RNA–Protein interactions for RNA: ENST00000449082.2

SCN10A-201, Transcript of sodium voltage-gated channel alpha subunit 10, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN10A, Length 6,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10A-201ENST00000449082 MSANTD4Q8NCY6 345 aa11.55□□□□□ -0.56
SCN10A-201ENST00000449082 LMBR1Q8WVP7 490 aa11.55□□□□□ -0.56
SCN10A-201ENST00000449082 SLAIN2Q9P270 581 aa11.55□□□□□ -0.56
SCN10A-201ENST00000449082 XAGE2Q96GT9 111 aa11.54□□□□□ -0.56
SCN10A-201ENST00000449082 TMEM87BQ96K49 555 aa11.54□□□□□ -0.56
SCN10A-201ENST00000449082 FAM200AQ8TCP9 573 aa11.54□□□□□ -0.56
SCN10A-201ENST00000449082 TIMM10P62072 90 aa11.54□□□□□ -0.56
SCN10A-201ENST00000449082 LARGE2Q8N3Y3 721 aa11.54□□□□□ -0.56
SCN10A-201ENST00000449082 ZKSCAN3Q9BRR0 538 aa11.54□□□□□ -0.56
SCN10A-201ENST00000449082 MAATS1Q7Z4T9 603 aa11.54□□□□□ -0.56
SCN10A-201ENST00000449082 BIN2Q9UBW5 565 aaPredicted RBP11.54□□□□□ -0.56
SCN10A-201ENST00000449082 AOPEPQ8N6M6 819 aa11.54□□□□□ -0.56
SCN10A-201ENST00000449082 IQUBQ8NA54 791 aa11.54□□□□□ -0.56
SCN10A-201ENST00000449082 GPCPD1Q9NPB8 672 aa11.54□□□□□ -0.56
SCN10A-201ENST00000449082 CEP135Q66GS9 1140 aa11.53□□□□□ -0.56
SCN10A-201ENST00000449082 G2E3Q7L622 706 aa11.53□□□□□ -0.56
SCN10A-201ENST00000449082 RGS22Q8NE09 1264 aa11.53□□□□□ -0.56
SCN10A-201ENST00000449082 GLT8D2Q9H1C3 349 aa11.53□□□□□ -0.56
SCN10A-201ENST00000449082 RASAL2Q9UJF2 1139 aa11.53□□□□□ -0.56
SCN10A-201ENST00000449082 RXRAP19793 462 aa11.53□□□□□ -0.56
SCN10A-201ENST00000449082 CEP83Q9Y592 693 aa11.53□□□□□ -0.56
SCN10A-201ENST00000449082 KIF21AQ7Z4S6 1674 aa11.53□□□□□ -0.56
SCN10A-201ENST00000449082 DNMT1P26358 1616 aaKnown RBP11.53□□□□□ -0.56
SCN10A-201ENST00000449082 A1BGP04217 495 aa11.53□□□□□ -0.56
SCN10A-201ENST00000449082 CTR9Q6PD62 1173 aa11.53□□□□□ -0.56
SCN10A-201ENST00000449082 MICALCLQ6ZW33 695 aa11.53□□□□□ -0.56
SCN10A-201ENST00000449082 LPIN2Q92539 896 aa11.53□□□□□ -0.56
SCN10A-201ENST00000449082 ARMT1Q9H993 441 aa11.53□□□□□ -0.56
SCN10A-201ENST00000449082 TNNQ9UQP3 1299 aa11.53□□□□□ -0.56
SCN10A-201ENST00000449082 TACC1O75410 805 aa11.53□□□□□ -0.56
SCN10A-201ENST00000449082 CCDC175P0C221 793 aa11.53□□□□□ -0.56
SCN10A-201ENST00000449082 SP4Q02446 784 aa11.53□□□□□ -0.56
SCN10A-201ENST00000449082 HSP90AA4PQ58FG1 418 aa11.53□□□□□ -0.56
SCN10A-201ENST00000449082 ATL3Q6DD88 541 aa11.53□□□□□ -0.56
SCN10A-201ENST00000449082 CCDC65Q8IXS2 484 aa11.53□□□□□ -0.56
SCN10A-201ENST00000449082 NEK11Q8NG66 645 aa11.53□□□□□ -0.56
SCN10A-201ENST00000449082 RLBP1P12271 317 aa11.53□□□□□ -0.56
SCN10A-201ENST00000449082 RPL13P26373 211 aaKnown RBP11.53□□□□□ -0.56
SCN10A-201ENST00000449082 ALDH1B1P30837 517 aa11.53□□□□□ -0.56
SCN10A-201ENST00000449082 BRDTQ58F21 947 aaPredicted RBP11.53□□□□□ -0.56
SCN10A-201ENST00000449082 APPBP2Q92624 585 aa11.53□□□□□ -0.56
SCN10A-201ENST00000449082 PAXBP1Q9Y5B6 917 aa11.53□□□□□ -0.56
SCN10A-201ENST00000449082 MROH5Q6ZUA9 1318 aa11.52□□□□□ -0.56
SCN10A-201ENST00000449082 ECM2O94769 699 aaPredicted RBP11.52□□□□□ -0.56
SCN10A-201ENST00000449082 FERP16591 822 aa11.52□□□□□ -0.56
SCN10A-201ENST00000449082 SMC5Q8IY18 1101 aa11.52□□□□□ -0.56
SCN10A-201ENST00000449082 CCDC155Q8N6L0 562 aa11.52□□□□□ -0.56
SCN10A-201ENST00000449082 LGR6Q9HBX8 967 aa11.52□□□□□ -0.56
SCN10A-201ENST00000449082 KRT83P78385 493 aa11.52□□□□□ -0.57
SCN10A-201ENST00000449082 SV2BQ7L1I2 683 aa11.52□□□□□ -0.57
SCN10A-201ENST00000449082 SREK1Q8WXA9 508 aaKnown RBP11.52□□□□□ -0.57
SCN10A-201ENST00000449082 GRIPAP1Q4V328 841 aa11.52□□□□□ -0.57
SCN10A-201ENST00000449082 PSMD1Q99460 953 aa11.52□□□□□ -0.57
SCN10A-201ENST00000449082 B4E1Z4 1266 aa11.52□□□□□ -0.57
SCN10A-201ENST00000449082 DEXIO95424 95 aa11.52□□□□□ -0.57
SCN10A-201ENST00000449082 APBA3O96018 575 aa11.52□□□□□ -0.57
SCN10A-201ENST00000449082 DPH6Q7L8W6 267 aa11.52□□□□□ -0.57
SCN10A-201ENST00000449082 INTS4Q96HW7 963 aaKnown RBP11.52□□□□□ -0.57
SCN10A-201ENST00000449082 ERVV-2B6SEH9 535 aa11.52□□□□□ -0.57
SCN10A-201ENST00000449082 ZBTB7BO15156 539 aaPredicted RBP11.52□□□□□ -0.57
SCN10A-201ENST00000449082 LETM2Q2VYF4 491 aa11.52□□□□□ -0.57
SCN10A-201ENST00000449082 FMNL3Q8IVF7 1028 aa11.52□□□□□ -0.57
SCN10A-201ENST00000449082 DHX37Q8IY37 1157 aaKnown RBP11.52□□□□□ -0.57
SCN10A-201ENST00000449082 ERICH4A6NGS2 130 aa11.51□□□□□ -0.57
SCN10A-201ENST00000449082 BAG6P46379 1132 aa11.51□□□□□ -0.57
SCN10A-201ENST00000449082 PLCD1P51178 756 aa11.51□□□□□ -0.57
SCN10A-201ENST00000449082 TAF12Q16514 161 aa11.51□□□□□ -0.57
SCN10A-201ENST00000449082 DNAJC25Q9H1X3 360 aa11.51□□□□□ -0.57
SCN10A-201ENST00000449082 PPP1R2P41236 205 aa11.51□□□□□ -0.57
SCN10A-201ENST00000449082 DNAJC10Q8IXB1 793 aa11.51□□□□□ -0.57
SCN10A-201ENST00000449082 CHL1O00533 1208 aa11.51□□□□□ -0.57
SCN10A-201ENST00000449082 EEF2P13639 858 aaKnown RBP11.51□□□□□ -0.57
SCN10A-201ENST00000449082 CEP112Q8N8E3 955 aa11.51□□□□□ -0.57
SCN10A-201ENST00000449082 PPP1R14CQ8TAE6 165 aa11.51□□□□□ -0.57
SCN10A-201ENST00000449082 DBNDD2Q9BQY9 259 aa11.51□□□□□ -0.57
SCN10A-201ENST00000449082 IVNS1ABPQ9Y6Y0 642 aa11.51□□□□□ -0.57
SCN10A-201ENST00000449082 AOX1Q06278 1338 aa11.51□□□□□ -0.57
SCN10A-201ENST00000449082 DKC1O60832 514 aaKnown RBP eCLIP11.51□□□□□ -0.57
SCN10A-201ENST00000449082 HSF2BPO75031 334 aa11.51□□□□□ -0.57
SCN10A-201ENST00000449082 RPS6KB1P23443 525 aa11.51□□□□□ -0.57
SCN10A-201ENST00000449082 UBXN1Q04323 297 aa11.51□□□□□ -0.57
SCN10A-201ENST00000449082 ZNF594Q96JF6 807 aaPredicted RBP11.51□□□□□ -0.57
SCN10A-201ENST00000449082 STK24Q9Y6E0 443 aa11.51□□□□□ -0.57
SCN10A-201ENST00000449082 PTGS1P23219 599 aa11.5□□□□□ -0.57
SCN10A-201ENST00000449082 ARID5AQ03989 594 aa11.5□□□□□ -0.57
SCN10A-201ENST00000449082 NIM1KQ8IY84 436 aa11.5□□□□□ -0.57
SCN10A-201ENST00000449082 ZNF408Q9H9D4 720 aa11.5□□□□□ -0.57
SCN10A-201ENST00000449082 FRMD4BQ9Y2L6 1034 aa11.5□□□□□ -0.57
SCN10A-201ENST00000449082 NPC1L1Q9UHC9 1359 aa11.5□□□□□ -0.57
SCN10A-201ENST00000449082 ZNF174Q15697 407 aa11.5□□□□□ -0.57
SCN10A-201ENST00000449082 RILPL1Q5EBL4 403 aa11.5□□□□□ -0.57
SCN10A-201ENST00000449082 TBC1D22AQ8WUA7 517 aa11.5□□□□□ -0.57
SCN10A-201ENST00000449082 AATFQ9NY61 560 aaKnown RBP eCLIP11.5□□□□□ -0.57
SCN10A-201ENST00000449082 SKILP12757 684 aa11.5□□□□□ -0.57
SCN10A-201ENST00000449082 SYT1P21579 422 aa11.5□□□□□ -0.57
SCN10A-201ENST00000449082 CCT6AP40227 531 aaKnown RBP11.5□□□□□ -0.57
SCN10A-201ENST00000449082 SMTNP53814 917 aa11.5□□□□□ -0.57
SCN10A-201ENST00000449082 KIF5AQ12840 1032 aa11.5□□□□□ -0.57
SCN10A-201ENST00000449082 TTC16Q8NEE8 873 aa11.5□□□□□ -0.57
SCN10A-201ENST00000449082 CCDC42Q96M95 316 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms