RNA–Protein interactions for RNA: ENST00000441080.2

PFDN4-202, Transcript of prefoldin subunit 4, humanhuman

TSL 5

Gene PFDN4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-202ENST00000441080 NOC4LQ9BVI4 516 aaKnown RBP8.14□□□□□ -1.11
PFDN4-202ENST00000441080 RNF225M0QZC1 329 aaPredicted RBP8.13□□□□□ -1.11
PFDN4-202ENST00000441080 DLL1O00548 723 aa8.13□□□□□ -1.11
PFDN4-202ENST00000441080 TM4SF5O14894 197 aa8.13□□□□□ -1.11
PFDN4-202ENST00000441080 PAGE1O75459 146 aa8.13□□□□□ -1.11
PFDN4-202ENST00000441080 SPATA31C1P0DKV0 1188 aa8.13□□□□□ -1.11
PFDN4-202ENST00000441080 COL8A1P27658 744 aa8.13□□□□□ -1.11
PFDN4-202ENST00000441080 ZNF76P36508 570 aa8.13□□□□□ -1.11
PFDN4-202ENST00000441080 AP3B2Q13367 1082 aa8.13□□□□□ -1.11
PFDN4-202ENST00000441080 SULF2Q8IWU5 870 aa8.13□□□□□ -1.11
PFDN4-202ENST00000441080 METTL5Q9NRN9 209 aaKnown RBP8.13□□□□□ -1.11
PFDN4-202ENST00000441080 DDX3YO15523 660 aaKnown RBP8.12□□□□□ -1.11
PFDN4-202ENST00000441080 ADAM11O75078 769 aa8.12□□□□□ -1.11
PFDN4-202ENST00000441080 CYP11A1P05108 521 aa8.12□□□□□ -1.11
PFDN4-202ENST00000441080 FANCCQ00597 558 aa8.12□□□□□ -1.11
PFDN4-202ENST00000441080 MAP3K11Q16584 847 aa8.12□□□□□ -1.11
PFDN4-202ENST00000441080 TRIM56Q9BRZ2 755 aaKnown RBP8.12□□□□□ -1.11
PFDN4-202ENST00000441080 USP26Q9BXU7 913 aa8.12□□□□□ -1.11
PFDN4-202ENST00000441080 KCNK4Q9NYG8 393 aa8.12□□□□□ -1.11
PFDN4-202ENST00000441080 SAMM50Q9Y512 469 aa8.12□□□□□ -1.11
PFDN4-202ENST00000441080 NME2P22392 152 aa8.11□□□□□ -1.11
PFDN4-202ENST00000441080 GRIK4Q16099 956 aa8.11□□□□□ -1.11
PFDN4-202ENST00000441080 HS2ST1Q7LGA3 356 aa8.11□□□□□ -1.11
PFDN4-202ENST00000441080 RNF34Q969K3 372 aa8.11□□□□□ -1.11
PFDN4-202ENST00000441080 CORO1BQ9BR76 489 aa8.11□□□□□ -1.11
PFDN4-202ENST00000441080 RLBP1P12271 317 aa8.1□□□□□ -1.11
PFDN4-202ENST00000441080 TCF3P15923 654 aa8.1□□□□□ -1.11
PFDN4-202ENST00000441080 MAOBP27338 520 aa8.1□□□□□ -1.11
PFDN4-202ENST00000441080 ARNTP27540 789 aa8.1□□□□□ -1.11
PFDN4-202ENST00000441080 POU4F3Q15319 338 aa8.1□□□□□ -1.11
PFDN4-202ENST00000441080 PCNX4Q63HM2 1172 aa8.1□□□□□ -1.11
PFDN4-202ENST00000441080 TTBK2Q6IQ55 1244 aa8.1□□□□□ -1.11
PFDN4-202ENST00000441080 IGF2-ASQ6U949 168 aa8.1□□□□□ -1.11
PFDN4-202ENST00000441080 ALYREFQ86V81 257 aaKnown RBP8.1□□□□□ -1.11
PFDN4-202ENST00000441080 UBASH3BQ8TF42 649 aa8.1□□□□□ -1.11
PFDN4-202ENST00000441080 EMILIN2Q9BXX0 1053 aa8.1□□□□□ -1.11
PFDN4-202ENST00000441080 NRSN2Q9GZP1 204 aa8.1□□□□□ -1.11
PFDN4-202ENST00000441080 CBX8Q9HC52 389 aa8.1□□□□□ -1.11
PFDN4-202ENST00000441080 GGT7Q9UJ14 662 aa8.1□□□□□ -1.11
PFDN4-202ENST00000441080 LIG3P49916 1009 aa8.09□□□□□ -1.11
PFDN4-202ENST00000441080 DUOXA2Q1HG44 320 aa8.09□□□□□ -1.11
PFDN4-202ENST00000441080 SHISA2Q6UWI4 295 aa8.09□□□□□ -1.11
PFDN4-202ENST00000441080 STK35Q8TDR2 534 aa8.09□□□□□ -1.11
PFDN4-202ENST00000441080 MRPL18Q9H0U6 180 aaKnown RBP8.09□□□□□ -1.11
PFDN4-202ENST00000441080 LOC100289279A0A1B0GTE1 492 aa8.08□□□□□ -1.12
PFDN4-202ENST00000441080 WISP1O95388 367 aa8.08□□□□□ -1.12
PFDN4-202ENST00000441080 APBA3O96018 575 aa8.08□□□□□ -1.12
PFDN4-202ENST00000441080 GSTP1P09211 210 aaKnown RBP8.08□□□□□ -1.12
PFDN4-202ENST00000441080 BMP6P22004 513 aa8.08□□□□□ -1.12
PFDN4-202ENST00000441080 HDLBPQ00341 1268 aaKnown RBP8.08□□□□□ -1.12
PFDN4-202ENST00000441080 PWP1Q13610 501 aa8.08□□□□□ -1.12
PFDN4-202ENST00000441080 ACAD11Q709F0 780 aa8.08□□□□□ -1.12
PFDN4-202ENST00000441080 ERMP1Q7Z2K6 904 aa8.08□□□□□ -1.12
PFDN4-202ENST00000441080 NACC1Q96RE7 527 aa8.08□□□□□ -1.12
PFDN4-202ENST00000441080 F6X3S4 739 aa8.07□□□□□ -1.12
PFDN4-202ENST00000441080 ECEL1O95672 775 aa8.07□□□□□ -1.12
PFDN4-202ENST00000441080 SELPP16109 830 aa8.07□□□□□ -1.12
PFDN4-202ENST00000441080 LMNB1P20700 586 aa8.07□□□□□ -1.12
PFDN4-202ENST00000441080 PDE3AQ14432 1141 aa8.07□□□□□ -1.12
PFDN4-202ENST00000441080 LRRC14Q15048 493 aa8.07□□□□□ -1.12
PFDN4-202ENST00000441080 HP1BP3Q5SSJ5 553 aaPredicted RBP8.07□□□□□ -1.12
PFDN4-202ENST00000441080 PDZD3Q86UT5 571 aa8.07□□□□□ -1.12
PFDN4-202ENST00000441080 RELL1Q8IUW5 271 aa8.07□□□□□ -1.12
PFDN4-202ENST00000441080 KCNB2Q92953 911 aa8.07□□□□□ -1.12
PFDN4-202ENST00000441080 ZC3H12CQ9C0D7 883 aaKnown RBP8.07□□□□□ -1.12
PFDN4-202ENST00000441080 KBTBD4Q9NVX7 518 aa8.07□□□□□ -1.12
PFDN4-202ENST00000441080 USP21Q9UK80 565 aa8.07□□□□□ -1.12
PFDN4-202ENST00000441080 CYP8B1Q9UNU6 501 aa8.07□□□□□ -1.12
PFDN4-202ENST00000441080 CTSBP07858 339 aa8.06□□□□□ -1.12
PFDN4-202ENST00000441080 GBP2P32456 591 aaPredicted RBP8.06□□□□□ -1.12
PFDN4-202ENST00000441080 RPS26P62854 115 aaKnown RBP8.06□□□□□ -1.12
PFDN4-202ENST00000441080 RASIP1Q5U651 963 aa8.06□□□□□ -1.12
PFDN4-202ENST00000441080 C9orf131Q5VYM1 1079 aa8.06□□□□□ -1.12
PFDN4-202ENST00000441080 MAP1SQ66K74 1059 aaPredicted RBP8.06□□□□□ -1.12
PFDN4-202ENST00000441080 LLGL2Q6P1M3 1020 aa8.06□□□□□ -1.12
PFDN4-202ENST00000441080 METTL16Q86W50 562 aaKnown RBP8.06□□□□□ -1.12
PFDN4-202ENST00000441080 GRIN3AQ8TCU5 1115 aa8.06□□□□□ -1.12
PFDN4-202ENST00000441080 RSRP1Q9BUV0 290 aa8.06□□□□□ -1.12
PFDN4-202ENST00000441080 RUSC1Q9BVN2 902 aa8.06□□□□□ -1.12
PFDN4-202ENST00000441080 COPRSQ9NQ92 184 aa8.06□□□□□ -1.12
PFDN4-202ENST00000441080 TLR6Q9Y2C9 796 aa8.06□□□□□ -1.12
PFDN4-202ENST00000441080 C9orf172C9J069 976 aa8.05□□□□□ -1.12
PFDN4-202ENST00000441080 HNRNPUQ00839 825 aaKnown RBP eCLIP8.05□□□□□ -1.12
PFDN4-202ENST00000441080 NRG1Q02297 640 aaPredicted RBP8.05□□□□□ -1.12
PFDN4-202ENST00000441080 ZNF252P-AS1Q0IIN9 211 aa8.05□□□□□ -1.12
PFDN4-202ENST00000441080 AGMOQ6ZNB7 445 aa8.05□□□□□ -1.12
PFDN4-202ENST00000441080 KIAA1211Q6ZU35 1233 aa8.05□□□□□ -1.12
PFDN4-202ENST00000441080 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.05□□□□□ -1.12
PFDN4-202ENST00000441080 NT5DC4Q86YG4 428 aa8.05□□□□□ -1.12
PFDN4-202ENST00000441080 PHC3Q8NDX5 983 aa8.05□□□□□ -1.12
PFDN4-202ENST00000441080 LENG1Q96BZ8 264 aaPredicted RBP8.05□□□□□ -1.12
PFDN4-202ENST00000441080 TMEM74Q96NL1 305 aa8.05□□□□□ -1.12
PFDN4-202ENST00000441080 KRT82Q9NSB4 513 aa8.05□□□□□ -1.12
PFDN4-202ENST00000441080 IGSF5Q9NSI5 407 aa8.05□□□□□ -1.12
PFDN4-202ENST00000441080 DLGAP3O95886 979 aa8.04□□□□□ -1.12
PFDN4-202ENST00000441080 USP48Q86UV5 1035 aa8.04□□□□□ -1.12
PFDN4-202ENST00000441080 RNF208Q9H0X6 261 aa8.04□□□□□ -1.12
PFDN4-202ENST00000441080 CCDC86Q9H6F5 360 aaKnown RBP8.04□□□□□ -1.12
PFDN4-202ENST00000441080 MINDY4BA8MYZ0 360 aa8.03□□□□□ -1.12
PFDN4-202ENST00000441080 F8W735 103 aaPredicted RBP8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms