RNA–Protein interactions for RNA: ENST00000444272.1

SYNCRIP-203, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 3

Gene SYNCRIP, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-203ENST00000444272 C1QTNF1Q9BXJ1 281 aa18.76■□□□□ 0.59
SYNCRIP-203ENST00000444272 COA1Q9GZY4 146 aa18.76■□□□□ 0.59
SYNCRIP-203ENST00000444272 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.76■□□□□ 0.595e-7■■■■■ 45.1
SYNCRIP-203ENST00000444272 FLT3LGP49771 235 aa18.75■□□□□ 0.59
SYNCRIP-203ENST00000444272 CDAN1Q8IWY9 1227 aa18.75■□□□□ 0.59
SYNCRIP-203ENST00000444272 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.75■□□□□ 0.59
SYNCRIP-203ENST00000444272 PXYLP1Q8TE99 480 aa18.75■□□□□ 0.59
SYNCRIP-203ENST00000444272 UHRF1Q96T88 793 aaPredicted RBP18.75■□□□□ 0.59
SYNCRIP-203ENST00000444272 SPDYE2BA6NHP3 402 aa18.74■□□□□ 0.59
SYNCRIP-203ENST00000444272 IRF6O14896 467 aa18.74■□□□□ 0.59
SYNCRIP-203ENST00000444272 SPDYE6P0CI01 402 aa18.74■□□□□ 0.59
SYNCRIP-203ENST00000444272 GTF2IP78347 998 aa18.74■□□□□ 0.59
SYNCRIP-203ENST00000444272 CFAP100Q494V2 611 aa18.74■□□□□ 0.59
SYNCRIP-203ENST00000444272 PRMT6Q96LA8 375 aaPredicted RBP18.74■□□□□ 0.59
SYNCRIP-203ENST00000444272 ATP5J2-PTCD1G3V325 749 aa18.73■□□□□ 0.59
SYNCRIP-203ENST00000444272 TXNRD3Q86VQ6 643 aa18.73■□□□□ 0.59
SYNCRIP-203ENST00000444272 CCDC85AQ96PX6 553 aaPredicted RBP18.73■□□□□ 0.59
SYNCRIP-203ENST00000444272 PDHXO00330 501 aa18.72■□□□□ 0.59
SYNCRIP-203ENST00000444272 ERO1BQ86YB8 467 aa18.72■□□□□ 0.59
SYNCRIP-203ENST00000444272 ISCA1Q9BUE6 129 aa18.72■□□□□ 0.59
SYNCRIP-203ENST00000444272 TAOK2Q9UL54 1235 aa18.72■□□□□ 0.59
SYNCRIP-203ENST00000444272 SNCAIPQ9Y6H5 919 aa18.72■□□□□ 0.59
SYNCRIP-203ENST00000444272 PFASO15067 1338 aa18.72■□□□□ 0.59
SYNCRIP-203ENST00000444272 F8W031 263 aaPredicted RBP18.71■□□□□ 0.59
SYNCRIP-203ENST00000444272 CC2D1BQ5T0F9 858 aaKnown RBP18.71■□□□□ 0.59
SYNCRIP-203ENST00000444272 ANKRD18AQ8IVF6 992 aa18.71■□□□□ 0.59
SYNCRIP-203ENST00000444272 SPEF2Q9C093 1822 aa18.71■□□□□ 0.59
SYNCRIP-203ENST00000444272 ANKRD23Q86SG2 305 aa18.7■□□□□ 0.58
SYNCRIP-203ENST00000444272 DLG5Q8TDM6 1919 aa18.7■□□□□ 0.58
SYNCRIP-203ENST00000444272 ARAP2Q8WZ64 1704 aa18.69■□□□□ 0.58
SYNCRIP-203ENST00000444272 MUC6Q6W4X9 2439 aa18.69■□□□□ 0.58
SYNCRIP-203ENST00000444272 BCRP11274 1271 aa18.69■□□□□ 0.58
SYNCRIP-203ENST00000444272 CCT4P50991 539 aaKnown RBP18.69■□□□□ 0.58
SYNCRIP-203ENST00000444272 PPIL2Q13356 520 aa18.69■□□□□ 0.58
SYNCRIP-203ENST00000444272 IRF5Q13568 498 aa18.69■□□□□ 0.58
SYNCRIP-203ENST00000444272 TNFAIP1Q13829 316 aa18.69■□□□□ 0.58
SYNCRIP-203ENST00000444272 CCDC152Q4G0S7 254 aa18.69■□□□□ 0.58
SYNCRIP-203ENST00000444272 CERS5Q8N5B7 392 aa18.69■□□□□ 0.58
SYNCRIP-203ENST00000444272 ATXN2LQ8WWM7 1075 aaKnown RBP18.69■□□□□ 0.58
SYNCRIP-203ENST00000444272 TEPSINQ96N21 525 aa18.69■□□□□ 0.58
SYNCRIP-203ENST00000444272 LBHD1Q9BQE6 289 aaPredicted RBP18.69■□□□□ 0.58
SYNCRIP-203ENST00000444272 LRFN3Q9BTN0 628 aa18.69■□□□□ 0.58
SYNCRIP-203ENST00000444272 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.68■□□□□ 0.58
SYNCRIP-203ENST00000444272 ASB2Q96Q27 587 aa18.68■□□□□ 0.58
SYNCRIP-203ENST00000444272 XIRP2A4UGR9 3374 aa18.67■□□□□ 0.58
SYNCRIP-203ENST00000444272 RBM5P52756 815 aaKnown RBP eCLIP18.67■□□□□ 0.58
SYNCRIP-203ENST00000444272 ZKSCAN4Q969J2 545 aaPredicted RBP18.67■□□□□ 0.58
SYNCRIP-203ENST00000444272 KLRK1P26718 216 aa18.66■□□□□ 0.58
SYNCRIP-203ENST00000444272 LRRC26Q2I0M4 334 aa18.66■□□□□ 0.58
SYNCRIP-203ENST00000444272 TNPO2O14787 897 aaKnown RBP18.65■□□□□ 0.58
SYNCRIP-203ENST00000444272 PARK7Q99497 189 aaKnown RBP18.65■□□□□ 0.58
SYNCRIP-203ENST00000444272 TMEM39BQ9GZU3 492 aa18.65■□□□□ 0.58
SYNCRIP-203ENST00000444272 THEGQ9P2T0 379 aa18.65■□□□□ 0.58
SYNCRIP-203ENST00000444272 MINPP1Q9UNW1 487 aa18.65■□□□□ 0.58
SYNCRIP-203ENST00000444272 U2AF1L5P0DN76 240 aaPredicted RBP18.64■□□□□ 0.57
SYNCRIP-203ENST00000444272 CYP2C8P10632 490 aa18.64■□□□□ 0.57
SYNCRIP-203ENST00000444272 SMAD3P84022 425 aaKnown RBP18.64■□□□□ 0.57
SYNCRIP-203ENST00000444272 U2AF1Q01081 240 aaKnown RBP eCLIP18.64■□□□□ 0.57
SYNCRIP-203ENST00000444272 SHHQ15465 462 aa18.64■□□□□ 0.57
SYNCRIP-203ENST00000444272 PLBD2Q8NHP8 589 aa18.64■□□□□ 0.57
SYNCRIP-203ENST00000444272 PPM1EQ8WY54 764 aa18.64■□□□□ 0.57
SYNCRIP-203ENST00000444272 WRNIP1Q96S55 665 aa18.64■□□□□ 0.57
SYNCRIP-203ENST00000444272 ZNF70Q9UC06 446 aaPredicted RBP18.64■□□□□ 0.57
SYNCRIP-203ENST00000444272 OGDHLQ9ULD0 1010 aa18.64■□□□□ 0.57
SYNCRIP-203ENST00000444272 SPDYE2Q495Y8 402 aa18.63■□□□□ 0.57
SYNCRIP-203ENST00000444272 IL27Q8NEV9 243 aa18.63■□□□□ 0.57
SYNCRIP-203ENST00000444272 P2RX7Q99572 595 aaKnown RBP18.63■□□□□ 0.57
SYNCRIP-203ENST00000444272 LTBP2Q14767 1821 aa18.63■□□□□ 0.57
SYNCRIP-203ENST00000444272 TCP10L2B9ZVM9 353 aa18.62■□□□□ 0.57
SYNCRIP-203ENST00000444272 CNGB1Q14028 1251 aaPredicted RBP18.62■□□□□ 0.57
SYNCRIP-203ENST00000444272 C9orf50Q5SZB4 431 aa18.62■□□□□ 0.57
SYNCRIP-203ENST00000444272 ZBTB38Q8NAP3 1195 aaPredicted RBP18.62■□□□□ 0.57
SYNCRIP-203ENST00000444272 NECAB3Q96P71 396 aaPredicted RBP18.62■□□□□ 0.57
SYNCRIP-203ENST00000444272 HMX1Q9NP08 348 aaPredicted RBP18.62■□□□□ 0.57
SYNCRIP-203ENST00000444272 DOCK3Q8IZD9 2030 aa18.62■□□□□ 0.57
SYNCRIP-203ENST00000444272 COL6A1P12109 1028 aa18.61■□□□□ 0.57
SYNCRIP-203ENST00000444272 HSP90B1P14625 803 aaKnown RBP18.61■□□□□ 0.57
SYNCRIP-203ENST00000444272 MRPS5P82675 430 aaKnown RBP18.61■□□□□ 0.57
SYNCRIP-203ENST00000444272 PPATQ06203 517 aa18.61■□□□□ 0.57
SYNCRIP-203ENST00000444272 GRIN2CQ14957 1233 aa18.61■□□□□ 0.57
SYNCRIP-203ENST00000444272 TDRD3Q9H7E2 651 aaKnown RBP18.61■□□□□ 0.57
SYNCRIP-203ENST00000444272 TSPYL4Q9UJ04 414 aa18.61■□□□□ 0.57
SYNCRIP-203ENST00000444272 MAST2Q6P0Q8 1798 aa18.6■□□□□ 0.57
SYNCRIP-203ENST00000444272 HMGCRP04035 888 aa18.6■□□□□ 0.57
SYNCRIP-203ENST00000444272 MRE11P49959 708 aa18.6■□□□□ 0.57
SYNCRIP-203ENST00000444272 CDC5LQ99459 802 aaKnown RBP18.6■□□□□ 0.57
SYNCRIP-203ENST00000444272 CD209Q9NNX6 404 aa18.6■□□□□ 0.57
SYNCRIP-203ENST00000444272 NUDCQ9Y266 331 aa18.6■□□□□ 0.57
SYNCRIP-203ENST00000444272 LEMD3Q9Y2U8 911 aa18.6■□□□□ 0.57
SYNCRIP-203ENST00000444272 TCF20Q9UGU0 1960 aaKnown RBP18.59■□□□□ 0.57
SYNCRIP-203ENST00000444272 PDE8AO60658 829 aa18.59■□□□□ 0.57
SYNCRIP-203ENST00000444272 EIF4G2P78344 907 aaKnown RBP eCLIP18.59■□□□□ 0.57
SYNCRIP-203ENST00000444272 TRIM32Q13049 653 aa18.59■□□□□ 0.57
SYNCRIP-203ENST00000444272 MOGSQ13724 837 aa18.59■□□□□ 0.57
SYNCRIP-203ENST00000444272 BSDC1Q9NW68 430 aaPredicted RBP18.59■□□□□ 0.57
SYNCRIP-203ENST00000444272 TNNI2P48788 182 aa18.58■□□□□ 0.56
SYNCRIP-203ENST00000444272 TMEM31Q5JXX7 168 aa18.58■□□□□ 0.56
SYNCRIP-203ENST00000444272 JARID2Q92833 1246 aaPredicted RBP18.58■□□□□ 0.56
SYNCRIP-203ENST00000444272 COA7Q96BR5 231 aa18.58■□□□□ 0.56
SYNCRIP-203ENST00000444272 EPHX3Q9H6B9 360 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms