RNA–Protein interactions for RNA: ENST00000461377.5

CCM2-203, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,983 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-203ENST00000461377 KIF3AQ9Y496 699 aa23.81■■□□□ 1.4
CCM2-203ENST00000461377 H3BQV1 296 aa23.8■■□□□ 1.4
CCM2-203ENST00000461377 IFFO2Q5TF58 517 aa23.8■■□□□ 1.4
CCM2-203ENST00000461377 NAA16Q6N069 864 aaPredicted RBP23.8■■□□□ 1.4
CCM2-203ENST00000461377 TTC6Q86TZ1 520 aa23.8■■□□□ 1.4
CCM2-203ENST00000461377 NLRP3Q96P20 1036 aa23.8■■□□□ 1.4
CCM2-203ENST00000461377 EPB41L4AQ9HCS5 686 aaPredicted RBP23.8■■□□□ 1.4
CCM2-203ENST00000461377 NAP1L2Q9ULW6 460 aaPredicted RBP23.8■■□□□ 1.4
CCM2-203ENST00000461377 C4BP0C0L5 1744 aa23.8■■□□□ 1.4
CCM2-203ENST00000461377 PNPLA7Q6ZV29 1317 aa23.8■■□□□ 1.4
CCM2-203ENST00000461377 HSPA1LP34931 641 aa23.8■■□□□ 1.4
CCM2-203ENST00000461377 TRDNQ13061 729 aa23.8■■□□□ 1.4
CCM2-203ENST00000461377 ZSCAN16Q9H4T2 348 aaPredicted RBP23.8■■□□□ 1.4
CCM2-203ENST00000461377 GNL3LQ9NVN8 582 aaKnown RBP23.8■■□□□ 1.4
CCM2-203ENST00000461377 TPTE2Q6XPS3 522 aa23.79■■□□□ 1.4
CCM2-203ENST00000461377 IFNL3Q8IZI9 196 aa23.79■■□□□ 1.4
CCM2-203ENST00000461377 ARMT1Q9H993 441 aa23.79■■□□□ 1.4
CCM2-203ENST00000461377 TRPC5Q9UL62 973 aaPredicted RBP23.79■■□□□ 1.4
CCM2-203ENST00000461377 TAF1P21675 1872 aa23.78■■□□□ 1.4
CCM2-203ENST00000461377 KLF18A0A0U1RQI7 1052 aa23.78■■□□□ 1.4
CCM2-203ENST00000461377 GYG1P46976 350 aa23.78■■□□□ 1.4
CCM2-203ENST00000461377 SEPT12Q8IYM1 358 aa23.78■■□□□ 1.4
CCM2-203ENST00000461377 SCAND2PQ9GZW5 306 aaPredicted RBP23.78■■□□□ 1.4
CCM2-203ENST00000461377 COL1A1P02452 1464 aaPredicted RBP23.78■■□□□ 1.4
CCM2-203ENST00000461377 GNAT2P19087 354 aa23.78■■□□□ 1.4
CCM2-203ENST00000461377 RPS8P62241 208 aaKnown RBP23.78■■□□□ 1.4
CCM2-203ENST00000461377 LRP2BPQ9P2M1 347 aa23.78■■□□□ 1.4
CCM2-203ENST00000461377 HPS5Q9UPZ3 1129 aa23.78■■□□□ 1.4
CCM2-203ENST00000461377 C4AP0C0L4 1744 aa23.77■■□□□ 1.4
CCM2-203ENST00000461377 WTIPA6NIX2 430 aaPredicted RBP23.77■■□□□ 1.4
CCM2-203ENST00000461377 TSPY26PQ9H489 355 aa23.77■■□□□ 1.4
CCM2-203ENST00000461377 DENND2AQ9ULE3 1009 aa23.77■■□□□ 1.4
CCM2-203ENST00000461377 GSG1L2A8MUP6 293 aa23.76■■□□□ 1.39
CCM2-203ENST00000461377 LETM1O95202 739 aaPredicted RBP23.76■■□□□ 1.39
CCM2-203ENST00000461377 CCDC173Q0VFZ6 552 aa23.76■■□□□ 1.39
CCM2-203ENST00000461377 CAVIN4Q5BKX8 364 aa23.76■■□□□ 1.39
CCM2-203ENST00000461377 CYB5R4Q7L1T6 521 aa23.76■■□□□ 1.39
CCM2-203ENST00000461377 PPP1R9BQ96SB3 815 aa23.76■■□□□ 1.39
CCM2-203ENST00000461377 NAPBQ9H115 298 aa23.76■■□□□ 1.39
CCM2-203ENST00000461377 IQSEC3Q9UPP2 1182 aaPredicted RBP23.76■■□□□ 1.39
CCM2-203ENST00000461377 TIAM2Q8IVF5 1701 aa23.76■■□□□ 1.39
CCM2-203ENST00000461377 GOLGA8BA8MQT2 603 aa23.76■■□□□ 1.39
CCM2-203ENST00000461377 FAM43AQ8N2R8 423 aa23.76■■□□□ 1.39
CCM2-203ENST00000461377 LCORLQ8N3X6 602 aa23.76■■□□□ 1.39
CCM2-203ENST00000461377 NKX2-3Q8TAU0 364 aa23.76■■□□□ 1.39
CCM2-203ENST00000461377 BCL11BQ9C0K0 894 aaPredicted RBP23.76■■□□□ 1.39
CCM2-203ENST00000461377 CARMIL3Q8ND23 1372 aa23.75■■□□□ 1.39
CCM2-203ENST00000461377 TRAPPC3LQ5T215 181 aa23.75■■□□□ 1.39
CCM2-203ENST00000461377 KLHL34Q8N239 644 aa23.75■■□□□ 1.39
CCM2-203ENST00000461377 FAM84BQ96KN1 310 aaPredicted RBP23.75■■□□□ 1.39
CCM2-203ENST00000461377 NEDD4P46934 1319 aa23.75■■□□□ 1.39
CCM2-203ENST00000461377 SH2B2O14492 632 aaPredicted RBP23.74■■□□□ 1.39
CCM2-203ENST00000461377 DHX16O60231 1041 aaKnown RBP23.74■■□□□ 1.39
CCM2-203ENST00000461377 FDPSP14324 419 aaKnown RBP23.74■■□□□ 1.39
CCM2-203ENST00000461377 RFC4P35249 363 aa23.74■■□□□ 1.39
CCM2-203ENST00000461377 LEO1Q8WVC0 666 aaPredicted RBP23.74■■□□□ 1.39
CCM2-203ENST00000461377 ANP32BQ92688 251 aaKnown RBP23.74■■□□□ 1.39
CCM2-203ENST00000461377 SPATA32Q96LK8 384 aa23.74■■□□□ 1.39
CCM2-203ENST00000461377 ANGEL1Q9UNK9 670 aaKnown RBP23.74■■□□□ 1.39
CCM2-203ENST00000461377 FAM196AQ6ZSG2 479 aa23.74■■□□□ 1.39
CCM2-203ENST00000461377 FBXO33Q7Z6M2 555 aa23.74■■□□□ 1.39
CCM2-203ENST00000461377 TFIP11Q9UBB9 837 aaKnown RBP23.74■■□□□ 1.39
CCM2-203ENST00000461377 B4E1Z4 1266 aa23.73■■□□□ 1.39
CCM2-203ENST00000461377 PRKAB2O43741 272 aa23.73■■□□□ 1.39
CCM2-203ENST00000461377 TM4SF1P30408 202 aa23.73■■□□□ 1.39
CCM2-203ENST00000461377 TPRNQ4KMQ1 711 aa23.73■■□□□ 1.39
CCM2-203ENST00000461377 CCDC24Q8N4L8 307 aa23.73■■□□□ 1.39
CCM2-203ENST00000461377 TMEM87BQ96K49 555 aa23.73■■□□□ 1.39
CCM2-203ENST00000461377 ANKRD2Q9GZV1 360 aa23.73■■□□□ 1.39
CCM2-203ENST00000461377 SLC4A4Q9Y6R1 1079 aa23.73■■□□□ 1.39
CCM2-203ENST00000461377 CYP7A1P22680 504 aa23.72■■□□□ 1.39
CCM2-203ENST00000461377 NACAP1Q9BZK3 213 aa23.72■■□□□ 1.39
CCM2-203ENST00000461377 RTN4Q9NQC3 1192 aaKnown RBP23.72■■□□□ 1.39
CCM2-203ENST00000461377 SEMA3EO15041 775 aa23.72■■□□□ 1.39
CCM2-203ENST00000461377 VPS37DQ86XT2 251 aa23.72■■□□□ 1.39
CCM2-203ENST00000461377 MIGA1Q8NAN2 632 aa23.72■■□□□ 1.39
CCM2-203ENST00000461377 LRRC4BQ9NT99 713 aa23.72■■□□□ 1.39
CCM2-203ENST00000461377 TNRC6CQ9HCJ0 1690 aaKnown RBP23.72■■□□□ 1.39
CCM2-203ENST00000461377 FOSBP53539 338 aa23.71■■□□□ 1.39
CCM2-203ENST00000461377 ADGRA1Q86SQ6 560 aa23.71■■□□□ 1.39
CCM2-203ENST00000461377 RAI14Q9P0K7 980 aa23.71■■□□□ 1.39
CCM2-203ENST00000461377 ABCF2Q9UG63 623 aa23.71■■□□□ 1.39
CCM2-203ENST00000461377 TACC3Q9Y6A5 838 aa23.71■■□□□ 1.39
CCM2-203ENST00000461377 ADRA2BP18089 450 aa23.71■■□□□ 1.39
CCM2-203ENST00000461377 ADD1P35611 737 aaKnown RBP23.71■■□□□ 1.39
CCM2-203ENST00000461377 CTDSPL2Q05D32 466 aa23.71■■□□□ 1.39
CCM2-203ENST00000461377 PDS5AQ29RF7 1337 aaKnown RBP23.71■■□□□ 1.39
CCM2-203ENST00000461377 CNNM2Q9H8M5 875 aa23.71■■□□□ 1.39
CCM2-203ENST00000461377 PPFIA3O75145 1194 aa23.7■■□□□ 1.38
CCM2-203ENST00000461377 KLRK1P26718 216 aa23.7■■□□□ 1.38
CCM2-203ENST00000461377 TDO2P48775 406 aa23.7■■□□□ 1.38
CCM2-203ENST00000461377 NFIXQ14938 502 aa23.7■■□□□ 1.38
CCM2-203ENST00000461377 AKNAD1Q5T1N1 836 aa23.7■■□□□ 1.38
CCM2-203ENST00000461377 IGDCC4Q8TDY8 1250 aa23.7■■□□□ 1.38
CCM2-203ENST00000461377 CFAP45Q9UL16 551 aa23.7■■□□□ 1.38
CCM2-203ENST00000461377 STAG1Q8WVM7 1258 aa23.69■■□□□ 1.38
CCM2-203ENST00000461377 CACNA1SQ13698 1873 aa23.69■■□□□ 1.38
CCM2-203ENST00000461377 RAB11FIP4Q86YS3 637 aa23.69■■□□□ 1.38
CCM2-203ENST00000461377 KRT23Q9C075 422 aa23.69■■□□□ 1.38
CCM2-203ENST00000461377 INCENPQ9NQS7 918 aa23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms