RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 WDHD1O75717 1129 aaPredicted RBP9.89□□□□□ -0.83
LSM5-208ENST00000450169 PTH1RQ03431 593 aa9.89□□□□□ -0.83
LSM5-208ENST00000450169 PRPF38AQ8NAV1 312 aaKnown RBP9.89□□□□□ -0.83
LSM5-208ENST00000450169 KCNB2Q92953 911 aa9.89□□□□□ -0.83
LSM5-208ENST00000450169 PCMTD1Q96MG8 357 aaPredicted RBP9.89□□□□□ -0.83
LSM5-208ENST00000450169 TERF2IPQ9NYB0 399 aa9.89□□□□□ -0.83
LSM5-208ENST00000450169 ZRANB1Q9UGI0 708 aa9.89□□□□□ -0.83
LSM5-208ENST00000450169 NEXMIFQ5QGS0 1516 aa9.89□□□□□ -0.83
LSM5-208ENST00000450169 F6X3S4 739 aa9.89□□□□□ -0.83
LSM5-208ENST00000450169 CUTAO60888 179 aa9.89□□□□□ -0.83
LSM5-208ENST00000450169 CCT5P48643 541 aa9.89□□□□□ -0.83
LSM5-208ENST00000450169 ATP8B2P98198 1209 aa9.89□□□□□ -0.83
LSM5-208ENST00000450169 DCTN1Q14203 1278 aa9.89□□□□□ -0.83
LSM5-208ENST00000450169 ENGASEQ8NFI3 743 aa9.89□□□□□ -0.83
LSM5-208ENST00000450169 CCDC12Q8WUD4 166 aaPredicted RBP9.89□□□□□ -0.83
LSM5-208ENST00000450169 UPF1Q92900 1129 aaKnown RBP eCLIP9.89□□□□□ -0.83
LSM5-208ENST00000450169 CABS1Q96KC9 395 aa9.89□□□□□ -0.83
LSM5-208ENST00000450169 FMNL2Q96PY5 1086 aa9.89□□□□□ -0.83
LSM5-208ENST00000450169 GBP3Q9H0R5 595 aa9.89□□□□□ -0.83
LSM5-208ENST00000450169 DLG5Q8TDM6 1919 aa9.89□□□□□ -0.83
LSM5-208ENST00000450169 INPP5BP32019 993 aa9.88□□□□□ -0.83
LSM5-208ENST00000450169 FANCCQ00597 558 aa9.88□□□□□ -0.83
LSM5-208ENST00000450169 DDR1Q08345 913 aa9.88□□□□□ -0.83
LSM5-208ENST00000450169 ANKRD1Q15327 319 aa9.88□□□□□ -0.83
LSM5-208ENST00000450169 CEP112Q8N8E3 955 aa9.88□□□□□ -0.83
LSM5-208ENST00000450169 RUFY2Q8WXA3 655 aa9.88□□□□□ -0.83
LSM5-208ENST00000450169 GOPCQ9HD26 462 aa9.88□□□□□ -0.83
LSM5-208ENST00000450169 MCM8Q9UJA3 840 aa9.88□□□□□ -0.83
LSM5-208ENST00000450169 H3BQV1 296 aa9.87□□□□□ -0.83
LSM5-208ENST00000450169 NEBLO76041 1014 aa9.87□□□□□ -0.83
LSM5-208ENST00000450169 ERCC3P19447 782 aa9.87□□□□□ -0.83
LSM5-208ENST00000450169 NF2P35240 595 aa9.87□□□□□ -0.83
LSM5-208ENST00000450169 RDXP35241 583 aaKnown RBP9.87□□□□□ -0.83
LSM5-208ENST00000450169 TUBB4BP68371 445 aa9.87□□□□□ -0.83
LSM5-208ENST00000450169 IFFO2Q5TF58 517 aa9.87□□□□□ -0.83
LSM5-208ENST00000450169 NUTM2DQ5VT03 806 aaPredicted RBP9.87□□□□□ -0.83
LSM5-208ENST00000450169 N4BP2L2Q92802 583 aaPredicted RBP9.87□□□□□ -0.83
LSM5-208ENST00000450169 SDF4Q9BRK5 362 aa9.87□□□□□ -0.83
LSM5-208ENST00000450169 VEZTQ9HBM0 779 aa9.87□□□□□ -0.83
LSM5-208ENST00000450169 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.87□□□□□ -0.834e-7■□□□□ 10.5
LSM5-208ENST00000450169 PUF60Q9UHX1 559 aaKnown RBP9.87□□□□□ -0.83
LSM5-208ENST00000450169 RCOR1Q9UKL0 485 aa9.87□□□□□ -0.83
LSM5-208ENST00000450169 LRRIQ3A6PVS8 624 aaPredicted RBP9.87□□□□□ -0.83
LSM5-208ENST00000450169 H0YHG0 523 aa9.87□□□□□ -0.83
LSM5-208ENST00000450169 SHOX2O60902 331 aaPredicted RBP9.87□□□□□ -0.83
LSM5-208ENST00000450169 GCFC2P16383 781 aaKnown RBP9.87□□□□□ -0.83
LSM5-208ENST00000450169 PSMA5P28066 241 aa9.87□□□□□ -0.83
LSM5-208ENST00000450169 LMOD1P29536 600 aaPredicted RBP9.87□□□□□ -0.83
LSM5-208ENST00000450169 VSNL1P62760 191 aa9.87□□□□□ -0.83
LSM5-208ENST00000450169 SARNPP82979 210 aaKnown RBP9.87□□□□□ -0.83
LSM5-208ENST00000450169 NECTIN1Q15223 517 aa9.87□□□□□ -0.83
LSM5-208ENST00000450169 TMEM139Q8IV31 216 aa9.87□□□□□ -0.83
LSM5-208ENST00000450169 PLPP6Q8IY26 295 aa9.87□□□□□ -0.83
LSM5-208ENST00000450169 TEX11Q8IYF3 940 aa9.87□□□□□ -0.83
LSM5-208ENST00000450169 FSIP1Q8NA03 581 aa9.87□□□□□ -0.83
LSM5-208ENST00000450169 CTCFLQ8NI51 663 aaPredicted RBP9.87□□□□□ -0.83
LSM5-208ENST00000450169 BRF1Q92994 677 aa9.87□□□□□ -0.83
LSM5-208ENST00000450169 SOS1Q07889 1333 aaPredicted RBP9.87□□□□□ -0.83
LSM5-208ENST00000450169 RPGRIP1LQ68CZ1 1315 aa9.87□□□□□ -0.83
LSM5-208ENST00000450169 PRPF6O94906 941 aaKnown RBP9.86□□□□□ -0.83
LSM5-208ENST00000450169 AARSP49588 968 aaKnown RBP eCLIP9.86□□□□□ -0.83
LSM5-208ENST00000450169 IRX1P78414 480 aaPredicted RBP9.86□□□□□ -0.83
LSM5-208ENST00000450169 FOXK1P85037 733 aa9.86□□□□□ -0.83
LSM5-208ENST00000450169 GOLGA8FQ08AF8 430 aa9.86□□□□□ -0.83
LSM5-208ENST00000450169 GOLGA8DPQ0D2H9 430 aa9.86□□□□□ -0.83
LSM5-208ENST00000450169 STK3Q13188 491 aa9.86□□□□□ -0.83
LSM5-208ENST00000450169 IDI1Q13907 227 aa9.86□□□□□ -0.83
LSM5-208ENST00000450169 NCAPHQ15003 741 aa9.86□□□□□ -0.83
LSM5-208ENST00000450169 PROSER2Q86WR7 435 aaPredicted RBP9.86□□□□□ -0.83
LSM5-208ENST00000450169 SMARCC1Q92922 1105 aaPredicted RBP9.86□□□□□ -0.83
LSM5-208ENST00000450169 KIAA1468Q9P260 1216 aa9.86□□□□□ -0.83
LSM5-208ENST00000450169 ARHGEF28Q8N1W1 1705 aaKnown RBP9.86□□□□□ -0.83
LSM5-208ENST00000450169 CLTCQ00610 1675 aaKnown RBP9.86□□□□□ -0.83
LSM5-208ENST00000450169 KLHL33A6NCF5 533 aa9.86□□□□□ -0.83
LSM5-208ENST00000450169 CBFA2T2O43439 604 aa9.86□□□□□ -0.83
LSM5-208ENST00000450169 TOP1P11387 765 aaKnown RBP9.86□□□□□ -0.83
LSM5-208ENST00000450169 ATP1A3P13637 1013 aa9.86□□□□□ -0.83
LSM5-208ENST00000450169 PAX7P23759 505 aa9.86□□□□□ -0.83
LSM5-208ENST00000450169 ADD1P35611 737 aaKnown RBP9.86□□□□□ -0.83
LSM5-208ENST00000450169 UBASH3AP57075 661 aa9.86□□□□□ -0.83
LSM5-208ENST00000450169 HIC1Q14526 733 aa9.86□□□□□ -0.83
LSM5-208ENST00000450169 NAIF1Q69YI7 327 aaPredicted RBP9.86□□□□□ -0.83
LSM5-208ENST00000450169 FAM43BQ6ZT52 329 aaPredicted RBP9.86□□□□□ -0.83
LSM5-208ENST00000450169 FMNL3Q8IVF7 1028 aa9.86□□□□□ -0.83
LSM5-208ENST00000450169 ZKSCAN4Q969J2 545 aaPredicted RBP9.86□□□□□ -0.83
LSM5-208ENST00000450169 BAG1Q99933 345 aaPredicted RBP9.86□□□□□ -0.83
LSM5-208ENST00000450169 FTOQ9C0B1 505 aaKnown RBP eCLIP9.86□□□□□ -0.83
LSM5-208ENST00000450169 VIPAS39Q9H9C1 493 aa9.86□□□□□ -0.83
LSM5-208ENST00000450169 CDHR2Q9BYE9 1310 aa9.85□□□□□ -0.83
LSM5-208ENST00000450169 CHUKO15111 745 aa9.85□□□□□ -0.83
LSM5-208ENST00000450169 JAK2O60674 1132 aa9.85□□□□□ -0.83
LSM5-208ENST00000450169 SYF2O95926 243 aaKnown RBP9.85□□□□□ -0.83
LSM5-208ENST00000450169 SERPINC1P01008 464 aa9.85□□□□□ -0.83
LSM5-208ENST00000450169 TUBBP07437 444 aa9.85□□□□□ -0.83
LSM5-208ENST00000450169 RHOXF2BP0C7M4 288 aa9.85□□□□□ -0.83
LSM5-208ENST00000450169 ME1P48163 572 aa9.85□□□□□ -0.83
LSM5-208ENST00000450169 CFAP100Q494V2 611 aa9.85□□□□□ -0.83
LSM5-208ENST00000450169 FBXO31Q5XUX0 539 aaPredicted RBP9.85□□□□□ -0.83
LSM5-208ENST00000450169 CREB3L3Q68CJ9 461 aa9.85□□□□□ -0.83
LSM5-208ENST00000450169 TOGARAM2Q6ZUX3 1019 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms