RNA–Protein interactions for RNA: ENST00000448416.6

SYNPO2-204, Transcript of synaptopodin 2, humanhuman

TSL 2 BASIC

Gene SYNPO2, Length 4,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-204ENST00000448416 XRN1Q8IZH2 1706 aaKnown RBP10.77□□□□□ -0.69
SYNPO2-204ENST00000448416 PFKFB2O60825 505 aa10.77□□□□□ -0.69
SYNPO2-204ENST00000448416 IGSF22Q8N9C0 903 aa10.77□□□□□ -0.69
SYNPO2-204ENST00000448416 BOLA2Q9H3K6 86 aa10.77□□□□□ -0.69
SYNPO2-204ENST00000448416 NEDD4P46934 1319 aa10.77□□□□□ -0.69
SYNPO2-204ENST00000448416 POGZQ7Z3K3 1410 aa10.77□□□□□ -0.69
SYNPO2-204ENST00000448416 H0YHG0 523 aa10.77□□□□□ -0.69
SYNPO2-204ENST00000448416 SPTLC2O15270 562 aa10.77□□□□□ -0.69
SYNPO2-204ENST00000448416 TUBB2AQ13885 445 aa10.77□□□□□ -0.69
SYNPO2-204ENST00000448416 ILDR1Q86SU0 546 aaPredicted RBP10.77□□□□□ -0.69
SYNPO2-204ENST00000448416 TUBB2BQ9BVA1 445 aa10.77□□□□□ -0.69
SYNPO2-204ENST00000448416 CLIC4Q9Y696 253 aa10.77□□□□□ -0.69
SYNPO2-204ENST00000448416 CTAGE9A4FU28 777 aa10.76□□□□□ -0.69
SYNPO2-204ENST00000448416 SYF2O95926 243 aaKnown RBP10.76□□□□□ -0.69
SYNPO2-204ENST00000448416 TRDNQ13061 729 aa10.76□□□□□ -0.69
SYNPO2-204ENST00000448416 MTF1Q14872 753 aa10.76□□□□□ -0.69
SYNPO2-204ENST00000448416 WAPLQ7Z5K2 1190 aa10.76□□□□□ -0.69
SYNPO2-204ENST00000448416 POLR3DP05423 398 aaPredicted RBP10.76□□□□□ -0.69
SYNPO2-204ENST00000448416 TBX2Q13207 712 aaPredicted RBP10.76□□□□□ -0.69
SYNPO2-204ENST00000448416 SPECC1LQ69YQ0 1117 aa10.76□□□□□ -0.69
SYNPO2-204ENST00000448416 CCDC8Q9H0W5 538 aaPredicted RBP10.76□□□□□ -0.69
SYNPO2-204ENST00000448416 SNRKQ9NRH2 765 aa10.76□□□□□ -0.69
SYNPO2-204ENST00000448416 PA2G4Q9UQ80 394 aaKnown RBP10.76□□□□□ -0.69
SYNPO2-204ENST00000448416 CCDC189A1A4V9 331 aa10.76□□□□□ -0.69
SYNPO2-204ENST00000448416 TAF5LO75529 589 aa10.76□□□□□ -0.69
SYNPO2-204ENST00000448416 CTDNEP1O95476 244 aa10.76□□□□□ -0.69
SYNPO2-204ENST00000448416 PPP2R5AQ15172 486 aa10.76□□□□□ -0.69
SYNPO2-204ENST00000448416 LRCH2Q5VUJ6 765 aa10.76□□□□□ -0.69
SYNPO2-204ENST00000448416 GNL3LQ9NVN8 582 aaKnown RBP10.76□□□□□ -0.69
SYNPO2-204ENST00000448416 MYH15Q9Y2K3 1946 aa10.76□□□□□ -0.69
SYNPO2-204ENST00000448416 SHTN1A0MZ66 631 aa10.75□□□□□ -0.69
SYNPO2-204ENST00000448416 PRPF6O94906 941 aaKnown RBP10.75□□□□□ -0.69
SYNPO2-204ENST00000448416 PFKFB1P16118 471 aa10.75□□□□□ -0.69
SYNPO2-204ENST00000448416 RDXP35241 583 aaKnown RBP10.75□□□□□ -0.69
SYNPO2-204ENST00000448416 PIP4K2BP78356 416 aa10.75□□□□□ -0.69
SYNPO2-204ENST00000448416 TAF7Q15545 349 aaPredicted RBP10.75□□□□□ -0.69
SYNPO2-204ENST00000448416 RABEP2Q9H5N1 569 aa10.75□□□□□ -0.69
SYNPO2-204ENST00000448416 VIPAS39Q9H9C1 493 aa10.75□□□□□ -0.69
SYNPO2-204ENST00000448416 INTS13Q9NVM9 706 aa10.75□□□□□ -0.69
SYNPO2-204ENST00000448416 CAPN7Q9Y6W3 813 aa10.75□□□□□ -0.69
SYNPO2-204ENST00000448416 ALDH1L1O75891 902 aa10.75□□□□□ -0.69
SYNPO2-204ENST00000448416 TFRCP02786 760 aaKnown RBP10.75□□□□□ -0.69
SYNPO2-204ENST00000448416 SCP2P22307 547 aa10.75□□□□□ -0.69
SYNPO2-204ENST00000448416 HSP90AB2PQ58FF8 381 aa10.75□□□□□ -0.69
SYNPO2-204ENST00000448416 HDGFL1Q5TGJ6 251 aa10.75□□□□□ -0.69
SYNPO2-204ENST00000448416 BCAS4Q8TDM0 211 aa10.75□□□□□ -0.69
SYNPO2-204ENST00000448416 RIN2Q8WYP3 895 aaPredicted RBP10.75□□□□□ -0.69
SYNPO2-204ENST00000448416 CABS1Q96KC9 395 aa10.75□□□□□ -0.69
SYNPO2-204ENST00000448416 NCOA5Q9HCD5 579 aaKnown RBP10.75□□□□□ -0.69
SYNPO2-204ENST00000448416 ARAP3Q8WWN8 1544 aa10.75□□□□□ -0.69
SYNPO2-204ENST00000448416 MYO1BO43795 1136 aa10.75□□□□□ -0.69
SYNPO2-204ENST00000448416 AARSP49588 968 aaKnown RBP eCLIP10.75□□□□□ -0.69
SYNPO2-204ENST00000448416 AKAP17AQ02040 695 aaKnown RBP10.75□□□□□ -0.69
SYNPO2-204ENST00000448416 FAM76AQ8TAV0 307 aa10.75□□□□□ -0.69
SYNPO2-204ENST00000448416 CDHR2Q9BYE9 1310 aa10.75□□□□□ -0.69
SYNPO2-204ENST00000448416 SOWAHDA6NJG2 315 aa10.75□□□□□ -0.69
SYNPO2-204ENST00000448416 SYNE3Q6ZMZ3 975 aa10.75□□□□□ -0.69
SYNPO2-204ENST00000448416 PXDNLA1KZ92 1463 aa10.75□□□□□ -0.69
SYNPO2-204ENST00000448416 MED23Q9ULK4 1368 aa10.74□□□□□ -0.69
SYNPO2-204ENST00000448416 YEATS4O95619 227 aa10.74□□□□□ -0.69
SYNPO2-204ENST00000448416 IRAK1P51617 712 aa10.74□□□□□ -0.69
SYNPO2-204ENST00000448416 CEP120Q8N960 986 aa10.74□□□□□ -0.69
SYNPO2-204ENST00000448416 KAT14Q9H8E8 782 aa10.74□□□□□ -0.69
SYNPO2-204ENST00000448416 SYKP43405 635 aa10.74□□□□□ -0.69
SYNPO2-204ENST00000448416 MAP9Q49MG5 647 aa10.74□□□□□ -0.69
SYNPO2-204ENST00000448416 SLC35F6Q8N357 371 aa10.74□□□□□ -0.69
SYNPO2-204ENST00000448416 NOA1Q8NC60 698 aaKnown RBP10.74□□□□□ -0.69
SYNPO2-204ENST00000448416 CCDC148Q8NFR7 591 aa10.74□□□□□ -0.69
SYNPO2-204ENST00000448416 TACO1Q9BSH4 297 aaKnown RBP10.74□□□□□ -0.69
SYNPO2-204ENST00000448416 STIM1Q13586 685 aa10.74□□□□□ -0.69
SYNPO2-204ENST00000448416 NEDD9Q14511 834 aa10.74□□□□□ -0.69
SYNPO2-204ENST00000448416 WHAMMP3Q1A5X7 153 aa10.74□□□□□ -0.69
SYNPO2-204ENST00000448416 CPLX2Q6PUV4 134 aaKnown RBP10.74□□□□□ -0.69
SYNPO2-204ENST00000448416 EGFL6Q8IUX8 553 aa10.74□□□□□ -0.69
SYNPO2-204ENST00000448416 CRACR2AQ9BSW2 395 aa10.74□□□□□ -0.69
SYNPO2-204ENST00000448416 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.74□□□□□ -0.69
SYNPO2-204ENST00000448416 TUBE1Q9UJT0 475 aa10.74□□□□□ -0.69
SYNPO2-204ENST00000448416 ADGRG1Q9Y653 693 aa10.74□□□□□ -0.69
SYNPO2-204ENST00000448416 CMA1P23946 247 aa10.73□□□□□ -0.69
SYNPO2-204ENST00000448416 USPL1Q5W0Q7 1092 aa10.73□□□□□ -0.69
SYNPO2-204ENST00000448416 OTUD7BQ6GQQ9 843 aa10.73□□□□□ -0.69
SYNPO2-204ENST00000448416 STAG1Q8WVM7 1258 aa10.73□□□□□ -0.69
SYNPO2-204ENST00000448416 C19orf44Q9H6X5 657 aa10.73□□□□□ -0.69
SYNPO2-204ENST00000448416 HPCAL4Q9UM19 191 aa10.73□□□□□ -0.69
SYNPO2-204ENST00000448416 A0A0U1RQJ8 604 aa10.73□□□□□ -0.69
SYNPO2-204ENST00000448416 PNOCQ13519 176 aa10.73□□□□□ -0.69
SYNPO2-204ENST00000448416 WDR93Q6P2C0 686 aa10.73□□□□□ -0.69
SYNPO2-204ENST00000448416 PRPF38AQ8NAV1 312 aaKnown RBP10.73□□□□□ -0.69
SYNPO2-204ENST00000448416 ATRIPQ8WXE1 791 aa10.73□□□□□ -0.69
SYNPO2-204ENST00000448416 A1CFQ9NQ94 594 aaKnown RBP10.73□□□□□ -0.69
SYNPO2-204ENST00000448416 POLR3EQ9NVU0 708 aa10.73□□□□□ -0.69
SYNPO2-204ENST00000448416 PPP1R12AO14974 1030 aaPredicted RBP10.73□□□□□ -0.69
SYNPO2-204ENST00000448416 SHOX2O60902 331 aaPredicted RBP10.73□□□□□ -0.69
SYNPO2-204ENST00000448416 CYP21A2P08686 494 aa10.73□□□□□ -0.69
SYNPO2-204ENST00000448416 EIF2S2P20042 333 aaKnown RBP10.73□□□□□ -0.69
SYNPO2-204ENST00000448416 ELF1P32519 619 aa10.73□□□□□ -0.69
SYNPO2-204ENST00000448416 ARHGEF25Q86VW2 580 aa10.73□□□□□ -0.69
SYNPO2-204ENST00000448416 EAF2Q96CJ1 260 aaPredicted RBP10.73□□□□□ -0.69
SYNPO2-204ENST00000448416 NAPGQ99747 312 aaPredicted RBP10.73□□□□□ -0.69
SYNPO2-204ENST00000448416 U3KPZ7 1027 aaPredicted RBP10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms