RNA–Protein interactions for RNA: ENST00000452776.1

SMCO1-202, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

TSL 1 (best)

Gene SMCO1, Length 1,846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-202ENST00000452776 MAP3K4Q9Y6R4 1608 aa9.56□□□□□ -0.88
SMCO1-202ENST00000452776 KNDC1Q76NI1 1749 aa9.56□□□□□ -0.88
SMCO1-202ENST00000452776 CTAGE9A4FU28 777 aa9.56□□□□□ -0.88
SMCO1-202ENST00000452776 N4BP1O75113 896 aaKnown RBP9.56□□□□□ -0.88
SMCO1-202ENST00000452776 SNUPNO95149 360 aaKnown RBP9.56□□□□□ -0.88
SMCO1-202ENST00000452776 CCDC175P0C221 793 aa9.56□□□□□ -0.88
SMCO1-202ENST00000452776 PECAM1P16284 738 aaPredicted RBP9.56□□□□□ -0.88
SMCO1-202ENST00000452776 TBC1D8BQ0IIM8 1120 aa9.56□□□□□ -0.88
SMCO1-202ENST00000452776 RESTQ13127 1097 aa9.56□□□□□ -0.88
SMCO1-202ENST00000452776 SNCBQ16143 134 aa9.56□□□□□ -0.88
SMCO1-202ENST00000452776 PLEKHO1Q53GL0 409 aaPredicted RBP9.56□□□□□ -0.88
SMCO1-202ENST00000452776 NAA16Q6N069 864 aaPredicted RBP9.56□□□□□ -0.88
SMCO1-202ENST00000452776 CPLX2Q6PUV4 134 aaKnown RBP9.56□□□□□ -0.88
SMCO1-202ENST00000452776 APLFQ8IW19 511 aaPredicted RBP9.56□□□□□ -0.88
SMCO1-202ENST00000452776 DHX58Q96C10 678 aa9.56□□□□□ -0.88
SMCO1-202ENST00000452776 HOOK2Q96ED9 719 aa9.56□□□□□ -0.88
SMCO1-202ENST00000452776 LLPHQ9BRT6 129 aaKnown RBP9.56□□□□□ -0.88
SMCO1-202ENST00000452776 SOS1Q07889 1333 aaPredicted RBP9.55□□□□□ -0.88
SMCO1-202ENST00000452776 HECW2Q9P2P5 1572 aa9.55□□□□□ -0.88
SMCO1-202ENST00000452776 PPFIA3O75145 1194 aa9.55□□□□□ -0.88
SMCO1-202ENST00000452776 SYF2O95926 243 aaKnown RBP9.55□□□□□ -0.88
SMCO1-202ENST00000452776 SERPINC1P01008 464 aa9.55□□□□□ -0.88
SMCO1-202ENST00000452776 PAX7P23759 505 aa9.55□□□□□ -0.88
SMCO1-202ENST00000452776 HSP90AB4PQ58FF6 505 aa9.55□□□□□ -0.88
SMCO1-202ENST00000452776 FERMT3Q86UX7 667 aa9.55□□□□□ -0.88
SMCO1-202ENST00000452776 ARHGEF25Q86VW2 580 aa9.55□□□□□ -0.88
SMCO1-202ENST00000452776 IGSF22Q8N9C0 903 aa9.55□□□□□ -0.88
SMCO1-202ENST00000452776 C3orf20Q8ND61 904 aa9.55□□□□□ -0.88
SMCO1-202ENST00000452776 P3H4Q92791 437 aa9.55□□□□□ -0.88
SMCO1-202ENST00000452776 EPC1Q9H2F5 836 aa9.55□□□□□ -0.88
SMCO1-202ENST00000452776 GLI2P10070 1586 aa9.55□□□□□ -0.88
SMCO1-202ENST00000452776 GOLGA6CA6NDK9 693 aa9.54□□□□□ -0.88
SMCO1-202ENST00000452776 ANKRD65E5RJM6 399 aa9.54□□□□□ -0.88
SMCO1-202ENST00000452776 GOLGA6DP0CG33 693 aa9.54□□□□□ -0.88
SMCO1-202ENST00000452776 PRKAR2BP31323 418 aa9.54□□□□□ -0.88
SMCO1-202ENST00000452776 SKOR1P84550 965 aa9.54□□□□□ -0.88
SMCO1-202ENST00000452776 ACTN3Q08043 901 aaPredicted RBP9.54□□□□□ -0.88
SMCO1-202ENST00000452776 CCDC40Q4G0X9 1142 aa9.54□□□□□ -0.88
SMCO1-202ENST00000452776 ADALQ6DHV7 355 aa9.54□□□□□ -0.88
SMCO1-202ENST00000452776 CCDC70Q6NSX1 233 aa9.54□□□□□ -0.88
SMCO1-202ENST00000452776 RASEFQ8IZ41 740 aa9.54□□□□□ -0.88
SMCO1-202ENST00000452776 C8orf58Q8NAV2 365 aa9.54□□□□□ -0.88
SMCO1-202ENST00000452776 KLHL23Q8NBE8 558 aa9.54□□□□□ -0.88
SMCO1-202ENST00000452776 MRPS27Q92552 414 aaKnown RBP9.54□□□□□ -0.88
SMCO1-202ENST00000452776 WDR24Q96S15 920 aa9.54□□□□□ -0.88
SMCO1-202ENST00000452776 GOLGA6AQ9NYA3 693 aa9.54□□□□□ -0.88
SMCO1-202ENST00000452776 RIMBP3CA6NJZ7 1639 aa9.54□□□□□ -0.88
SMCO1-202ENST00000452776 RIMBP3BA6NNM3 1639 aa9.54□□□□□ -0.88
SMCO1-202ENST00000452776 RIMBP3Q9UFD9 1639 aa9.54□□□□□ -0.88
SMCO1-202ENST00000452776 RASSF9O75901 435 aa9.54□□□□□ -0.88
SMCO1-202ENST00000452776 ARID4AP29374 1257 aaPredicted RBP9.54□□□□□ -0.88
SMCO1-202ENST00000452776 GBP2P32456 591 aaPredicted RBP9.54□□□□□ -0.88
SMCO1-202ENST00000452776 GCKP35557 465 aa9.54□□□□□ -0.88
SMCO1-202ENST00000452776 KRT32Q14532 448 aa9.54□□□□□ -0.88
SMCO1-202ENST00000452776 ZC3H12AQ5D1E8 599 aaKnown RBP9.54□□□□□ -0.88
SMCO1-202ENST00000452776 COG1Q8WTW3 980 aa9.54□□□□□ -0.88
SMCO1-202ENST00000452776 SYTL4Q96C24 671 aaPredicted RBP9.54□□□□□ -0.88
SMCO1-202ENST00000452776 MEIS3Q99687 375 aa9.54□□□□□ -0.88
SMCO1-202ENST00000452776 VCPKMTQ9H867 229 aa9.54□□□□□ -0.88
SMCO1-202ENST00000452776 PLCH2O75038 1416 aa9.53□□□□□ -0.88
SMCO1-202ENST00000452776 ARHGEF10O15013 1369 aa9.53□□□□□ -0.88
SMCO1-202ENST00000452776 MAP3K5Q99683 1374 aa9.53□□□□□ -0.88
SMCO1-202ENST00000452776 LIN7AO14910 233 aaPredicted RBP9.53□□□□□ -0.88
SMCO1-202ENST00000452776 PHACTR2O75167 634 aa9.53□□□□□ -0.88
SMCO1-202ENST00000452776 LARGE1O95461 756 aa9.53□□□□□ -0.88
SMCO1-202ENST00000452776 SLC3A2P08195 630 aaKnown RBP9.53□□□□□ -0.88
SMCO1-202ENST00000452776 MYBL2P10244 700 aa9.53□□□□□ -0.88
SMCO1-202ENST00000452776 EPB41P11171 864 aaKnown RBP9.53□□□□□ -0.88
SMCO1-202ENST00000452776 OS9Q13438 667 aaPredicted RBP9.53□□□□□ -0.88
SMCO1-202ENST00000452776 CCDC38Q502W7 563 aa9.53□□□□□ -0.88
SMCO1-202ENST00000452776 LARP1Q6PKG0 1096 aaKnown RBP9.53□□□□□ -0.88
SMCO1-202ENST00000452776 BLOC1S2Q6QNY1 142 aa9.53□□□□□ -0.88
SMCO1-202ENST00000452776 RPUSD2Q8IZ73 545 aaKnown RBP9.53□□□□□ -0.88
SMCO1-202ENST00000452776 PANX2Q96RD6 677 aa9.53□□□□□ -0.88
SMCO1-202ENST00000452776 HMG20BQ9P0W2 317 aa9.53□□□□□ -0.88
SMCO1-202ENST00000452776 TPCN1Q9ULQ1 816 aa9.53□□□□□ -0.88
SMCO1-202ENST00000452776 HPCAL4Q9UM19 191 aa9.53□□□□□ -0.88
SMCO1-202ENST00000452776 NDUFAB1O14561 156 aa9.52□□□□□ -0.89
SMCO1-202ENST00000452776 PFKFB2O60825 505 aa9.52□□□□□ -0.89
SMCO1-202ENST00000452776 COQ9O75208 318 aa9.52□□□□□ -0.89
SMCO1-202ENST00000452776 ATP5JP18859 108 aa9.52□□□□□ -0.89
SMCO1-202ENST00000452776 VSNL1P62760 191 aa9.52□□□□□ -0.89
SMCO1-202ENST00000452776 MYL5Q02045 173 aa9.52□□□□□ -0.89
SMCO1-202ENST00000452776 APBA1Q02410 837 aa9.52□□□□□ -0.89
SMCO1-202ENST00000452776 TBX2Q13207 712 aaPredicted RBP9.52□□□□□ -0.89
SMCO1-202ENST00000452776 NECTIN1Q15223 517 aa9.52□□□□□ -0.89
SMCO1-202ENST00000452776 SLC5A9Q2M3M2 681 aa9.52□□□□□ -0.89
SMCO1-202ENST00000452776 CFAP100Q494V2 611 aa9.52□□□□□ -0.89
SMCO1-202ENST00000452776 HSP90AB2PQ58FF8 381 aa9.52□□□□□ -0.89
SMCO1-202ENST00000452776 ALS2CLQ60I27 953 aa9.52□□□□□ -0.89
SMCO1-202ENST00000452776 TTC19Q6DKK2 380 aaPredicted RBP9.52□□□□□ -0.89
SMCO1-202ENST00000452776 IQCEQ6IPM2 695 aa9.52□□□□□ -0.89
SMCO1-202ENST00000452776 TLDC1Q6P9B6 456 aa9.52□□□□□ -0.89
SMCO1-202ENST00000452776 OLFM4Q6UX06 510 aa9.52□□□□□ -0.89
SMCO1-202ENST00000452776 PARP9Q8IXQ6 854 aa9.52□□□□□ -0.89
SMCO1-202ENST00000452776 FMR1NBQ8N0W7 255 aaPredicted RBP9.52□□□□□ -0.89
SMCO1-202ENST00000452776 FAM177A1Q8N128 213 aaPredicted RBP9.52□□□□□ -0.89
SMCO1-202ENST00000452776 FSIP1Q8NA03 581 aa9.52□□□□□ -0.89
SMCO1-202ENST00000452776 CCHCR1Q8TD31 782 aa9.52□□□□□ -0.89
SMCO1-202ENST00000452776 OSBPL9Q96SU4 736 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms