RNA–Protein interactions for RNA: ENST00000453996.6

CTU2-202, Transcript of cytosolic thiouridylase subunit 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTU2, Length 1,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTU2-202ENST00000453996 TDRD7Q8NHU6 1098 aaKnown RBP25.38■■□□□ 1.65
CTU2-202ENST00000453996 TBC1D16Q8TBP0 767 aa25.38■■□□□ 1.65
CTU2-202ENST00000453996 ARMT1Q9H993 441 aa25.38■■□□□ 1.65
CTU2-202ENST00000453996 SH2B1Q9NRF2 756 aaPredicted RBP25.37■■□□□ 1.65
CTU2-202ENST00000453996 NAA16Q6N069 864 aaPredicted RBP25.36■■□□□ 1.65
CTU2-202ENST00000453996 C2CD5Q86YS7 1000 aa25.36■■□□□ 1.65
CTU2-202ENST00000453996 TCEANC2Q96MN5 208 aa25.36■■□□□ 1.65
CTU2-202ENST00000453996 LARP6Q9BRS8 491 aaKnown RBP25.36■■□□□ 1.65
CTU2-202ENST00000453996 PATL2C9JE40 543 aaKnown RBP25.36■■□□□ 1.65
CTU2-202ENST00000453996 ZNF213O14771 459 aa25.36■■□□□ 1.65
CTU2-202ENST00000453996 RAB3GAP1Q15042 981 aa25.36■■□□□ 1.65
CTU2-202ENST00000453996 ALX1Q15699 326 aa25.36■■□□□ 1.65
CTU2-202ENST00000453996 TMED8Q6PL24 325 aaPredicted RBP25.36■■□□□ 1.65
CTU2-202ENST00000453996 LCORLQ8N3X6 602 aa25.36■■□□□ 1.65
CTU2-202ENST00000453996 POLLQ9UGP5 575 aa25.36■■□□□ 1.65
CTU2-202ENST00000453996 SALL1Q9NSC2 1324 aa25.35■■□□□ 1.65
CTU2-202ENST00000453996 HAND2P61296 217 aa25.35■■□□□ 1.65
CTU2-202ENST00000453996 SPTY2D1Q68D10 685 aaPredicted RBP25.35■■□□□ 1.65
CTU2-202ENST00000453996 ADGRA1Q86SQ6 560 aa25.35■■□□□ 1.65
CTU2-202ENST00000453996 MIGA1Q8NAN2 632 aa25.35■■□□□ 1.65
CTU2-202ENST00000453996 WDR66Q8TBY9 1149 aa25.35■■□□□ 1.65
CTU2-202ENST00000453996 CHD4Q14839 1912 aa25.34■■□□□ 1.65
CTU2-202ENST00000453996 MAGEB6P1A0A0J9YX57 407 aa25.34■■□□□ 1.65
CTU2-202ENST00000453996 H0YIN7 160 aa25.34■■□□□ 1.65
CTU2-202ENST00000453996 C6orf229H3BNL8 230 aa25.34■■□□□ 1.65
CTU2-202ENST00000453996 TOB2Q14106 344 aaPredicted RBP25.34■■□□□ 1.65
CTU2-202ENST00000453996 STYK1Q6J9G0 422 aa25.34■■□□□ 1.65
CTU2-202ENST00000453996 DHX32Q7L7V1 743 aaKnown RBP25.34■■□□□ 1.65
CTU2-202ENST00000453996 CCDC125Q86Z20 511 aa25.34■■□□□ 1.65
CTU2-202ENST00000453996 NSUN4Q96CB9 384 aaKnown RBP25.34■■□□□ 1.65
CTU2-202ENST00000453996 IGSF3O75054 1194 aa25.33■■□□□ 1.65
CTU2-202ENST00000453996 LARGE1O95461 756 aa25.33■■□□□ 1.65
CTU2-202ENST00000453996 ZNF622Q969S3 477 aaKnown RBP eCLIP25.33■■□□□ 1.65
CTU2-202ENST00000453996 TMX4Q9H1E5 349 aaPredicted RBP25.33■■□□□ 1.65
CTU2-202ENST00000453996 NUCB2P80303 420 aa25.33■■□□□ 1.65
CTU2-202ENST00000453996 MECOMQ03112 1051 aa25.33■■□□□ 1.65
CTU2-202ENST00000453996 IFNL3Q8IZI9 196 aa25.33■■□□□ 1.65
CTU2-202ENST00000453996 ZNF384Q8TF68 577 aa25.33■■□□□ 1.65
CTU2-202ENST00000453996 EPB41L4AQ9HCS5 686 aaPredicted RBP25.33■■□□□ 1.65
CTU2-202ENST00000453996 CD209Q9NNX6 404 aa25.33■■□□□ 1.65
CTU2-202ENST00000453996 TPCN1Q9ULQ1 816 aa25.33■■□□□ 1.65
CTU2-202ENST00000453996 SLC4A4Q9Y6R1 1079 aa25.33■■□□□ 1.65
CTU2-202ENST00000453996 GSG1L2A8MUP6 293 aa25.32■■□□□ 1.64
CTU2-202ENST00000453996 IL1R1P14778 569 aa25.32■■□□□ 1.64
CTU2-202ENST00000453996 PRDX5P30044 214 aa25.32■■□□□ 1.64
CTU2-202ENST00000453996 NACAP1Q9BZK3 213 aa25.32■■□□□ 1.64
CTU2-202ENST00000453996 PDGFDQ9GZP0 370 aaPredicted RBP25.32■■□□□ 1.64
CTU2-202ENST00000453996 NAPBQ9H115 298 aa25.32■■□□□ 1.64
CTU2-202ENST00000453996 JAG2Q9Y219 1238 aa25.32■■□□□ 1.64
CTU2-202ENST00000453996 TIAM2Q8IVF5 1701 aa25.31■■□□□ 1.64
CTU2-202ENST00000453996 Q6ZUG5 572 aa25.31■■□□□ 1.64
CTU2-202ENST00000453996 MPNDQ8N594 471 aa25.31■■□□□ 1.64
CTU2-202ENST00000453996 ZSCAN21Q9Y5A6 473 aaPredicted RBP25.31■■□□□ 1.64
CTU2-202ENST00000453996 ME3Q16798 604 aa25.31■■□□□ 1.64
CTU2-202ENST00000453996 RIOK1Q9BRS2 568 aaKnown RBP25.31■■□□□ 1.64
CTU2-202ENST00000453996 EXOSC10Q01780 885 aaKnown RBP25.3■■□□□ 1.64
CTU2-202ENST00000453996 DZIP1Q86YF9 867 aaKnown RBP25.3■■□□□ 1.64
CTU2-202ENST00000453996 SLC16A10Q8TF71 515 aa25.3■■□□□ 1.64
CTU2-202ENST00000453996 DLEC1Q9Y238 1755 aa25.29■■□□□ 1.64
CTU2-202ENST00000453996 PRKAB2O43741 272 aa25.29■■□□□ 1.64
CTU2-202ENST00000453996 TDO2P48775 406 aa25.29■■□□□ 1.64
CTU2-202ENST00000453996 FGD1P98174 961 aa25.29■■□□□ 1.64
CTU2-202ENST00000453996 DPP8Q6V1X1 898 aaPredicted RBP25.29■■□□□ 1.64
CTU2-202ENST00000453996 NCOA7Q8NI08 942 aa25.29■■□□□ 1.64
CTU2-202ENST00000453996 TNPO1Q92973 898 aaKnown RBP25.29■■□□□ 1.64
CTU2-202ENST00000453996 NBPF3Q9H094 633 aa25.29■■□□□ 1.64
CTU2-202ENST00000453996 SLX4Q8IY92 1834 aa25.29■■□□□ 1.64
CTU2-202ENST00000453996 LDHBP07195 334 aaKnown RBP25.28■■□□□ 1.64
CTU2-202ENST00000453996 RALYLQ86SE5 291 aaKnown RBP25.28■■□□□ 1.64
CTU2-202ENST00000453996 CCDC83Q8IWF9 413 aa25.28■■□□□ 1.64
CTU2-202ENST00000453996 C10orf71Q711Q0 1435 aa25.28■■□□□ 1.64
CTU2-202ENST00000453996 OLFM4Q6UX06 510 aa25.28■■□□□ 1.64
CTU2-202ENST00000453996 TBC1D10CQ8IV04 446 aa25.27■■□□□ 1.64
CTU2-202ENST00000453996 CNKSR1Q969H4 720 aa25.27■■□□□ 1.64
CTU2-202ENST00000453996 LRRC2Q9BYS8 371 aa25.27■■□□□ 1.64
CTU2-202ENST00000453996 CHRNA5P30532 468 aa25.26■■□□□ 1.63
CTU2-202ENST00000453996 DYNLL1P63167 89 aaKnown RBP25.26■■□□□ 1.63
CTU2-202ENST00000453996 TRDNQ13061 729 aa25.26■■□□□ 1.63
CTU2-202ENST00000453996 MB21D2Q8IYB1 491 aaPredicted RBP25.26■■□□□ 1.63
CTU2-202ENST00000453996 BRF1Q92994 677 aa25.26■■□□□ 1.63
CTU2-202ENST00000453996 AGXT2Q9BYV1 514 aa25.26■■□□□ 1.63
CTU2-202ENST00000453996 MCM5P33992 734 aa25.26■■□□□ 1.63
CTU2-202ENST00000453996 COA1Q9GZY4 146 aa25.26■■□□□ 1.63
CTU2-202ENST00000453996 SMC3Q9UQE7 1217 aa25.26■■□□□ 1.63
CTU2-202ENST00000453996 WDR19Q8NEZ3 1342 aa25.25■■□□□ 1.63
CTU2-202ENST00000453996 GSTO1P78417 241 aa25.25■■□□□ 1.63
CTU2-202ENST00000453996 ST3GAL1Q11201 340 aa25.25■■□□□ 1.63
CTU2-202ENST00000453996 PKP1Q13835 747 aa25.25■■□□□ 1.63
CTU2-202ENST00000453996 FBXL16Q8N461 479 aa25.25■■□□□ 1.63
CTU2-202ENST00000453996 NECAB1Q8N987 351 aa25.25■■□□□ 1.63
CTU2-202ENST00000453996 ZC3H12CQ9C0D7 883 aaKnown RBP25.25■■□□□ 1.63
CTU2-202ENST00000453996 RIMBP2O15034 1052 aa25.24■■□□□ 1.63
CTU2-202ENST00000453996 SDR42E1Q8WUS8 393 aa25.24■■□□□ 1.63
CTU2-202ENST00000453996 GBP4Q96PP9 640 aa25.24■■□□□ 1.63
CTU2-202ENST00000453996 MYH2Q9UKX2 1941 aa25.24■■□□□ 1.63
CTU2-202ENST00000453996 BAZ2AQ9UIF9 1905 aaKnown RBP25.23■■□□□ 1.63
CTU2-202ENST00000453996 PRC1O43663 620 aa25.23■■□□□ 1.63
CTU2-202ENST00000453996 TBC1D22AQ8WUA7 517 aa25.23■■□□□ 1.63
CTU2-202ENST00000453996 EYA3Q99504 573 aa25.23■■□□□ 1.63
CTU2-202ENST00000453996 AATFQ9NY61 560 aaKnown RBP eCLIP25.23■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms