RNA–Protein interactions for RNA: ENST00000460633.1

HLA-DQA1-205, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 5,450 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-205ENST00000460633 TTC12Q9H892 705 aaPredicted RBP7.16□□□□□ -1.26
HLA-DQA1-205ENST00000460633 GGA1Q9UJY5 639 aa7.16□□□□□ -1.26
HLA-DQA1-205ENST00000460633 LRFN2Q9ULH4 789 aa7.16□□□□□ -1.26
HLA-DQA1-205ENST00000460633 ANKRD26Q9UPS8 1709 aa7.16□□□□□ -1.26
HLA-DQA1-205ENST00000460633 RNMTO43148 476 aaKnown RBP7.15□□□□□ -1.26
HLA-DQA1-205ENST00000460633 SMARCA5O60264 1052 aaPredicted RBP7.15□□□□□ -1.26
HLA-DQA1-205ENST00000460633 GTF2F1P35269 517 aaKnown RBP eCLIP7.15□□□□□ -1.26
HLA-DQA1-205ENST00000460633 TMPOP42166 694 aaKnown RBP7.15□□□□□ -1.26
HLA-DQA1-205ENST00000460633 IMMTQ16891 758 aaKnown RBP7.15□□□□□ -1.26
HLA-DQA1-205ENST00000460633 UBXN4Q92575 508 aa7.15□□□□□ -1.26
HLA-DQA1-205ENST00000460633 GOLGA1Q92805 767 aa7.15□□□□□ -1.26
HLA-DQA1-205ENST00000460633 FAM193BQ96PV7 902 aaPredicted RBP7.15□□□□□ -1.26
HLA-DQA1-205ENST00000460633 SERPINC1P01008 464 aa7.15□□□□□ -1.26
HLA-DQA1-205ENST00000460633 DDX12PQ92771 950 aa7.15□□□□□ -1.26
HLA-DQA1-205ENST00000460633 DCDC2CA8MYV0 355 aa7.15□□□□□ -1.26
HLA-DQA1-205ENST00000460633 ARID5AQ03989 594 aa7.15□□□□□ -1.26
HLA-DQA1-205ENST00000460633 DLGAP5Q15398 846 aa7.15□□□□□ -1.26
HLA-DQA1-205ENST00000460633 NUDT18Q6ZVK8 323 aa7.15□□□□□ -1.26
HLA-DQA1-205ENST00000460633 CAGE1Q8TC20 777 aa7.15□□□□□ -1.26
HLA-DQA1-205ENST00000460633 GCNAQ96QF7 691 aa7.15□□□□□ -1.26
HLA-DQA1-205ENST00000460633 STK25O00506 426 aa7.15□□□□□ -1.27
HLA-DQA1-205ENST00000460633 KIF4BQ2VIQ3 1234 aa7.15□□□□□ -1.27
HLA-DQA1-205ENST00000460633 CCDC93Q567U6 631 aa7.15□□□□□ -1.27
HLA-DQA1-205ENST00000460633 CABLES1Q8TDN4 633 aa7.15□□□□□ -1.27
HLA-DQA1-205ENST00000460633 COA7Q96BR5 231 aa7.15□□□□□ -1.27
HLA-DQA1-205ENST00000460633 COMMD10Q9Y6G5 202 aa7.15□□□□□ -1.27
HLA-DQA1-205ENST00000460633 KDM4AO75164 1064 aa7.14□□□□□ -1.27
HLA-DQA1-205ENST00000460633 CALML3P27482 149 aa7.14□□□□□ -1.27
HLA-DQA1-205ENST00000460633 DNM2P50570 870 aa7.14□□□□□ -1.27
HLA-DQA1-205ENST00000460633 TIGD1Q96MW7 591 aa7.14□□□□□ -1.27
HLA-DQA1-205ENST00000460633 UPF3BQ9BZI7 483 aaKnown RBP7.14□□□□□ -1.27
HLA-DQA1-205ENST00000460633 PDRG1Q9NUG6 133 aa7.14□□□□□ -1.27
HLA-DQA1-205ENST00000460633 CLIP2Q9UDT6 1046 aa7.14□□□□□ -1.27
HLA-DQA1-205ENST00000460633 CD2APQ9Y5K6 639 aa7.14□□□□□ -1.27
HLA-DQA1-205ENST00000460633 SLC4A2P04920 1241 aa7.14□□□□□ -1.27
HLA-DQA1-205ENST00000460633 RAB3GAP1Q15042 981 aa7.14□□□□□ -1.27
HLA-DQA1-205ENST00000460633 C2CD5Q86YS7 1000 aa7.14□□□□□ -1.27
HLA-DQA1-205ENST00000460633 TRMT1Q9NXH9 659 aaKnown RBP7.14□□□□□ -1.27
HLA-DQA1-205ENST00000460633 NIP7Q9Y221 180 aaKnown RBP eCLIP7.14□□□□□ -1.27
HLA-DQA1-205ENST00000460633 RNF123Q5XPI4 1314 aa7.14□□□□□ -1.27
HLA-DQA1-205ENST00000460633 PPIP5K2O43314 1243 aa7.14□□□□□ -1.27
HLA-DQA1-205ENST00000460633 TRIM27P14373 513 aa7.14□□□□□ -1.27
HLA-DQA1-205ENST00000460633 COPB2P35606 906 aa7.14□□□□□ -1.27
HLA-DQA1-205ENST00000460633 KIF18AQ8NI77 898 aa7.14□□□□□ -1.27
HLA-DQA1-205ENST00000460633 ACSBG1Q96GR2 724 aa7.14□□□□□ -1.27
HLA-DQA1-205ENST00000460633 EYA1Q99502 592 aa7.14□□□□□ -1.27
HLA-DQA1-205ENST00000460633 PTPRCP08575 1304 aa7.14□□□□□ -1.27
HLA-DQA1-205ENST00000460633 NAP1L1P55209 391 aaKnown RBP7.14□□□□□ -1.27
HLA-DQA1-205ENST00000460633 UVSSAQ2YD98 709 aa7.14□□□□□ -1.27
HLA-DQA1-205ENST00000460633 GOPCQ9HD26 462 aa7.14□□□□□ -1.27
HLA-DQA1-205ENST00000460633 DBF4Q9UBU7 674 aaPredicted RBP7.14□□□□□ -1.27
HLA-DQA1-205ENST00000460633 TPCN1Q9ULQ1 816 aa7.14□□□□□ -1.27
HLA-DQA1-205ENST00000460633 NFKBIAP25963 317 aa7.14□□□□□ -1.27
HLA-DQA1-205ENST00000460633 SMC1AQ14683 1233 aaKnown RBP7.14□□□□□ -1.27
HLA-DQA1-205ENST00000460633 NBPF20Q3BBV1 942 aa7.14□□□□□ -1.27
HLA-DQA1-205ENST00000460633 CCDC14Q49A88 953 aa7.14□□□□□ -1.27
HLA-DQA1-205ENST00000460633 BMP2KLQ5H9B9 411 aa7.14□□□□□ -1.27
HLA-DQA1-205ENST00000460633 JAKMIP3Q5VZ66 844 aa7.14□□□□□ -1.27
HLA-DQA1-205ENST00000460633 SNX21Q969T3 373 aa7.14□□□□□ -1.27
HLA-DQA1-205ENST00000460633 EVA1BQ9NVM1 165 aa7.14□□□□□ -1.27
HLA-DQA1-205ENST00000460633 COL22A1Q8NFW1 1626 aaPredicted RBP7.14□□□□□ -1.27
HLA-DQA1-205ENST00000460633 ME1P48163 572 aa7.13□□□□□ -1.27
HLA-DQA1-205ENST00000460633 GABPB2Q8TAK5 448 aaPredicted RBP7.13□□□□□ -1.27
HLA-DQA1-205ENST00000460633 SLC16A10Q8TF71 515 aa7.13□□□□□ -1.27
HLA-DQA1-205ENST00000460633 GTF3C2Q8WUA4 911 aaPredicted RBP7.13□□□□□ -1.27
HLA-DQA1-205ENST00000460633 DDX11Q96FC9 970 aa7.13□□□□□ -1.27
HLA-DQA1-205ENST00000460633 ZBED2Q9BTP6 218 aa7.13□□□□□ -1.27
HLA-DQA1-205ENST00000460633 IMPG2Q9BZV3 1241 aa7.13□□□□□ -1.27
HLA-DQA1-205ENST00000460633 SEPT11Q9NVA2 429 aaKnown RBP7.13□□□□□ -1.27
HLA-DQA1-205ENST00000460633 CD163L1Q9NR16 1453 aa7.13□□□□□ -1.27
HLA-DQA1-205ENST00000460633 EIF3JO75822 258 aaKnown RBP7.13□□□□□ -1.27
HLA-DQA1-205ENST00000460633 FERMT3Q86UX7 667 aa7.13□□□□□ -1.27
HLA-DQA1-205ENST00000460633 JAKMIP1Q96N16 626 aaKnown RBP7.13□□□□□ -1.27
HLA-DQA1-205ENST00000460633 ZHX3Q9H4I2 956 aa7.13□□□□□ -1.27
HLA-DQA1-205ENST00000460633 SLC52A2Q9HAB3 445 aa7.13□□□□□ -1.27
HLA-DQA1-205ENST00000460633 PIM2Q9P1W9 311 aa7.13□□□□□ -1.27
HLA-DQA1-205ENST00000460633 KRT10P13645 584 aa7.13□□□□□ -1.27
HLA-DQA1-205ENST00000460633 STK38Q15208 465 aa7.13□□□□□ -1.27
HLA-DQA1-205ENST00000460633 MCTP2Q6DN12 878 aa7.13□□□□□ -1.27
HLA-DQA1-205ENST00000460633 CCDC83Q8IWF9 413 aa7.13□□□□□ -1.27
HLA-DQA1-205ENST00000460633 CCDC102AQ96A19 550 aa7.13□□□□□ -1.27
HLA-DQA1-205ENST00000460633 ERLIN1O75477 346 aa7.13□□□□□ -1.27
HLA-DQA1-205ENST00000460633 HCLS1P14317 486 aaPredicted RBP7.13□□□□□ -1.27
HLA-DQA1-205ENST00000460633 TNS2Q63HR2 1409 aa7.13□□□□□ -1.27
HLA-DQA1-205ENST00000460633 CWC27Q6UX04 472 aaKnown RBP7.13□□□□□ -1.27
HLA-DQA1-205ENST00000460633 VPS36Q86VN1 386 aa7.13□□□□□ -1.27
HLA-DQA1-205ENST00000460633 DZIP3Q86Y13 1208 aaKnown RBP7.13□□□□□ -1.27
HLA-DQA1-205ENST00000460633 EXOC8Q8IYI6 725 aa7.13□□□□□ -1.27
HLA-DQA1-205ENST00000460633 CARD14Q9BXL6 1004 aa7.13□□□□□ -1.27
HLA-DQA1-205ENST00000460633 NAPBQ9H115 298 aa7.13□□□□□ -1.27
HLA-DQA1-205ENST00000460633 RAB11FIP3O75154 756 aa7.12□□□□□ -1.27
HLA-DQA1-205ENST00000460633 PHKG2P15735 406 aa7.12□□□□□ -1.27
HLA-DQA1-205ENST00000460633 CNGA1P29973 690 aa7.12□□□□□ -1.27
HLA-DQA1-205ENST00000460633 GBP2P32456 591 aaPredicted RBP7.12□□□□□ -1.27
HLA-DQA1-205ENST00000460633 USP14P54578 494 aa7.12□□□□□ -1.27
HLA-DQA1-205ENST00000460633 BRPF1P55201 1214 aaPredicted RBP7.12□□□□□ -1.27
HLA-DQA1-205ENST00000460633 CATIPQ7Z7H3 387 aa7.12□□□□□ -1.27
HLA-DQA1-205ENST00000460633 SMC5Q8IY18 1101 aa7.12□□□□□ -1.27
HLA-DQA1-205ENST00000460633 CCDC148Q8NFR7 591 aa7.12□□□□□ -1.27
HLA-DQA1-205ENST00000460633 KAT14Q9H8E8 782 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms