RNA–Protein interactions for RNA: ENST00000444609.1

HDAC8-215, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 607 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-215ENST00000444609 EIF2S2P20042 333 aaKnown RBP13.45□□□□□ -0.26
HDAC8-215ENST00000444609 IRF5Q13568 498 aa13.45□□□□□ -0.26
HDAC8-215ENST00000444609 RTL5Q5HYW3 569 aaPredicted RBP13.45□□□□□ -0.26
HDAC8-215ENST00000444609 ASB2Q96Q27 587 aa13.45□□□□□ -0.26
HDAC8-215ENST00000444609 UHRF1Q96T88 793 aaPredicted RBP13.45□□□□□ -0.26
HDAC8-215ENST00000444609 ISCA1Q9BUE6 129 aa13.45□□□□□ -0.26
HDAC8-215ENST00000444609 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.45□□□□□ -0.26
HDAC8-215ENST00000444609 AOX1Q06278 1338 aa13.44□□□□□ -0.26
HDAC8-215ENST00000444609 PDHXO00330 501 aa13.44□□□□□ -0.26
HDAC8-215ENST00000444609 GTF2IP78347 998 aa13.44□□□□□ -0.26
HDAC8-215ENST00000444609 CFAP100Q494V2 611 aa13.44□□□□□ -0.26
HDAC8-215ENST00000444609 ANKRD23Q86SG2 305 aa13.44□□□□□ -0.26
HDAC8-215ENST00000444609 ERO1BQ86YB8 467 aa13.44□□□□□ -0.26
HDAC8-215ENST00000444609 TEPSINQ96N21 525 aa13.44□□□□□ -0.26
HDAC8-215ENST00000444609 BCRP11274 1271 aa13.43□□□□□ -0.26
HDAC8-215ENST00000444609 TXNRD3Q86VQ6 643 aa13.43□□□□□ -0.26
HDAC8-215ENST00000444609 CDAN1Q8IWY9 1227 aa13.43□□□□□ -0.26
HDAC8-215ENST00000444609 LRFN3Q9BTN0 628 aa13.43□□□□□ -0.26
HDAC8-215ENST00000444609 PFASO15067 1338 aa13.42□□□□□ -0.26
HDAC8-215ENST00000444609 CACNA1AO00555 2505 aa13.42□□□□□ -0.26
HDAC8-215ENST00000444609 PPIL2Q13356 520 aa13.42□□□□□ -0.26
HDAC8-215ENST00000444609 ANKRD18AQ8IVF6 992 aa13.42□□□□□ -0.26
HDAC8-215ENST00000444609 CERS5Q8N5B7 392 aa13.42□□□□□ -0.26
HDAC8-215ENST00000444609 LBHD1Q9BQE6 289 aaPredicted RBP13.42□□□□□ -0.26
HDAC8-215ENST00000444609 SNCAIPQ9Y6H5 919 aa13.42□□□□□ -0.26
HDAC8-215ENST00000444609 ATP5J2-PTCD1G3V325 749 aa13.41□□□□□ -0.26
HDAC8-215ENST00000444609 SMAD3P84022 425 aaKnown RBP13.41□□□□□ -0.26
HDAC8-215ENST00000444609 CCDC152Q4G0S7 254 aa13.41□□□□□ -0.26
HDAC8-215ENST00000444609 P2RX7Q99572 595 aaKnown RBP13.41□□□□□ -0.26
HDAC8-215ENST00000444609 OGDHLQ9ULD0 1010 aa13.41□□□□□ -0.26
HDAC8-215ENST00000444609 CCT4P50991 539 aaKnown RBP13.4□□□□□ -0.26
HDAC8-215ENST00000444609 TNFAIP1Q13829 316 aa13.4□□□□□ -0.26
HDAC8-215ENST00000444609 MINPP1Q9UNW1 487 aa13.4□□□□□ -0.26
HDAC8-215ENST00000444609 COL6A1P12109 1028 aa13.39□□□□□ -0.27
HDAC8-215ENST00000444609 TRIM28Q13263 835 aaKnown RBP13.39□□□□□ -0.27
HDAC8-215ENST00000444609 SHHQ15465 462 aa13.39□□□□□ -0.27
HDAC8-215ENST00000444609 PLBD2Q8NHP8 589 aa13.39□□□□□ -0.27
HDAC8-215ENST00000444609 OTOFQ9HC10 1997 aa13.39□□□□□ -0.27
HDAC8-215ENST00000444609 F8W031 263 aaPredicted RBP13.38□□□□□ -0.27
HDAC8-215ENST00000444609 TNPO2O14787 897 aaKnown RBP13.38□□□□□ -0.27
HDAC8-215ENST00000444609 HSP90B1P14625 803 aaKnown RBP13.38□□□□□ -0.27
HDAC8-215ENST00000444609 MRPS5P82675 430 aaKnown RBP13.38□□□□□ -0.27
HDAC8-215ENST00000444609 MOGSQ13724 837 aa13.38□□□□□ -0.27
HDAC8-215ENST00000444609 LRRC26Q2I0M4 334 aa13.38□□□□□ -0.27
HDAC8-215ENST00000444609 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.38□□□□□ -0.27
HDAC8-215ENST00000444609 ZKSCAN4Q969J2 545 aaPredicted RBP13.38□□□□□ -0.27
HDAC8-215ENST00000444609 CCDC85AQ96PX6 553 aaPredicted RBP13.38□□□□□ -0.27
HDAC8-215ENST00000444609 HMX1Q9NP08 348 aaPredicted RBP13.38□□□□□ -0.27
HDAC8-215ENST00000444609 ZNF70Q9UC06 446 aaPredicted RBP13.38□□□□□ -0.27
HDAC8-215ENST00000444609 BDP1A6H8Y1 2624 aa13.38□□□□□ -0.27
HDAC8-215ENST00000444609 CYP2C8P10632 490 aa13.37□□□□□ -0.27
HDAC8-215ENST00000444609 PPATQ06203 517 aa13.37□□□□□ -0.27
HDAC8-215ENST00000444609 SPDYE2Q495Y8 402 aa13.37□□□□□ -0.27
HDAC8-215ENST00000444609 CC2D1BQ5T0F9 858 aaKnown RBP13.37□□□□□ -0.27
HDAC8-215ENST00000444609 ZBTB38Q8NAP3 1195 aaPredicted RBP13.37□□□□□ -0.27
HDAC8-215ENST00000444609 PARK7Q99497 189 aaKnown RBP13.37□□□□□ -0.27
HDAC8-215ENST00000444609 TMEM39BQ9GZU3 492 aa13.37□□□□□ -0.27
HDAC8-215ENST00000444609 BSDC1Q9NW68 430 aaPredicted RBP13.37□□□□□ -0.27
HDAC8-215ENST00000444609 THEGQ9P2T0 379 aa13.37□□□□□ -0.27
HDAC8-215ENST00000444609 TAOK2Q9UL54 1235 aa13.37□□□□□ -0.27
HDAC8-215ENST00000444609 LEMD3Q9Y2U8 911 aa13.37□□□□□ -0.27
HDAC8-215ENST00000444609 KLRK1P26718 216 aa13.36□□□□□ -0.27
HDAC8-215ENST00000444609 MRE11P49959 708 aa13.36□□□□□ -0.27
HDAC8-215ENST00000444609 RBM5P52756 815 aaKnown RBP eCLIP13.36□□□□□ -0.27
HDAC8-215ENST00000444609 GRIN2CQ14957 1233 aa13.36□□□□□ -0.27
HDAC8-215ENST00000444609 WRNIP1Q96S55 665 aa13.36□□□□□ -0.27
HDAC8-215ENST00000444609 NCOR1O75376 2440 aa13.35□□□□□ -0.27
HDAC8-215ENST00000444609 PDE8AO60658 829 aa13.35□□□□□ -0.27
HDAC8-215ENST00000444609 U2AF1L5P0DN76 240 aaPredicted RBP13.35□□□□□ -0.27
HDAC8-215ENST00000444609 EIF4G2P78344 907 aaKnown RBP eCLIP13.35□□□□□ -0.27
HDAC8-215ENST00000444609 U2AF1Q01081 240 aaKnown RBP eCLIP13.35□□□□□ -0.27
HDAC8-215ENST00000444609 C9orf50Q5SZB4 431 aa13.35□□□□□ -0.27
HDAC8-215ENST00000444609 EPHX3Q9H6B9 360 aa13.35□□□□□ -0.27
HDAC8-215ENST00000444609 CD209Q9NNX6 404 aa13.35□□□□□ -0.27
HDAC8-215ENST00000444609 KCNH4Q9UQ05 1017 aa13.35□□□□□ -0.27
HDAC8-215ENST00000444609 HMGCRP04035 888 aa13.34□□□□□ -0.27
HDAC8-215ENST00000444609 FKBP1AP62942 108 aaKnown RBP13.34□□□□□ -0.27
HDAC8-215ENST00000444609 TMEM31Q5JXX7 168 aa13.34□□□□□ -0.27
HDAC8-215ENST00000444609 GPAT2Q6NUI2 795 aa13.34□□□□□ -0.27
HDAC8-215ENST00000444609 IL27Q8NEV9 243 aa13.34□□□□□ -0.27
HDAC8-215ENST00000444609 NECAB3Q96P71 396 aaPredicted RBP13.34□□□□□ -0.27
HDAC8-215ENST00000444609 CDC5LQ99459 802 aaKnown RBP13.34□□□□□ -0.27
HDAC8-215ENST00000444609 TDRD3Q9H7E2 651 aaKnown RBP13.34□□□□□ -0.27
HDAC8-215ENST00000444609 NUDCQ9Y266 331 aa13.34□□□□□ -0.27
HDAC8-215ENST00000444609 TCP10L2B9ZVM9 353 aa13.33□□□□□ -0.28
HDAC8-215ENST00000444609 PER1O15534 1290 aaPredicted RBP13.33□□□□□ -0.28
HDAC8-215ENST00000444609 TNNI2P48788 182 aa13.33□□□□□ -0.28
HDAC8-215ENST00000444609 TRIM32Q13049 653 aa13.33□□□□□ -0.28
HDAC8-215ENST00000444609 PPM1EQ8WY54 764 aa13.33□□□□□ -0.28
HDAC8-215ENST00000444609 COA7Q96BR5 231 aa13.33□□□□□ -0.28
HDAC8-215ENST00000444609 MUC6Q6W4X9 2439 aa13.32□□□□□ -0.28
HDAC8-215ENST00000444609 TSPYL4Q9UJ04 414 aa13.32□□□□□ -0.28
HDAC8-215ENST00000444609 DDX60LQ5H9U9 1706 aaKnown RBP13.32□□□□□ -0.28
HDAC8-215ENST00000444609 AKNAD1Q5T1N1 836 aa13.31□□□□□ -0.28
HDAC8-215ENST00000444609 PCCAP05165 728 aaPredicted RBP13.3□□□□□ -0.28
HDAC8-215ENST00000444609 BMP1P13497 986 aa13.3□□□□□ -0.28
HDAC8-215ENST00000444609 PDE3AQ14432 1141 aa13.3□□□□□ -0.28
HDAC8-215ENST00000444609 POTEEQ6S8J3 1075 aa13.3□□□□□ -0.28
HDAC8-215ENST00000444609 CFAP53Q96M91 514 aa13.3□□□□□ -0.28
HDAC8-215ENST00000444609 PRKAG2Q9UGJ0 569 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms