RNA–Protein interactions for RNA: ENST00000456522.1

PTCHD1-202, Transcript of patched domain containing 1, humanhuman

TSL 1 (best)

Gene PTCHD1, Length 736 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-202ENST00000456522 CFAP99D6REC4 459 aa11.64□□□□□ -0.55
PTCHD1-202ENST00000456522 SURF6O75683 361 aaKnown RBP11.64□□□□□ -0.55
PTCHD1-202ENST00000456522 RFX5P48382 616 aaPredicted RBP11.64□□□□□ -0.55
PTCHD1-202ENST00000456522 OS9Q13438 667 aaPredicted RBP11.64□□□□□ -0.55
PTCHD1-202ENST00000456522 DDX46Q7L014 1031 aaKnown RBP11.64□□□□□ -0.55
PTCHD1-202ENST00000456522 C2CD5Q86YS7 1000 aa11.64□□□□□ -0.55
PTCHD1-202ENST00000456522 PRR14Q9BWN1 585 aa11.64□□□□□ -0.55
PTCHD1-202ENST00000456522 BCL11AQ9H165 835 aa11.64□□□□□ -0.55
PTCHD1-202ENST00000456522 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.64□□□□□ -0.55
PTCHD1-202ENST00000456522 C10orf71Q711Q0 1435 aa11.63□□□□□ -0.55
PTCHD1-202ENST00000456522 GPR37L1O60883 481 aa11.63□□□□□ -0.55
PTCHD1-202ENST00000456522 PTPN12Q05209 780 aaKnown RBP11.63□□□□□ -0.55
PTCHD1-202ENST00000456522 HELBQ8NG08 1087 aaPredicted RBP11.63□□□□□ -0.55
PTCHD1-202ENST00000456522 ZNF622Q969S3 477 aaKnown RBP eCLIP11.63□□□□□ -0.55
PTCHD1-202ENST00000456522 RBM17Q96I25 401 aaKnown RBP11.63□□□□□ -0.55
PTCHD1-202ENST00000456522 EXOC6BQ9Y2D4 811 aa11.63□□□□□ -0.55
PTCHD1-202ENST00000456522 COL11A2P13942 1736 aaPredicted RBP11.63□□□□□ -0.55
PTCHD1-202ENST00000456522 CACNA1SQ13698 1873 aa11.62□□□□□ -0.55
PTCHD1-202ENST00000456522 H0YIN7 160 aa11.62□□□□□ -0.55
PTCHD1-202ENST00000456522 CHRNA5P30532 468 aa11.62□□□□□ -0.55
PTCHD1-202ENST00000456522 G3BP1Q13283 466 aaKnown RBP eCLIP11.62□□□□□ -0.55
PTCHD1-202ENST00000456522 CRY2Q49AN0 593 aa11.62□□□□□ -0.55
PTCHD1-202ENST00000456522 CDC5LQ99459 802 aaKnown RBP11.62□□□□□ -0.55
PTCHD1-202ENST00000456522 TRIM34Q9BYJ4 488 aa11.62□□□□□ -0.55
PTCHD1-202ENST00000456522 PUS3Q9BZE2 481 aaKnown RBP11.62□□□□□ -0.55
PTCHD1-202ENST00000456522 DCTPP1Q9H773 170 aa11.62□□□□□ -0.55
PTCHD1-202ENST00000456522 COPRSQ9NQ92 184 aa11.62□□□□□ -0.55
PTCHD1-202ENST00000456522 CNNM1Q9NRU3 951 aa11.62□□□□□ -0.55
PTCHD1-202ENST00000456522 NDUFB9Q9Y6M9 179 aa11.62□□□□□ -0.55
PTCHD1-202ENST00000456522 RTL9Q8NET4 1388 aa11.62□□□□□ -0.55
PTCHD1-202ENST00000456522 KIF13BQ9NQT8 1826 aa11.61□□□□□ -0.55
PTCHD1-202ENST00000456522 KLRG2A4D1S0 409 aaPredicted RBP11.61□□□□□ -0.55
PTCHD1-202ENST00000456522 SOWAHBA6NEL2 793 aa11.61□□□□□ -0.55
PTCHD1-202ENST00000456522 SRGNP10124 158 aa11.61□□□□□ -0.55
PTCHD1-202ENST00000456522 NPR1P16066 1061 aa11.61□□□□□ -0.55
PTCHD1-202ENST00000456522 IGHMBP2P38935 993 aaKnown RBP11.61□□□□□ -0.55
PTCHD1-202ENST00000456522 CTDSPL2Q05D32 466 aa11.61□□□□□ -0.55
PTCHD1-202ENST00000456522 LRRC24Q50LG9 513 aa11.61□□□□□ -0.55
PTCHD1-202ENST00000456522 DESI1Q6ICB0 168 aa11.61□□□□□ -0.55
PTCHD1-202ENST00000456522 LDHAL6AQ6ZMR3 332 aa11.61□□□□□ -0.55
PTCHD1-202ENST00000456522 CENPQQ7L2Z9 268 aaPredicted RBP11.61□□□□□ -0.55
PTCHD1-202ENST00000456522 RETREG3Q86VR2 466 aa11.61□□□□□ -0.55
PTCHD1-202ENST00000456522 ANKRD18AQ8IVF6 992 aa11.61□□□□□ -0.55
PTCHD1-202ENST00000456522 CELF1Q92879 486 aaKnown RBP11.61□□□□□ -0.55
PTCHD1-202ENST00000456522 MPHOSPH8Q99549 860 aa11.61□□□□□ -0.55
PTCHD1-202ENST00000456522 HMX1Q9NP08 348 aaPredicted RBP11.61□□□□□ -0.55
PTCHD1-202ENST00000456522 COL4A1P02462 1669 aa11.61□□□□□ -0.55
PTCHD1-202ENST00000456522 A0A0G2JLW4 131 aa11.6□□□□□ -0.55
PTCHD1-202ENST00000456522 C6orf229H3BNL8 230 aa11.6□□□□□ -0.55
PTCHD1-202ENST00000456522 EYA2O00167 538 aa11.6□□□□□ -0.55
PTCHD1-202ENST00000456522 DPEP1P16444 411 aa11.6□□□□□ -0.55
PTCHD1-202ENST00000456522 HOXA10P31260 410 aaPredicted RBP11.6□□□□□ -0.55
PTCHD1-202ENST00000456522 RPS8P62241 208 aaKnown RBP11.6□□□□□ -0.55
PTCHD1-202ENST00000456522 GRAPQ13588 217 aa11.6□□□□□ -0.55
PTCHD1-202ENST00000456522 HSP90AB4PQ58FF6 505 aa11.6□□□□□ -0.55
PTCHD1-202ENST00000456522 GRAPLQ8TC17 118 aaPredicted RBP11.6□□□□□ -0.55
PTCHD1-202ENST00000456522 GCC1Q96CN9 775 aa11.6□□□□□ -0.55
PTCHD1-202ENST00000456522 MASTLQ96GX5 879 aa11.6□□□□□ -0.55
PTCHD1-202ENST00000456522 CRAMP1Q96RY5 1269 aa11.6□□□□□ -0.55
PTCHD1-202ENST00000456522 SERPINA10Q9UK55 444 aa11.6□□□□□ -0.55
PTCHD1-202ENST00000456522 NOP58Q9Y2X3 529 aaKnown RBP11.6□□□□□ -0.55
PTCHD1-202ENST00000456522 KDM2BQ8NHM5 1336 aa11.6□□□□□ -0.55
PTCHD1-202ENST00000456522 SMARCA5O60264 1052 aaPredicted RBP11.59□□□□□ -0.55
PTCHD1-202ENST00000456522 RNF40O75150 1001 aa11.59□□□□□ -0.55
PTCHD1-202ENST00000456522 Q3C1V9 767 aa11.59□□□□□ -0.55
PTCHD1-202ENST00000456522 ANKRD45Q5TZF3 282 aa11.59□□□□□ -0.55
PTCHD1-202ENST00000456522 STYK1Q6J9G0 422 aa11.59□□□□□ -0.55
PTCHD1-202ENST00000456522 ATG9AQ7Z3C6 839 aa11.59□□□□□ -0.55
PTCHD1-202ENST00000456522 SMC5Q8IY18 1101 aa11.59□□□□□ -0.55
PTCHD1-202ENST00000456522 ANKK1Q8NFD2 765 aa11.59□□□□□ -0.55
PTCHD1-202ENST00000456522 PDZRN3Q9UPQ7 1066 aa11.59□□□□□ -0.55
PTCHD1-202ENST00000456522 RAB11FIP3O75154 756 aa11.58□□□□□ -0.56
PTCHD1-202ENST00000456522 CIAO1O76071 339 aa11.58□□□□□ -0.56
PTCHD1-202ENST00000456522 SASH1O94885 1247 aa11.58□□□□□ -0.56
PTCHD1-202ENST00000456522 ALDH1B1P30837 517 aa11.58□□□□□ -0.56
PTCHD1-202ENST00000456522 IL15P40933 162 aaPredicted RBP11.58□□□□□ -0.56
PTCHD1-202ENST00000456522 IRF5Q13568 498 aa11.58□□□□□ -0.56
PTCHD1-202ENST00000456522 METTL24Q5JXM2 366 aa11.58□□□□□ -0.56
PTCHD1-202ENST00000456522 ARID3AQ99856 593 aa11.58□□□□□ -0.56
PTCHD1-202ENST00000456522 IL1RAPL2Q9NP60 686 aa11.58□□□□□ -0.56
PTCHD1-202ENST00000456522 WWC3Q9ULE0 1092 aa11.58□□□□□ -0.56
PTCHD1-202ENST00000456522 SLC27A5Q9Y2P5 690 aa11.58□□□□□ -0.56
PTCHD1-202ENST00000456522 RIPOR2Q9Y4F9 1068 aa11.58□□□□□ -0.56
PTCHD1-202ENST00000456522 CD2APQ9Y5K6 639 aa11.58□□□□□ -0.56
PTCHD1-202ENST00000456522 DLEC1Q9Y238 1755 aa11.57□□□□□ -0.56
PTCHD1-202ENST00000456522 PPEF1O14829 653 aaPredicted RBP11.57□□□□□ -0.56
PTCHD1-202ENST00000456522 BBOX1O75936 387 aa11.57□□□□□ -0.56
PTCHD1-202ENST00000456522 TGFB2P61812 414 aa11.57□□□□□ -0.56
PTCHD1-202ENST00000456522 TFCP2Q12800 502 aa11.57□□□□□ -0.56
PTCHD1-202ENST00000456522 SLC51AQ86UW1 340 aa11.57□□□□□ -0.56
PTCHD1-202ENST00000456522 ERC1Q8IUD2 1116 aa11.57□□□□□ -0.56
PTCHD1-202ENST00000456522 PRR7Q8TB68 274 aa11.57□□□□□ -0.56
PTCHD1-202ENST00000456522 RHPN1Q8TCX5 695 aa11.57□□□□□ -0.56
PTCHD1-202ENST00000456522 CNKSR1Q969H4 720 aa11.57□□□□□ -0.56
PTCHD1-202ENST00000456522 LRRCC1Q9C099 1032 aa11.57□□□□□ -0.56
PTCHD1-202ENST00000456522 BSDC1Q9NW68 430 aaPredicted RBP11.57□□□□□ -0.56
PTCHD1-202ENST00000456522 CEP126Q9P2H0 1117 aa11.57□□□□□ -0.56
PTCHD1-202ENST00000456522 SLX4Q8IY92 1834 aa11.57□□□□□ -0.56
PTCHD1-202ENST00000456522 KIAA1551Q9HCM1 1747 aa11.57□□□□□ -0.56
PTCHD1-202ENST00000456522 LRP5O75197 1615 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms