RNA–Protein interactions for RNA: ENST00000441871.5

R3HDM1-209, Transcript of R3H domain containing 1, humanhuman

TSL 4

Gene R3HDM1, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-209ENST00000441871 PPP4R3AQ6IN85 833 aa4.7□□□□□ -1.66
R3HDM1-209ENST00000441871 OTUD6AQ7L8S5 288 aa4.7□□□□□ -1.66
R3HDM1-209ENST00000441871 WAPLQ7Z5K2 1190 aa4.7□□□□□ -1.66
R3HDM1-209ENST00000441871 PODNQ7Z5L7 613 aa4.7□□□□□ -1.66
R3HDM1-209ENST00000441871 C11orf74Q86VG3 221 aa4.7□□□□□ -1.66
R3HDM1-209ENST00000441871 SNX32Q86XE0 403 aa4.7□□□□□ -1.66
R3HDM1-209ENST00000441871 IQCF2Q8IXL9 164 aa4.7□□□□□ -1.66
R3HDM1-209ENST00000441871 SAMD14Q8IZD0 417 aaPredicted RBP4.7□□□□□ -1.66
R3HDM1-209ENST00000441871 STK11IPQ8N1F8 1099 aa4.7□□□□□ -1.66
R3HDM1-209ENST00000441871 ANKRD42Q8N9B4 389 aa4.7□□□□□ -1.66
R3HDM1-209ENST00000441871 TTC8Q8TAM2 541 aa4.7□□□□□ -1.66
R3HDM1-209ENST00000441871 APPBP2Q92624 585 aa4.7□□□□□ -1.66
R3HDM1-209ENST00000441871 ZNF775Q96BV0 537 aaPredicted RBP4.7□□□□□ -1.66
R3HDM1-209ENST00000441871 PGBD4Q96DM1 585 aa4.7□□□□□ -1.66
R3HDM1-209ENST00000441871 TBC1D31Q96DN5 1066 aa4.7□□□□□ -1.66
R3HDM1-209ENST00000441871 TRIM47Q96LD4 638 aa4.7□□□□□ -1.66
R3HDM1-209ENST00000441871 XPO4Q9C0E2 1151 aaKnown RBP4.7□□□□□ -1.66
R3HDM1-209ENST00000441871 C9orf78Q9NZ63 289 aaPredicted RBP4.7□□□□□ -1.66
R3HDM1-209ENST00000441871 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.7□□□□□ -1.66
R3HDM1-209ENST00000441871 SUN2Q9UH99 717 aa4.7□□□□□ -1.66
R3HDM1-209ENST00000441871 RABL2BQ9UNT1 228 aa4.7□□□□□ -1.66
R3HDM1-209ENST00000441871 SPG7Q9UQ90 795 aa4.7□□□□□ -1.66
R3HDM1-209ENST00000441871 DAAM1Q9Y4D1 1078 aa4.7□□□□□ -1.66
R3HDM1-209ENST00000441871 GPSM3Q9Y4H4 160 aa4.7□□□□□ -1.66
R3HDM1-209ENST00000441871 MAP4K5Q9Y4K4 846 aa4.7□□□□□ -1.66
R3HDM1-209ENST00000441871 SHTN1A0MZ66 631 aa4.69□□□□□ -1.66
R3HDM1-209ENST00000441871 C19orf81C9J6K1 198 aa4.69□□□□□ -1.66
R3HDM1-209ENST00000441871 hCG_1984214I3L0E3 225 aa4.69□□□□□ -1.66
R3HDM1-209ENST00000441871 SCGB1D2O95969 90 aa4.69□□□□□ -1.66
R3HDM1-209ENST00000441871 CCDC175P0C221 793 aa4.69□□□□□ -1.66
R3HDM1-209ENST00000441871 BMP1P13497 986 aa4.69□□□□□ -1.66
R3HDM1-209ENST00000441871 RACK1P63244 317 aaKnown RBP4.69□□□□□ -1.66
R3HDM1-209ENST00000441871 SFSWAPQ12872 951 aaKnown RBP4.69□□□□□ -1.66
R3HDM1-209ENST00000441871 TMED1Q13445 227 aa4.69□□□□□ -1.66
R3HDM1-209ENST00000441871 PUM3Q15397 648 aaKnown RBP4.69□□□□□ -1.66
R3HDM1-209ENST00000441871 ECM1Q16610 540 aa4.69□□□□□ -1.66
R3HDM1-209ENST00000441871 ERFEQ4G0M1 354 aa4.69□□□□□ -1.66
R3HDM1-209ENST00000441871 C4orf48Q5BLP8 95 aa4.69□□□□□ -1.66
R3HDM1-209ENST00000441871 ANKRD45Q5TZF3 282 aa4.69□□□□□ -1.66
R3HDM1-209ENST00000441871 JAKMIP3Q5VZ66 844 aa4.69□□□□□ -1.66
R3HDM1-209ENST00000441871 MRPL14Q6P1L8 145 aaKnown RBP4.69□□□□□ -1.66
R3HDM1-209ENST00000441871 CPLX2Q6PUV4 134 aaKnown RBP4.69□□□□□ -1.66
R3HDM1-209ENST00000441871 C16orf54Q6UWD8 224 aa4.69□□□□□ -1.66
R3HDM1-209ENST00000441871 NFXL1Q6ZNB6 911 aa4.69□□□□□ -1.66
R3HDM1-209ENST00000441871 TMC4Q7Z404 712 aa4.69□□□□□ -1.66
R3HDM1-209ENST00000441871 SH3RF1Q7Z6J0 888 aa4.69□□□□□ -1.66
R3HDM1-209ENST00000441871 KIAA0907Q7Z7F0 614 aaPredicted RBP4.69□□□□□ -1.66
R3HDM1-209ENST00000441871 DAAM2Q86T65 1068 aa4.69□□□□□ -1.66
R3HDM1-209ENST00000441871 RASSF3Q86WH2 238 aa4.69□□□□□ -1.66
R3HDM1-209ENST00000441871 TRMT44Q8IYL2 757 aaKnown RBP4.69□□□□□ -1.66
R3HDM1-209ENST00000441871 CCDC116Q8IYX3 515 aa4.69□□□□□ -1.66
R3HDM1-209ENST00000441871 ZNF654Q8IZM8 581 aa4.69□□□□□ -1.66
R3HDM1-209ENST00000441871 CLASRPQ8N2M8 674 aaKnown RBP4.69□□□□□ -1.66
R3HDM1-209ENST00000441871 APPL2Q8NEU8 664 aa4.69□□□□□ -1.66
R3HDM1-209ENST00000441871 C1orf216Q8TAB5 229 aa4.69□□□□□ -1.66
R3HDM1-209ENST00000441871 FAM200AQ8TCP9 573 aa4.69□□□□□ -1.66
R3HDM1-209ENST00000441871 NUDT16Q96DE0 195 aaKnown RBP4.69□□□□□ -1.66
R3HDM1-209ENST00000441871 DHX36Q9H2U1 1008 aaKnown RBP4.69□□□□□ -1.66
R3HDM1-209ENST00000441871 KANSL2Q9H9L4 492 aa4.69□□□□□ -1.66
R3HDM1-209ENST00000441871 CGNQ9P2M7 1197 aaKnown RBP4.69□□□□□ -1.66
R3HDM1-209ENST00000441871 VTI1BQ9UEU0 232 aa4.69□□□□□ -1.66
R3HDM1-209ENST00000441871 EMILIN1Q9Y6C2 1016 aa4.69□□□□□ -1.66
R3HDM1-209ENST00000441871 WASHC2AQ641Q2 1341 aa4.69□□□□□ -1.66
R3HDM1-209ENST00000441871 FAM170AA1A519 330 aa4.68□□□□□ -1.66
R3HDM1-209ENST00000441871 FAM196BA6NMK8 535 aa4.68□□□□□ -1.66
R3HDM1-209ENST00000441871 USP17L15C9J2P7 530 aa4.68□□□□□ -1.66
R3HDM1-209ENST00000441871 USP17L10C9JJH3 530 aa4.68□□□□□ -1.66
R3HDM1-209ENST00000441871 USP17L13C9JLJ4 530 aa4.68□□□□□ -1.66
R3HDM1-209ENST00000441871 USP17L12C9JPN9 530 aa4.68□□□□□ -1.66
R3HDM1-209ENST00000441871 USP17L11C9JVI0 530 aa4.68□□□□□ -1.66
R3HDM1-209ENST00000441871 USP17L21D6R901 530 aa4.68□□□□□ -1.66
R3HDM1-209ENST00000441871 USP17L18D6R9N7 530 aa4.68□□□□□ -1.66
R3HDM1-209ENST00000441871 USP17L22D6RA61 530 aa4.68□□□□□ -1.66
R3HDM1-209ENST00000441871 USP17L17D6RBQ6 530 aa4.68□□□□□ -1.66
R3HDM1-209ENST00000441871 USP17L19D6RCP7 530 aa4.68□□□□□ -1.66
R3HDM1-209ENST00000441871 USP17L20D6RJB6 530 aa4.68□□□□□ -1.66
R3HDM1-209ENST00000441871 HTATSF1O43719 755 aaKnown RBP4.68□□□□□ -1.66
R3HDM1-209ENST00000441871 BAIAP3O94812 1187 aa4.68□□□□□ -1.66
R3HDM1-209ENST00000441871 IFIT2P09913 472 aaKnown RBP4.68□□□□□ -1.66
R3HDM1-209ENST00000441871 BMP2P12643 396 aa4.68□□□□□ -1.66
R3HDM1-209ENST00000441871 TIMP2P16035 220 aa4.68□□□□□ -1.66
R3HDM1-209ENST00000441871 ATF4P18848 351 aaPredicted RBP4.68□□□□□ -1.66
R3HDM1-209ENST00000441871 KIF5BP33176 963 aa4.68□□□□□ -1.66
R3HDM1-209ENST00000441871 HALP42357 657 aa4.68□□□□□ -1.66
R3HDM1-209ENST00000441871 SARSP49591 514 aaKnown RBP4.68□□□□□ -1.66
R3HDM1-209ENST00000441871 SNX16P57768 344 aa4.68□□□□□ -1.66
R3HDM1-209ENST00000441871 CCT2P78371 535 aaKnown RBP4.68□□□□□ -1.66
R3HDM1-209ENST00000441871 USP17L24Q0WX57 530 aa4.68□□□□□ -1.66
R3HDM1-209ENST00000441871 PDE1CQ14123 709 aaPredicted RBP4.68□□□□□ -1.66
R3HDM1-209ENST00000441871 ZCCHC8Q6NZY4 707 aaKnown RBP4.68□□□□□ -1.66
R3HDM1-209ENST00000441871 MMS22LQ6ZRQ5 1243 aa4.68□□□□□ -1.66
R3HDM1-209ENST00000441871 ZNF354CQ86Y25 554 aa4.68□□□□□ -1.66
R3HDM1-209ENST00000441871 IFNL2Q8IZJ0 200 aa4.68□□□□□ -1.66
R3HDM1-209ENST00000441871 MIGA1Q8NAN2 632 aa4.68□□□□□ -1.66
R3HDM1-209ENST00000441871 SH3TC2Q8TF17 1288 aa4.68□□□□□ -1.66
R3HDM1-209ENST00000441871 SLC16A10Q8TF71 515 aa4.68□□□□□ -1.66
R3HDM1-209ENST00000441871 ZFPM2Q8WW38 1151 aa4.68□□□□□ -1.66
R3HDM1-209ENST00000441871 NELL1Q92832 810 aa4.68□□□□□ -1.66
R3HDM1-209ENST00000441871 KCTD15Q96SI1 283 aaPredicted RBP4.68□□□□□ -1.66
R3HDM1-209ENST00000441871 C2orf49Q9BVC5 232 aaPredicted RBP4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 135.1 ms