RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 ZKSCAN5Q9Y2L8 839 aa19.56■□□□□ 0.72
CCDC43-202ENST00000457422 TIAM2Q8IVF5 1701 aa19.56■□□□□ 0.72
CCDC43-202ENST00000457422 COL4A1P02462 1669 aa19.56■□□□□ 0.72
CCDC43-202ENST00000457422 MAP3K12Q12852 859 aa19.55■□□□□ 0.72
CCDC43-202ENST00000457422 AIDAQ96BJ3 306 aa19.55■□□□□ 0.72
CCDC43-202ENST00000457422 CLSTN2Q9H4D0 955 aa19.55■□□□□ 0.72
CCDC43-202ENST00000457422 SCN7AQ01118 1682 aa19.55■□□□□ 0.72
CCDC43-202ENST00000457422 APPP05067 770 aa19.55■□□□□ 0.72
CCDC43-202ENST00000457422 ZNF396Q96N95 335 aaPredicted RBP19.55■□□□□ 0.72
CCDC43-202ENST00000457422 DENND2AQ9ULE3 1009 aa19.55■□□□□ 0.72
CCDC43-202ENST00000457422 GUCY1B3Q02153 619 aa19.54■□□□□ 0.72
CCDC43-202ENST00000457422 MAGEB6Q8N7X4 407 aa19.54■□□□□ 0.72
CCDC43-202ENST00000457422 ZNF500O60304 480 aaPredicted RBP19.53■□□□□ 0.72
CCDC43-202ENST00000457422 RAB11FIP4Q86YS3 637 aa19.53■□□□□ 0.72
CCDC43-202ENST00000457422 BICD2Q8TD16 824 aa19.53■□□□□ 0.72
CCDC43-202ENST00000457422 TNMDQ9H2S6 317 aa19.53■□□□□ 0.72
CCDC43-202ENST00000457422 USP25Q9UHP3 1055 aa19.53■□□□□ 0.72
CCDC43-202ENST00000457422 ANGEL1Q9UNK9 670 aaKnown RBP19.53■□□□□ 0.72
CCDC43-202ENST00000457422 PATL2C9JE40 543 aaKnown RBP19.53■□□□□ 0.72
CCDC43-202ENST00000457422 TOM1O60784 492 aa19.53■□□□□ 0.72
CCDC43-202ENST00000457422 KDM4AO75164 1064 aa19.53■□□□□ 0.72
CCDC43-202ENST00000457422 BCAMP50895 628 aa19.53■□□□□ 0.72
CCDC43-202ENST00000457422 CHRNDQ07001 517 aa19.53■□□□□ 0.72
CCDC43-202ENST00000457422 CAMK4Q16566 473 aa19.53■□□□□ 0.72
CCDC43-202ENST00000457422 NKX2-3Q8TAU0 364 aa19.53■□□□□ 0.72
CCDC43-202ENST00000457422 CDC5LQ99459 802 aaKnown RBP19.53■□□□□ 0.72
CCDC43-202ENST00000457422 MBD4O95243 580 aa19.52■□□□□ 0.72
CCDC43-202ENST00000457422 CEBPZQ03701 1054 aaKnown RBP19.52■□□□□ 0.72
CCDC43-202ENST00000457422 CYB5R4Q7L1T6 521 aa19.52■□□□□ 0.72
CCDC43-202ENST00000457422 ILDR1Q86SU0 546 aaPredicted RBP19.52■□□□□ 0.72
CCDC43-202ENST00000457422 CNTNAP4Q9C0A0 1308 aa19.52■□□□□ 0.72
CCDC43-202ENST00000457422 SH2B2O14492 632 aaPredicted RBP19.52■□□□□ 0.71
CCDC43-202ENST00000457422 NR1I2O75469 434 aa19.52■□□□□ 0.71
CCDC43-202ENST00000457422 KCNQ4P56696 695 aa19.52■□□□□ 0.71
CCDC43-202ENST00000457422 TYRO3Q06418 890 aa19.52■□□□□ 0.71
CCDC43-202ENST00000457422 TMEM87BQ96K49 555 aa19.52■□□□□ 0.71
CCDC43-202ENST00000457422 USP28Q96RU2 1077 aa19.52■□□□□ 0.71
CCDC43-202ENST00000457422 FTOQ9C0B1 505 aaKnown RBP eCLIP19.52■□□□□ 0.71
CCDC43-202ENST00000457422 EPB41L4AQ9HCS5 686 aaPredicted RBP19.52■□□□□ 0.71
CCDC43-202ENST00000457422 PNPLA7Q6ZV29 1317 aa19.51■□□□□ 0.71
CCDC43-202ENST00000457422 SF3B3Q15393 1217 aaKnown RBP19.51■□□□□ 0.71
CCDC43-202ENST00000457422 VPS72Q15906 364 aa19.51■□□□□ 0.71
CCDC43-202ENST00000457422 ERFEQ4G0M1 354 aa19.51■□□□□ 0.71
CCDC43-202ENST00000457422 C3orf67Q6ZVT6 689 aa19.51■□□□□ 0.71
CCDC43-202ENST00000457422 IFNL3Q8IZI9 196 aa19.51■□□□□ 0.71
CCDC43-202ENST00000457422 FAM200AQ8TCP9 573 aa19.51■□□□□ 0.71
CCDC43-202ENST00000457422 MRVI1Q9Y6F6 885 aa19.51■□□□□ 0.71
CCDC43-202ENST00000457422 NEDD4P46934 1319 aa19.51■□□□□ 0.71
CCDC43-202ENST00000457422 ADCY5O95622 1261 aa19.5■□□□□ 0.71
CCDC43-202ENST00000457422 C8orf37Q96NL8 207 aa19.5■□□□□ 0.71
CCDC43-202ENST00000457422 ARMT1Q9H993 441 aa19.5■□□□□ 0.71
CCDC43-202ENST00000457422 ZNF804BA4D1E1 1349 aa19.5■□□□□ 0.71
CCDC43-202ENST00000457422 CPLX1O14810 134 aa19.5■□□□□ 0.71
CCDC43-202ENST00000457422 GNAT2P19087 354 aa19.5■□□□□ 0.71
CCDC43-202ENST00000457422 FBXO18Q8NFZ0 1043 aa19.5■□□□□ 0.71
CCDC43-202ENST00000457422 C8orf76Q96K31 380 aa19.5■□□□□ 0.71
CCDC43-202ENST00000457422 ORC3Q9UBD5 711 aaPredicted RBP19.5■□□□□ 0.71
CCDC43-202ENST00000457422 B4E1Z4 1266 aa19.49■□□□□ 0.71
CCDC43-202ENST00000457422 COL24A1Q17RW2 1714 aa19.49■□□□□ 0.71
CCDC43-202ENST00000457422 OTUD7BQ6GQQ9 843 aa19.48■□□□□ 0.71
CCDC43-202ENST00000457422 SGMS1Q86VZ5 419 aa19.48■□□□□ 0.71
CCDC43-202ENST00000457422 CKAP2LQ8IYA6 745 aa19.48■□□□□ 0.71
CCDC43-202ENST00000457422 NAPBQ9H115 298 aa19.48■□□□□ 0.71
CCDC43-202ENST00000457422 RTEL1Q9NZ71 1219 aa19.48■□□□□ 0.71
CCDC43-202ENST00000457422 GSG1L2A8MUP6 293 aa19.48■□□□□ 0.71
CCDC43-202ENST00000457422 PTMAP06454 111 aaKnown RBP19.48■□□□□ 0.71
CCDC43-202ENST00000457422 PTF1AQ7RTS3 328 aa19.48■□□□□ 0.71
CCDC43-202ENST00000457422 IGDCC4Q8TDY8 1250 aa19.48■□□□□ 0.71
CCDC43-202ENST00000457422 APOA5Q6Q788 366 aa19.47■□□□□ 0.71
CCDC43-202ENST00000457422 SMIM5Q71RC9 77 aa19.47■□□□□ 0.71
CCDC43-202ENST00000457422 BRAPQ7Z569 592 aa19.47■□□□□ 0.71
CCDC43-202ENST00000457422 ANKRD18AQ8IVF6 992 aa19.47■□□□□ 0.71
CCDC43-202ENST00000457422 NGLY1Q96IV0 654 aa19.47■□□□□ 0.71
CCDC43-202ENST00000457422 CNNM2Q9H8M5 875 aa19.47■□□□□ 0.71
CCDC43-202ENST00000457422 ECM29Q5VYK3 1845 aa19.47■□□□□ 0.71
CCDC43-202ENST00000457422 CTAGE5O15320 804 aa19.47■□□□□ 0.71
CCDC43-202ENST00000457422 CDKL5O76039 1030 aa19.47■□□□□ 0.71
CCDC43-202ENST00000457422 METAP2P50579 478 aaKnown RBP eCLIP19.47■□□□□ 0.71
CCDC43-202ENST00000457422 UBE4AQ14139 1066 aa19.47■□□□□ 0.71
CCDC43-202ENST00000457422 SLC10A5Q5PT55 438 aa19.47■□□□□ 0.71
CCDC43-202ENST00000457422 BICDL1Q6ZP65 573 aa19.47■□□□□ 0.71
CCDC43-202ENST00000457422 LCORLQ8N3X6 602 aa19.47■□□□□ 0.71
CCDC43-202ENST00000457422 SENP2Q9HC62 589 aa19.47■□□□□ 0.71
CCDC43-202ENST00000457422 INCENPQ9NQS7 918 aa19.47■□□□□ 0.71
CCDC43-202ENST00000457422 BSDC1Q9NW68 430 aaPredicted RBP19.47■□□□□ 0.71
CCDC43-202ENST00000457422 BTAF1O14981 1849 aa19.46■□□□□ 0.71
CCDC43-202ENST00000457422 PRKAB2O43741 272 aa19.46■□□□□ 0.71
CCDC43-202ENST00000457422 OFD1O75665 1012 aa19.46■□□□□ 0.71
CCDC43-202ENST00000457422 LIFRP42702 1097 aa19.46■□□□□ 0.71
CCDC43-202ENST00000457422 CTDSPL2Q05D32 466 aa19.46■□□□□ 0.71
CCDC43-202ENST00000457422 RC3H1Q5TC82 1133 aaKnown RBP19.46■□□□□ 0.71
CCDC43-202ENST00000457422 CCAR1Q8IX12 1150 aaKnown RBP19.46■□□□□ 0.71
CCDC43-202ENST00000457422 LY9Q9HBG7 655 aa19.46■□□□□ 0.71
CCDC43-202ENST00000457422 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.46■□□□□ 0.71
CCDC43-202ENST00000457422 TAF1P21675 1872 aa19.46■□□□□ 0.71
CCDC43-202ENST00000457422 NHSQ6T4R5 1651 aa19.46■□□□□ 0.71
CCDC43-202ENST00000457422 CAVIN2O95810 425 aa19.45■□□□□ 0.7
CCDC43-202ENST00000457422 AKNAD1Q5T1N1 836 aa19.45■□□□□ 0.7
CCDC43-202ENST00000457422 TBC1D9BQ66K14 1250 aa19.45■□□□□ 0.7
CCDC43-202ENST00000457422 NACAP1Q9BZK3 213 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms