RNA–Protein interactions for RNA: ENST00000461159.6

HDAC9-219, Transcript of histone deacetylase 9, humanhuman

TSL 2

Gene HDAC9, Length 2,557 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-219ENST00000461159 DBNLQ9UJU6 430 aaKnown RBP9.94□□□□□ -0.82
HDAC9-219ENST00000461159 NSFL1CQ9UNZ2 370 aaKnown RBP9.94□□□□□ -0.82
HDAC9-219ENST00000461159 ANKRD36CQ5JPF3 1778 aa9.94□□□□□ -0.82
HDAC9-219ENST00000461159 TAF1P21675 1872 aa9.94□□□□□ -0.82
HDAC9-219ENST00000461159 ABCC12Q96J65 1359 aa9.94□□□□□ -0.82
HDAC9-219ENST00000461159 EYA2O00167 538 aa9.93□□□□□ -0.82
HDAC9-219ENST00000461159 IPO7O95373 1038 aaKnown RBP9.93□□□□□ -0.82
HDAC9-219ENST00000461159 CHGBP05060 677 aa9.93□□□□□ -0.82
HDAC9-219ENST00000461159 GYS1P13807 737 aa9.93□□□□□ -0.82
HDAC9-219ENST00000461159 PARP10Q53GL7 1025 aa9.93□□□□□ -0.82
HDAC9-219ENST00000461159 CXorf56Q9H5V9 222 aa9.93□□□□□ -0.82
HDAC9-219ENST00000461159 AOX1Q06278 1338 aa9.93□□□□□ -0.82
HDAC9-219ENST00000461159 PLSCR1O15162 318 aa9.93□□□□□ -0.82
HDAC9-219ENST00000461159 FOXD4L6Q3SYB3 417 aaPredicted RBP9.93□□□□□ -0.82
HDAC9-219ENST00000461159 TNNI3KQ59H18 835 aa9.93□□□□□ -0.82
HDAC9-219ENST00000461159 FOXD4L3Q6VB84 417 aaPredicted RBP9.93□□□□□ -0.82
HDAC9-219ENST00000461159 COL23A1Q86Y22 540 aaPredicted RBP9.93□□□□□ -0.82
HDAC9-219ENST00000461159 ERC1Q8IUD2 1116 aa9.93□□□□□ -0.82
HDAC9-219ENST00000461159 SDR16C5Q8N3Y7 309 aa9.93□□□□□ -0.82
HDAC9-219ENST00000461159 PDCL2Q8N4E4 241 aa9.93□□□□□ -0.82
HDAC9-219ENST00000461159 FPGT-TNNI3KV9GXZ4 949 aa9.93□□□□□ -0.82
HDAC9-219ENST00000461159 CDHR2Q9BYE9 1310 aa9.92□□□□□ -0.82
HDAC9-219ENST00000461159 ANKRD18BA2A2Z9 1011 aa9.92□□□□□ -0.82
HDAC9-219ENST00000461159 BIRC2Q13490 618 aa9.92□□□□□ -0.82
HDAC9-219ENST00000461159 DNAJC21Q5F1R6 531 aaKnown RBP9.92□□□□□ -0.82
HDAC9-219ENST00000461159 C1QTNF12Q5T7M4 302 aa9.92□□□□□ -0.82
HDAC9-219ENST00000461159 PLA2G12BQ9BX93 195 aa9.92□□□□□ -0.82
HDAC9-219ENST00000461159 PAXBP1Q9Y5B6 917 aa9.92□□□□□ -0.82
HDAC9-219ENST00000461159 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.92□□□□□ -0.82
HDAC9-219ENST00000461159 RPS6KL1Q9Y6S9 549 aa9.92□□□□□ -0.82
HDAC9-219ENST00000461159 CICQ96RK0 1608 aaPredicted RBP9.92□□□□□ -0.82
HDAC9-219ENST00000461159 COL4A1P02462 1669 aa9.92□□□□□ -0.82
HDAC9-219ENST00000461159 ADORA1P30542 326 aa9.92□□□□□ -0.82
HDAC9-219ENST00000461159 GSCP56915 257 aaPredicted RBP9.92□□□□□ -0.82
HDAC9-219ENST00000461159 TERF2Q15554 542 aa9.92□□□□□ -0.82
HDAC9-219ENST00000461159 METTL24Q5JXM2 366 aa9.92□□□□□ -0.82
HDAC9-219ENST00000461159 CCDC91Q7Z6B0 441 aa9.92□□□□□ -0.82
HDAC9-219ENST00000461159 ESYT1Q9BSJ8 1104 aa9.92□□□□□ -0.82
HDAC9-219ENST00000461159 ANAPC4Q9UJX5 808 aa9.92□□□□□ -0.82
HDAC9-219ENST00000461159 NUB1Q9Y5A7 615 aa9.92□□□□□ -0.82
HDAC9-219ENST00000461159 WDR33Q9C0J8 1336 aaKnown RBP9.92□□□□□ -0.82
HDAC9-219ENST00000461159 A0A1B0GUL7 405 aa9.91□□□□□ -0.82
HDAC9-219ENST00000461159 CHAMP1Q96JM3 812 aa9.91□□□□□ -0.82
HDAC9-219ENST00000461159 NOL10Q9BSC4 688 aaKnown RBP9.91□□□□□ -0.82
HDAC9-219ENST00000461159 ECHDC1Q9NTX5 307 aa9.91□□□□□ -0.82
HDAC9-219ENST00000461159 CEP126Q9P2H0 1117 aa9.91□□□□□ -0.82
HDAC9-219ENST00000461159 NEFHP12036 1026 aa9.91□□□□□ -0.82
HDAC9-219ENST00000461159 SCP2P22307 547 aa9.91□□□□□ -0.82
HDAC9-219ENST00000461159 IL15P40933 162 aaPredicted RBP9.91□□□□□ -0.82
HDAC9-219ENST00000461159 SLFNL1Q499Z3 407 aa9.91□□□□□ -0.82
HDAC9-219ENST00000461159 TPTE2Q6XPS3 522 aa9.91□□□□□ -0.82
HDAC9-219ENST00000461159 DDX46Q7L014 1031 aaKnown RBP9.91□□□□□ -0.82
HDAC9-219ENST00000461159 CELF1Q92879 486 aaKnown RBP9.91□□□□□ -0.82
HDAC9-219ENST00000461159 MPHOSPH8Q99549 860 aa9.91□□□□□ -0.82
HDAC9-219ENST00000461159 SNRKQ9NRH2 765 aa9.91□□□□□ -0.82
HDAC9-219ENST00000461159 SPDYE4A6NLX3 237 aa9.9□□□□□ -0.82
HDAC9-219ENST00000461159 CHMLP26374 656 aa9.9□□□□□ -0.82
HDAC9-219ENST00000461159 CCDC152Q4G0S7 254 aa9.9□□□□□ -0.82
HDAC9-219ENST00000461159 PI16Q6UXB8 463 aa9.9□□□□□ -0.82
HDAC9-219ENST00000461159 NUCKS1Q9H1E3 243 aaKnown RBP9.9□□□□□ -0.82
HDAC9-219ENST00000461159 RIPOR2Q9Y4F9 1068 aa9.9□□□□□ -0.82
HDAC9-219ENST00000461159 ZNF831Q5JPB2 1677 aa9.9□□□□□ -0.82
HDAC9-219ENST00000461159 DDR1Q08345 913 aa9.9□□□□□ -0.82
HDAC9-219ENST00000461159 CNBD1Q8NA66 436 aa9.9□□□□□ -0.82
HDAC9-219ENST00000461159 PIBF1Q8WXW3 757 aa9.9□□□□□ -0.82
HDAC9-219ENST00000461159 AKT1S1Q96B36 256 aa9.9□□□□□ -0.82
HDAC9-219ENST00000461159 MYH3P11055 1940 aa9.89□□□□□ -0.83
HDAC9-219ENST00000461159 SERPINB2P05120 415 aa9.89□□□□□ -0.83
HDAC9-219ENST00000461159 CCDC183Q5T5S1 534 aa9.89□□□□□ -0.83
HDAC9-219ENST00000461159 RPAINQ86UA6 219 aa9.89□□□□□ -0.83
HDAC9-219ENST00000461159 NLRP3Q96P20 1036 aa9.89□□□□□ -0.83
HDAC9-219ENST00000461159 CAMKK2Q96RR4 588 aa9.89□□□□□ -0.83
HDAC9-219ENST00000461159 ANO2Q9NQ90 1003 aa9.89□□□□□ -0.83
HDAC9-219ENST00000461159 SMC3Q9UQE7 1217 aa9.89□□□□□ -0.83
HDAC9-219ENST00000461159 C4AP0C0L4 1744 aa9.89□□□□□ -0.83
HDAC9-219ENST00000461159 UBR3Q6ZT12 1888 aa9.89□□□□□ -0.83
HDAC9-219ENST00000461159 EPB41L2O43491 1005 aaKnown RBP9.89□□□□□ -0.83
HDAC9-219ENST00000461159 SF3B2Q13435 895 aaKnown RBP9.89□□□□□ -0.83
HDAC9-219ENST00000461159 GORABQ5T7V8 394 aa9.89□□□□□ -0.83
HDAC9-219ENST00000461159 PRR5LQ6MZQ0 368 aa9.89□□□□□ -0.83
HDAC9-219ENST00000461159 CWC27Q6UX04 472 aaKnown RBP9.89□□□□□ -0.83
HDAC9-219ENST00000461159 IQSEC3Q9UPP2 1182 aaPredicted RBP9.89□□□□□ -0.83
HDAC9-219ENST00000461159 CARMIL3Q8ND23 1372 aa9.89□□□□□ -0.83
HDAC9-219ENST00000461159 BCORQ6W2J9 1755 aa9.88□□□□□ -0.83
HDAC9-219ENST00000461159 CCDC196A0A1B0GTZ2 297 aa9.88□□□□□ -0.83
HDAC9-219ENST00000461159 ANKRD33BA6NCL7 494 aa9.88□□□□□ -0.83
HDAC9-219ENST00000461159 GLRX3O76003 335 aaKnown RBP9.88□□□□□ -0.83
HDAC9-219ENST00000461159 CASQ1P31415 396 aa9.88□□□□□ -0.83
HDAC9-219ENST00000461159 RAD51AP2Q09MP3 1159 aa9.88□□□□□ -0.83
HDAC9-219ENST00000461159 NOLC1Q14978 699 aaKnown RBP eCLIP9.88□□□□□ -0.83
HDAC9-219ENST00000461159 ZRSR2Q15696 482 aaKnown RBP9.88□□□□□ -0.83
HDAC9-219ENST00000461159 NOL8Q76FK4 1167 aaKnown RBP9.88□□□□□ -0.83
HDAC9-219ENST00000461159 USP48Q86UV5 1035 aa9.88□□□□□ -0.83
HDAC9-219ENST00000461159 IL17RAQ96F46 866 aa9.88□□□□□ -0.83
HDAC9-219ENST00000461159 CCDC97Q96F63 343 aaPredicted RBP9.88□□□□□ -0.83
HDAC9-219ENST00000461159 XAGE2Q96GT9 111 aa9.88□□□□□ -0.83
HDAC9-219ENST00000461159 SUDS3Q9H7L9 328 aaPredicted RBP9.88□□□□□ -0.83
HDAC9-219ENST00000461159 PNPLA7Q6ZV29 1317 aa9.88□□□□□ -0.83
HDAC9-219ENST00000461159 DDX60Q8IY21 1712 aaKnown RBP9.88□□□□□ -0.83
HDAC9-219ENST00000461159 TPM3P06753 285 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms