RNA–Protein interactions for RNA: ENST00000448611.6

LMNA-208, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,943 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-208ENST00000448611 PNPLA7Q6ZV29 1317 aa20.96■□□□□ 0.95
LMNA-208ENST00000448611 APPP05067 770 aa20.95■□□□□ 0.94
LMNA-208ENST00000448611 ST5P78524 1137 aa20.95■□□□□ 0.94
LMNA-208ENST00000448611 KLHL40Q2TBA0 621 aa20.95■□□□□ 0.94
LMNA-208ENST00000448611 ANO8Q9HCE9 1232 aaPredicted RBP20.95■□□□□ 0.94
LMNA-208ENST00000448611 POLRMTO00411 1230 aaKnown RBP20.94■□□□□ 0.94
LMNA-208ENST00000448611 PFKFB2O60825 505 aa20.94■□□□□ 0.94
LMNA-208ENST00000448611 CHST3Q7LGC8 479 aa20.94■□□□□ 0.94
LMNA-208ENST00000448611 NCOA7Q8NI08 942 aa20.94■□□□□ 0.94
LMNA-208ENST00000448611 EPB41L4AQ9HCS5 686 aaPredicted RBP20.94■□□□□ 0.94
LMNA-208ENST00000448611 ABCF2Q9UG63 623 aa20.94■□□□□ 0.94
LMNA-208ENST00000448611 MTMR6Q9Y217 621 aa20.94■□□□□ 0.94
LMNA-208ENST00000448611 ZBTB22O15209 634 aa20.94■□□□□ 0.94
LMNA-208ENST00000448611 PRPF40AO75400 957 aaKnown RBP20.94■□□□□ 0.94
LMNA-208ENST00000448611 HIBADHP31937 336 aaKnown RBP20.94■□□□□ 0.94
LMNA-208ENST00000448611 APOBRQ0VD83 1088 aa20.94■□□□□ 0.94
LMNA-208ENST00000448611 SCRN1Q12765 414 aa20.94■□□□□ 0.94
LMNA-208ENST00000448611 LCORLQ8N3X6 602 aa20.94■□□□□ 0.94
LMNA-208ENST00000448611 WDR19Q8NEZ3 1342 aa20.93■□□□□ 0.94
LMNA-208ENST00000448611 F13A1P00488 732 aa20.93■□□□□ 0.94
LMNA-208ENST00000448611 PDIA4P13667 645 aaKnown RBP20.93■□□□□ 0.94
LMNA-208ENST00000448611 GNAT2P19087 354 aa20.93■□□□□ 0.94
LMNA-208ENST00000448611 EVCP57679 992 aa20.93■□□□□ 0.94
LMNA-208ENST00000448611 TBC1D10CQ8IV04 446 aa20.93■□□□□ 0.94
LMNA-208ENST00000448611 IFNL3Q8IZI9 196 aa20.93■□□□□ 0.94
LMNA-208ENST00000448611 STK32BQ9NY57 414 aa20.93■□□□□ 0.94
LMNA-208ENST00000448611 DDX49Q9Y6V7 483 aaKnown RBP20.93■□□□□ 0.94
LMNA-208ENST00000448611 GSG1L2A8MUP6 293 aa20.92■□□□□ 0.94
LMNA-208ENST00000448611 MCM5P33992 734 aa20.92■□□□□ 0.94
LMNA-208ENST00000448611 SLC15A2Q16348 729 aa20.92■□□□□ 0.94
LMNA-208ENST00000448611 ADGRA1Q86SQ6 560 aa20.92■□□□□ 0.94
LMNA-208ENST00000448611 SLC51AQ86UW1 340 aa20.92■□□□□ 0.94
LMNA-208ENST00000448611 RPGRQ92834 1020 aaKnown RBP20.92■□□□□ 0.94
LMNA-208ENST00000448611 RAI14Q9P0K7 980 aa20.92■□□□□ 0.94
LMNA-208ENST00000448611 CACNA1SQ13698 1873 aa20.92■□□□□ 0.94
LMNA-208ENST00000448611 PRC1O43663 620 aa20.92■□□□□ 0.94
LMNA-208ENST00000448611 CYP7A1P22680 504 aa20.92■□□□□ 0.94
LMNA-208ENST00000448611 ANTXR2P58335 489 aa20.92■□□□□ 0.94
LMNA-208ENST00000448611 LARP1BQ659C4 914 aaKnown RBP20.92■□□□□ 0.94
LMNA-208ENST00000448611 RALYLQ86SE5 291 aaKnown RBP20.92■□□□□ 0.94
LMNA-208ENST00000448611 TXNRD3Q86VQ6 643 aa20.92■□□□□ 0.94
LMNA-208ENST00000448611 ZNF274Q96GC6 653 aaPredicted RBP20.92■□□□□ 0.94
LMNA-208ENST00000448611 PRKAB2O43741 272 aa20.91■□□□□ 0.94
LMNA-208ENST00000448611 PDCP20941 246 aa20.91■□□□□ 0.94
LMNA-208ENST00000448611 MIGA1Q8NAN2 632 aa20.91■□□□□ 0.94
LMNA-208ENST00000448611 LLPHQ9BRT6 129 aaKnown RBP20.91■□□□□ 0.94
LMNA-208ENST00000448611 LEMD3Q9Y2U8 911 aa20.91■□□□□ 0.94
LMNA-208ENST00000448611 JAK2O60674 1132 aa20.9■□□□□ 0.94
LMNA-208ENST00000448611 NAPBQ9H115 298 aa20.9■□□□□ 0.94
LMNA-208ENST00000448611 ANKIB1Q9P2G1 1089 aa20.9■□□□□ 0.94
LMNA-208ENST00000448611 SLC4A4Q9Y6R1 1079 aa20.9■□□□□ 0.94
LMNA-208ENST00000448611 KLRG2A4D1S0 409 aaPredicted RBP20.9■□□□□ 0.94
LMNA-208ENST00000448611 PDIA3P30101 505 aaKnown RBP20.9■□□□□ 0.94
LMNA-208ENST00000448611 SMARCC2Q8TAQ2 1214 aa20.9■□□□□ 0.94
LMNA-208ENST00000448611 ZNF384Q8TF68 577 aa20.9■□□□□ 0.94
LMNA-208ENST00000448611 GPHNQ9NQX3 736 aaPredicted RBP20.9■□□□□ 0.94
LMNA-208ENST00000448611 XDHP47989 1333 aa20.89■□□□□ 0.94
LMNA-208ENST00000448611 HOXA10P31260 410 aaPredicted RBP20.89■□□□□ 0.93
LMNA-208ENST00000448611 COL23A1Q86Y22 540 aaPredicted RBP20.89■□□□□ 0.93
LMNA-208ENST00000448611 RBM17Q96I25 401 aaKnown RBP20.89■□□□□ 0.93
LMNA-208ENST00000448611 TIAM2Q8IVF5 1701 aa20.88■□□□□ 0.93
LMNA-208ENST00000448611 VPS37CA5D8V6 355 aaPredicted RBP20.88■□□□□ 0.93
LMNA-208ENST00000448611 TRDNQ13061 729 aa20.88■□□□□ 0.93
LMNA-208ENST00000448611 FOXD4L6Q3SYB3 417 aaPredicted RBP20.88■□□□□ 0.93
LMNA-208ENST00000448611 FOXD4L3Q6VB84 417 aaPredicted RBP20.88■□□□□ 0.93
LMNA-208ENST00000448611 RIOK1Q9BRS2 568 aaKnown RBP20.88■□□□□ 0.93
LMNA-208ENST00000448611 NACAP1Q9BZK3 213 aa20.88■□□□□ 0.93
LMNA-208ENST00000448611 ATP6V1DQ9Y5K8 247 aa20.88■□□□□ 0.93
LMNA-208ENST00000448611 MYH13Q9UKX3 1938 aa20.88■□□□□ 0.93
LMNA-208ENST00000448611 MAGEB6P1A0A0J9YX57 407 aa20.88■□□□□ 0.93
LMNA-208ENST00000448611 CTDNEP1O95476 244 aa20.88■□□□□ 0.93
LMNA-208ENST00000448611 C15orf52Q6ZUT6 534 aaKnown RBP20.88■□□□□ 0.93
LMNA-208ENST00000448611 NKX2-3Q8TAU0 364 aa20.88■□□□□ 0.93
LMNA-208ENST00000448611 GPT2Q8TD30 523 aa20.88■□□□□ 0.93
LMNA-208ENST00000448611 FSD2A1L4K1 749 aa20.87■□□□□ 0.93
LMNA-208ENST00000448611 NAA16Q6N069 864 aaPredicted RBP20.87■□□□□ 0.93
LMNA-208ENST00000448611 NLGN1Q8N2Q7 840 aa20.87■□□□□ 0.93
LMNA-208ENST00000448611 TMEM87AQ8NBN3 555 aa20.87■□□□□ 0.93
LMNA-208ENST00000448611 NSUN7Q8NE18 718 aaKnown RBP20.87■□□□□ 0.93
LMNA-208ENST00000448611 NSUN4Q96CB9 384 aaKnown RBP20.87■□□□□ 0.93
LMNA-208ENST00000448611 NEDD4P46934 1319 aa20.87■□□□□ 0.93
LMNA-208ENST00000448611 CYB5R4Q7L1T6 521 aa20.86■□□□□ 0.93
LMNA-208ENST00000448611 CDC37L1Q7L3B6 337 aa20.86■□□□□ 0.93
LMNA-208ENST00000448611 FLAD1Q8NFF5 587 aa20.86■□□□□ 0.93
LMNA-208ENST00000448611 BRPF3Q9ULD4 1205 aa20.86■□□□□ 0.93
LMNA-208ENST00000448611 CCT2P78371 535 aaKnown RBP20.86■□□□□ 0.93
LMNA-208ENST00000448611 GPSM2P81274 684 aa20.86■□□□□ 0.93
LMNA-208ENST00000448611 CRAMP1Q96RY5 1269 aa20.86■□□□□ 0.93
LMNA-208ENST00000448611 TACC3Q9Y6A5 838 aa20.86■□□□□ 0.93
LMNA-208ENST00000448611 SALL1Q9NSC2 1324 aa20.85■□□□□ 0.93
LMNA-208ENST00000448611 BBOX1O75936 387 aa20.85■□□□□ 0.93
LMNA-208ENST00000448611 TDO2P48775 406 aa20.85■□□□□ 0.93
LMNA-208ENST00000448611 MECOMQ03112 1051 aa20.85■□□□□ 0.93
LMNA-208ENST00000448611 CTDSPL2Q05D32 466 aa20.85■□□□□ 0.93
LMNA-208ENST00000448611 CHAF1AQ13111 956 aaPredicted RBP20.85■□□□□ 0.93
LMNA-208ENST00000448611 NCOA5Q9HCD5 579 aaKnown RBP20.85■□□□□ 0.93
LMNA-208ENST00000448611 CNPY2Q9Y2B0 182 aa20.85■□□□□ 0.93
LMNA-208ENST00000448611 NRXN2Q9P2S2 1712 aa20.85■□□□□ 0.93
LMNA-208ENST00000448611 B4E1Z4 1266 aa20.84■□□□□ 0.93
LMNA-208ENST00000448611 AKNAD1Q5T1N1 836 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms