RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 BACH1O14867 736 aa9.67□□□□□ -0.86
PTPN3-204ENST00000446349 SKIDA1Q1XH10 827 aa9.67□□□□□ -0.86
PTPN3-204ENST00000446349 IWS1Q96ST2 819 aa9.67□□□□□ -0.86
PTPN3-204ENST00000446349 UGGT1Q9NYU2 1555 aa9.67□□□□□ -0.86
PTPN3-204ENST00000446349 SLU7O95391 586 aaKnown RBP9.67□□□□□ -0.86
PTPN3-204ENST00000446349 FERMT3Q86UX7 667 aa9.67□□□□□ -0.86
PTPN3-204ENST00000446349 CCDC77Q9BR77 488 aa9.67□□□□□ -0.86
PTPN3-204ENST00000446349 SHTN1A0MZ66 631 aa9.67□□□□□ -0.86
PTPN3-204ENST00000446349 FAM83GA6ND36 823 aa9.67□□□□□ -0.86
PTPN3-204ENST00000446349 ZBTB24O43167 697 aaPredicted RBP9.67□□□□□ -0.86
PTPN3-204ENST00000446349 CC2D2BQ6DHV5 1058 aa9.67□□□□□ -0.86
PTPN3-204ENST00000446349 TMED8Q6PL24 325 aaPredicted RBP9.67□□□□□ -0.86
PTPN3-204ENST00000446349 ZSCAN22P10073 491 aaPredicted RBP9.67□□□□□ -0.86
PTPN3-204ENST00000446349 KRT83P78385 493 aa9.67□□□□□ -0.86
PTPN3-204ENST00000446349 MPNDQ8N594 471 aa9.67□□□□□ -0.86
PTPN3-204ENST00000446349 CCDC155Q8N6L0 562 aa9.67□□□□□ -0.86
PTPN3-204ENST00000446349 CHURC1Q8WUH1 139 aa9.67□□□□□ -0.86
PTPN3-204ENST00000446349 CLASP1Q7Z460 1538 aa9.67□□□□□ -0.86
PTPN3-204ENST00000446349 TARBP1Q13395 1621 aaKnown RBP9.67□□□□□ -0.86
PTPN3-204ENST00000446349 TMCO5BA8MYB1 307 aa9.66□□□□□ -0.86
PTPN3-204ENST00000446349 NOP56O00567 594 aaKnown RBP9.66□□□□□ -0.86
PTPN3-204ENST00000446349 CLUL1Q15846 466 aa9.66□□□□□ -0.86
PTPN3-204ENST00000446349 CSRNP2Q9H175 543 aa9.66□□□□□ -0.86
PTPN3-204ENST00000446349 PREX2Q70Z35 1606 aa9.66□□□□□ -0.86
PTPN3-204ENST00000446349 N4BP3O15049 544 aa9.66□□□□□ -0.86
PTPN3-204ENST00000446349 DLGAP5Q15398 846 aa9.66□□□□□ -0.86
PTPN3-204ENST00000446349 IQUBQ8NA54 791 aa9.66□□□□□ -0.86
PTPN3-204ENST00000446349 GUCY1B3Q02153 619 aa9.66□□□□□ -0.86
PTPN3-204ENST00000446349 MRPS27Q92552 414 aaKnown RBP9.66□□□□□ -0.86
PTPN3-204ENST00000446349 APPBP2Q92624 585 aa9.66□□□□□ -0.86
PTPN3-204ENST00000446349 TUBBP07437 444 aa9.66□□□□□ -0.86
PTPN3-204ENST00000446349 DCTPP1Q9H773 170 aa9.66□□□□□ -0.86
PTPN3-204ENST00000446349 NPHP4O75161 1426 aaPredicted RBP9.66□□□□□ -0.86
PTPN3-204ENST00000446349 FAM177A1Q8N128 213 aaPredicted RBP9.66□□□□□ -0.86
PTPN3-204ENST00000446349 CABLES1Q8TDN4 633 aa9.66□□□□□ -0.86
PTPN3-204ENST00000446349 SDSP20132 328 aa9.66□□□□□ -0.86
PTPN3-204ENST00000446349 WDR44Q5JSH3 913 aa9.66□□□□□ -0.86
PTPN3-204ENST00000446349 INTS4Q96HW7 963 aaKnown RBP9.66□□□□□ -0.86
PTPN3-204ENST00000446349 H0YCG3 227 aa9.66□□□□□ -0.86
PTPN3-204ENST00000446349 ITGA6P23229 1130 aa9.66□□□□□ -0.86
PTPN3-204ENST00000446349 ABCD1P33897 745 aa9.66□□□□□ -0.86
PTPN3-204ENST00000446349 ASIC1P78348 528 aa9.66□□□□□ -0.86
PTPN3-204ENST00000446349 MEIS3Q99687 375 aa9.66□□□□□ -0.86
PTPN3-204ENST00000446349 TSGA10Q9BZW7 698 aa9.66□□□□□ -0.86
PTPN3-204ENST00000446349 HMGB1P1B2RPK0 211 aaPredicted RBP9.65□□□□□ -0.86
PTPN3-204ENST00000446349 ATP2A2P16615 1042 aaKnown RBP9.65□□□□□ -0.86
PTPN3-204ENST00000446349 MLH3Q9UHC1 1453 aa9.65□□□□□ -0.86
PTPN3-204ENST00000446349 DEXIO95424 95 aa9.65□□□□□ -0.86
PTPN3-204ENST00000446349 ARID4AP29374 1257 aaPredicted RBP9.65□□□□□ -0.86
PTPN3-204ENST00000446349 IRX3P78415 501 aaPredicted RBP9.65□□□□□ -0.86
PTPN3-204ENST00000446349 MRPS9P82933 396 aaKnown RBP9.65□□□□□ -0.86
PTPN3-204ENST00000446349 NOX5Q96PH1 765 aa9.65□□□□□ -0.86
PTPN3-204ENST00000446349 KIAA0232Q92628 1395 aa9.65□□□□□ -0.86
PTPN3-204ENST00000446349 MACROD2A1Z1Q3 448 aa9.65□□□□□ -0.86
PTPN3-204ENST00000446349 STRN3Q13033 797 aa9.65□□□□□ -0.86
PTPN3-204ENST00000446349 RILPL1Q5EBL4 403 aa9.65□□□□□ -0.86
PTPN3-204ENST00000446349 BRF1Q92994 677 aa9.65□□□□□ -0.86
PTPN3-204ENST00000446349 TEKT1Q969V4 418 aa9.65□□□□□ -0.86
PTPN3-204ENST00000446349 ZCCHC11Q5TAX3 1644 aaKnown RBP9.65□□□□□ -0.86
PTPN3-204ENST00000446349 AKR1B10O60218 316 aa9.65□□□□□ -0.86
PTPN3-204ENST00000446349 STX10O60499 249 aa9.65□□□□□ -0.86
PTPN3-204ENST00000446349 ATP7BP35670 1465 aa9.65□□□□□ -0.86
PTPN3-204ENST00000446349 IQCDQ96DY2 449 aa9.65□□□□□ -0.86
PTPN3-204ENST00000446349 AZI2Q9H6S1 392 aa9.65□□□□□ -0.86
PTPN3-204ENST00000446349 RIMBP2O15034 1052 aa9.65□□□□□ -0.87
PTPN3-204ENST00000446349 NR1I2O75469 434 aa9.65□□□□□ -0.87
PTPN3-204ENST00000446349 YWHAEP62258 255 aaKnown RBP9.65□□□□□ -0.87
PTPN3-204ENST00000446349 FAM98CQ17RN3 349 aaKnown RBP9.65□□□□□ -0.87
PTPN3-204ENST00000446349 GNPTABQ3T906 1256 aa9.65□□□□□ -0.87
PTPN3-204ENST00000446349 Q6ZUG5 572 aa9.65□□□□□ -0.87
PTPN3-204ENST00000446349 CDC37L1Q7L3B6 337 aa9.65□□□□□ -0.87
PTPN3-204ENST00000446349 CCDC144CPQ8IYA2 1237 aa9.65□□□□□ -0.87
PTPN3-204ENST00000446349 SBNO2Q9Y2G9 1366 aa9.65□□□□□ -0.87
PTPN3-204ENST00000446349 EPB41P11171 864 aaKnown RBP9.64□□□□□ -0.87
PTPN3-204ENST00000446349 ARPP21Q9UBL0 812 aaPredicted RBP9.64□□□□□ -0.87
PTPN3-204ENST00000446349 ANKARQ7Z5J8 1434 aa9.64□□□□□ -0.87
PTPN3-204ENST00000446349 SYCE3A1L190 88 aa9.64□□□□□ -0.87
PTPN3-204ENST00000446349 RXRBP28702 533 aa9.64□□□□□ -0.87
PTPN3-204ENST00000446349 SPECC1LQ69YQ0 1117 aa9.64□□□□□ -0.87
PTPN3-204ENST00000446349 ATP10DQ9P241 1426 aa9.64□□□□□ -0.87
PTPN3-204ENST00000446349 SEMA3EO15041 775 aa9.64□□□□□ -0.87
PTPN3-204ENST00000446349 P4HA1P13674 534 aa9.64□□□□□ -0.87
PTPN3-204ENST00000446349 FNBP1Q96RU3 617 aa9.64□□□□□ -0.87
PTPN3-204ENST00000446349 SPECC1Q5M775 1068 aa9.64□□□□□ -0.87
PTPN3-204ENST00000446349 CNNM4Q6P4Q7 775 aa9.64□□□□□ -0.87
PTPN3-204ENST00000446349 SV2BQ7L1I2 683 aa9.64□□□□□ -0.87
PTPN3-204ENST00000446349 EXOC8Q8IYI6 725 aa9.64□□□□□ -0.87
PTPN3-204ENST00000446349 NAP1L3Q99457 506 aaPredicted RBP9.64□□□□□ -0.87
PTPN3-204ENST00000446349 CALUO43852 315 aaPredicted RBP9.64□□□□□ -0.87
PTPN3-204ENST00000446349 ZNF165P49910 485 aa9.64□□□□□ -0.87
PTPN3-204ENST00000446349 GPR162Q16538 588 aa9.64□□□□□ -0.87
PTPN3-204ENST00000446349 CAMK4Q16566 473 aa9.64□□□□□ -0.87
PTPN3-204ENST00000446349 NLRX1Q86UT6 975 aa9.64□□□□□ -0.87
PTPN3-204ENST00000446349 CCDC102AQ96A19 550 aa9.64□□□□□ -0.87
PTPN3-204ENST00000446349 BICC1Q9H694 974 aaKnown RBP9.64□□□□□ -0.87
PTPN3-204ENST00000446349 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.64□□□□□ -0.87
PTPN3-204ENST00000446349 GRM1Q13255 1194 aa9.64□□□□□ -0.87
PTPN3-204ENST00000446349 OTUD6AQ7L8S5 288 aa9.64□□□□□ -0.87
PTPN3-204ENST00000446349 VAMP4O75379 141 aa9.64□□□□□ -0.87
PTPN3-204ENST00000446349 C6orf163Q5TEZ5 329 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms