
COL21A1-205ENST00000461489 AKAP4Q5JQC9 854 aa7.64□□□□□ -1.19
COL21A1-205ENST00000461489 KIAA0319Q5VV43 1072 aa7.64□□□□□ -1.19
COL21A1-205ENST00000461489 DYMQ7RTS9 669 aa7.64□□□□□ -1.19
COL21A1-205ENST00000461489 ZAR1Q86SH2 424 aa7.64□□□□□ -1.19
COL21A1-205ENST00000461489 SHISA5Q8N114 240 aa7.64□□□□□ -1.19
COL21A1-205ENST00000461489 EZH1Q92800 747 aaPredicted RBP7.64□□□□□ -1.19
COL21A1-205ENST00000461489 ACTL7BQ9Y614 415 aa7.64□□□□□ -1.19
COL21A1-205ENST00000461489 CPNE3O75131 537 aaKnown RBP7.63□□□□□ -1.19
COL21A1-205ENST00000461489 B3GALT4O96024 378 aa7.63□□□□□ -1.19
COL21A1-205ENST00000461489 ADMP35318 185 aa7.63□□□□□ -1.19
COL21A1-205ENST00000461489 ORC1Q13415 861 aa7.63□□□□□ -1.19
COL21A1-205ENST00000461489 MAP7Q14244 749 aa7.63□□□□□ -1.19
COL21A1-205ENST00000461489 AP4E1Q9UPM8 1137 aa7.63□□□□□ -1.19
COL21A1-205ENST00000461489 CYP26A1O43174 497 aa7.62□□□□□ -1.19
COL21A1-205ENST00000461489 NFICP08651 508 aa7.62□□□□□ -1.19
COL21A1-205ENST00000461489 ARHGAP4P98171 946 aa7.62□□□□□ -1.19
COL21A1-205ENST00000461489 ECM1Q16610 540 aa7.62□□□□□ -1.19
COL21A1-205ENST00000461489 MSMPQ1L6U9 139 aa7.62□□□□□ -1.19
COL21A1-205ENST00000461489 TMC1Q8TDI8 760 aa7.62□□□□□ -1.19
COL21A1-205ENST00000461489 TRIM56Q9BRZ2 755 aaKnown RBP7.62□□□□□ -1.19
COL21A1-205ENST00000461489 ZNF576Q9H609 170 aa7.62□□□□□ -1.19
COL21A1-205ENST00000461489 NPHS2Q9NP85 383 aa7.62□□□□□ -1.19
COL21A1-205ENST00000461489 FAM170BA6NMN3 283 aa7.61□□□□□ -1.19
COL21A1-205ENST00000461489 ECEL1O95672 775 aa7.61□□□□□ -1.19
COL21A1-205ENST00000461489 PDE3AQ14432 1141 aa7.61□□□□□ -1.19
COL21A1-205ENST00000461489 FMNL2Q96PY5 1086 aa7.61□□□□□ -1.19
COL21A1-205ENST00000461489 FAM129BQ96TA1 746 aa7.61□□□□□ -1.19
COL21A1-205ENST00000461489 RNF114Q9Y508 228 aa7.61□□□□□ -1.19
COL21A1-205ENST00000461489 ITPKAP23677 461 aa7.6□□□□□ -1.19
COL21A1-205ENST00000461489 ASPAP45381 313 aa7.6□□□□□ -1.19
COL21A1-205ENST00000461489 DUSP27Q5VZP5 1158 aa7.6□□□□□ -1.19
COL21A1-205ENST00000461489 VSIG10LQ86VR7 867 aa7.6□□□□□ -1.19
COL21A1-205ENST00000461489 KRTAP19-1Q8IUB9 90 aa7.6□□□□□ -1.19
COL21A1-205ENST00000461489 ABI1Q8IZP0 508 aa7.6□□□□□ -1.19
COL21A1-205ENST00000461489 FAM105AQ9NUU6 356 aa7.6□□□□□ -1.19
COL21A1-205ENST00000461489 CCDC39Q9UFE4 941 aa7.6□□□□□ -1.19
COL21A1-205ENST00000461489 ADGRE2Q9UHX3 823 aa7.6□□□□□ -1.19
COL21A1-205ENST00000461489 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.59□□□□□ -1.19
COL21A1-205ENST00000461489 GADD45BO75293 160 aaPredicted RBP7.59□□□□□ -1.19
COL21A1-205ENST00000461489 CITED4Q96RK1 184 aa7.59□□□□□ -1.19
COL21A1-205ENST00000461489 SEMA6CQ9H3T2 930 aa7.59□□□□□ -1.19
COL21A1-205ENST00000461489 ACSS3Q9H6R3 686 aa7.59□□□□□ -1.19
COL21A1-205ENST00000461489 LRRC4CQ9HCJ2 640 aa7.59□□□□□ -1.19
COL21A1-205ENST00000461489 EIF1AYO14602 144 aaKnown RBP7.58□□□□□ -1.2
COL21A1-205ENST00000461489 AOC2O75106 756 aa7.58□□□□□ -1.2
COL21A1-205ENST00000461489 PRNPP04156 253 aa7.58□□□□□ -1.2
COL21A1-205ENST00000461489 CYP27A1Q02318 531 aa7.58□□□□□ -1.2
COL21A1-205ENST00000461489 AP3B2Q13367 1082 aa7.58□□□□□ -1.2
COL21A1-205ENST00000461489 GATA6Q92908 595 aa7.58□□□□□ -1.2
COL21A1-205ENST00000461489 CCDC74AQ96AQ1 378 aa7.58□□□□□ -1.2
COL21A1-205ENST00000461489 FBXL18Q96ME1 805 aa7.58□□□□□ -1.2
COL21A1-205ENST00000461489 NIF3L1Q9GZT8 377 aa7.58□□□□□ -1.2
COL21A1-205ENST00000461489 ABCB6Q9NP58 842 aa7.58□□□□□ -1.2
COL21A1-205ENST00000461489 BSDC1Q9NW68 430 aaPredicted RBP7.58□□□□□ -1.2
COL21A1-205ENST00000461489 PTPN12Q05209 780 aaKnown RBP7.57□□□□□ -1.2
COL21A1-205ENST00000461489 TP53INP2Q8IXH6 220 aa7.57□□□□□ -1.2
COL21A1-205ENST00000461489 DNAJC25Q9H1X3 360 aa7.57□□□□□ -1.2
COL21A1-205ENST00000461489 DAGLAQ9Y4D2 1042 aa7.57□□□□□ -1.2
COL21A1-205ENST00000461489 TMEM238LA0A1B0GVL6 79 aa7.56□□□□□ -1.2
COL21A1-205ENST00000461489 GPR182O15218 404 aa7.56□□□□□ -1.2
COL21A1-205ENST00000461489 PRPF40BQ6NWY9 871 aaKnown RBP7.56□□□□□ -1.2
COL21A1-205ENST00000461489 ZNF765Q7L2R6 523 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 609.6 ms