RNA–Protein interactions for RNA: ENST00000440240.5

CPNE1-219, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-219ENST00000440240 IFNL1Q8IU54 200 aa26■■□□□ 1.75
CPNE1-219ENST00000440240 IQSEC3Q9UPP2 1182 aaPredicted RBP26■■□□□ 1.75
CPNE1-219ENST00000440240 IFIT1P09914 478 aaKnown RBP25.99■■□□□ 1.75
CPNE1-219ENST00000440240 CHAF1AQ13111 956 aaPredicted RBP25.99■■□□□ 1.75
CPNE1-219ENST00000440240 KLHDC4Q8TBB5 520 aa25.99■■□□□ 1.75
CPNE1-219ENST00000440240 MRIQ9BWK5 157 aa25.99■■□□□ 1.75
CPNE1-219ENST00000440240 SMC4Q9NTJ3 1288 aa25.99■■□□□ 1.75
CPNE1-219ENST00000440240 HPS5Q9UPZ3 1129 aa25.99■■□□□ 1.75
CPNE1-219ENST00000440240 KIF16BQ96L93 1317 aa25.98■■□□□ 1.75
CPNE1-219ENST00000440240 BCAMP50895 628 aa25.98■■□□□ 1.75
CPNE1-219ENST00000440240 PUM3Q15397 648 aaKnown RBP25.98■■□□□ 1.75
CPNE1-219ENST00000440240 OTUD7BQ6GQQ9 843 aa25.98■■□□□ 1.75
CPNE1-219ENST00000440240 CDCA7LQ96GN5 454 aa25.98■■□□□ 1.75
CPNE1-219ENST00000440240 CT47B1P0C2W7 299 aaPredicted RBP25.97■■□□□ 1.75
CPNE1-219ENST00000440240 TEKT1Q969V4 418 aa25.97■■□□□ 1.75
CPNE1-219ENST00000440240 R3HDMLQ9H3Y0 253 aa25.97■■□□□ 1.75
CPNE1-219ENST00000440240 SUGT1Q9Y2Z0 365 aa25.97■■□□□ 1.75
CPNE1-219ENST00000440240 TCP10L2B9ZVM9 353 aa25.96■■□□□ 1.75
CPNE1-219ENST00000440240 EYA2O00167 538 aa25.96■■□□□ 1.75
CPNE1-219ENST00000440240 SOX10P56693 466 aa25.96■■□□□ 1.75
CPNE1-219ENST00000440240 TRMT2AQ8IZ69 625 aaKnown RBP25.96■■□□□ 1.75
CPNE1-219ENST00000440240 TEPSINQ96N21 525 aa25.96■■□□□ 1.75
CPNE1-219ENST00000440240 FGFR2P21802 821 aa25.95■■□□□ 1.74
CPNE1-219ENST00000440240 GRIK5Q16478 980 aa25.95■■□□□ 1.74
CPNE1-219ENST00000440240 FBXO46Q6PJ61 603 aaPredicted RBP25.95■■□□□ 1.74
CPNE1-219ENST00000440240 RFX5P48382 616 aaPredicted RBP25.94■■□□□ 1.74
CPNE1-219ENST00000440240 LPIN2Q92539 896 aa25.94■■□□□ 1.74
CPNE1-219ENST00000440240 TMEM39BQ9GZU3 492 aa25.94■■□□□ 1.74
CPNE1-219ENST00000440240 HDAC5Q9UQL6 1122 aa25.94■■□□□ 1.74
CPNE1-219ENST00000440240 MAST3O60307 1309 aa25.93■■□□□ 1.74
CPNE1-219ENST00000440240 IGF2BP3O00425 579 aaKnown RBP eCLIP25.93■■□□□ 1.74
CPNE1-219ENST00000440240 UBTFL1P0CB47 393 aaPredicted RBP25.93■■□□□ 1.74
CPNE1-219ENST00000440240 SLC5A1P13866 664 aa25.93■■□□□ 1.74
CPNE1-219ENST00000440240 ZDHHC15Q96MV8 337 aa25.93■■□□□ 1.74
CPNE1-219ENST00000440240 TMOD2Q9NZR1 351 aa25.93■■□□□ 1.74
CPNE1-219ENST00000440240 FBXO3Q9UK99 471 aa25.93■■□□□ 1.74
CPNE1-219ENST00000440240 TESPA1A2RU30 521 aaPredicted RBP25.92■■□□□ 1.74
CPNE1-219ENST00000440240 MAP3K9P80192 1104 aa25.92■■□□□ 1.74
CPNE1-219ENST00000440240 ELP3Q9H9T3 547 aa25.92■■□□□ 1.74
CPNE1-219ENST00000440240 GJA5P36382 358 aa25.91■■□□□ 1.74
CPNE1-219ENST00000440240 HHIPL2Q6UWX4 724 aa25.91■■□□□ 1.74
CPNE1-219ENST00000440240 WDR66Q8TBY9 1149 aa25.91■■□□□ 1.74
CPNE1-219ENST00000440240 OPTNQ96CV9 577 aa25.91■■□□□ 1.74
CPNE1-219ENST00000440240 FKBP1CQ5VVH2 108 aa25.9■■□□□ 1.74
CPNE1-219ENST00000440240 PPP1R3FQ6ZSY5 799 aaPredicted RBP25.9■■□□□ 1.74
CPNE1-219ENST00000440240 CDAN1Q8IWY9 1227 aa25.9■■□□□ 1.74
CPNE1-219ENST00000440240 HOOK2Q96ED9 719 aa25.9■■□□□ 1.74
CPNE1-219ENST00000440240 API5Q9BZZ5 524 aaKnown RBP25.9■■□□□ 1.74
CPNE1-219ENST00000440240 NOB1Q9ULX3 412 aaKnown RBP25.9■■□□□ 1.74
CPNE1-219ENST00000440240 CSADQ9Y600 493 aa25.9■■□□□ 1.74
CPNE1-219ENST00000440240 ATG9AQ7Z3C6 839 aa25.89■■□□□ 1.74
CPNE1-219ENST00000440240 FAM83AQ86UY5 434 aa25.89■■□□□ 1.74
CPNE1-219ENST00000440240 PDE4DIPQ5VU43 2346 aa25.89■■□□□ 1.74
CPNE1-219ENST00000440240 CIAO1O76071 339 aa25.88■■□□□ 1.73
CPNE1-219ENST00000440240 APOBEC3HQ6NTF7 200 aaKnown RBP25.88■■□□□ 1.73
CPNE1-219ENST00000440240 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.88■■□□□ 1.73
CPNE1-219ENST00000440240 PTPN18Q99952 460 aa25.88■■□□□ 1.73
CPNE1-219ENST00000440240 CEP126Q9P2H0 1117 aa25.88■■□□□ 1.73
CPNE1-219ENST00000440240 ARAP2Q8WZ64 1704 aa25.88■■□□□ 1.73
CPNE1-219ENST00000440240 CRHR2Q13324 411 aa25.87■■□□□ 1.73
CPNE1-219ENST00000440240 VGLL4Q14135 290 aa25.87■■□□□ 1.73
CPNE1-219ENST00000440240 ERO1AQ96HE7 468 aa25.87■■□□□ 1.73
CPNE1-219ENST00000440240 MS4A4AQ96JQ5 239 aa25.87■■□□□ 1.73
CPNE1-219ENST00000440240 TRIM17Q9Y577 477 aa25.87■■□□□ 1.73
CPNE1-219ENST00000440240 GTF2A2P52657 109 aa25.86■■□□□ 1.73
CPNE1-219ENST00000440240 CACNB3P54284 484 aa25.86■■□□□ 1.73
CPNE1-219ENST00000440240 SIL1Q9H173 461 aa25.86■■□□□ 1.73
CPNE1-219ENST00000440240 GNL3LQ9NVN8 582 aaKnown RBP25.86■■□□□ 1.73
CPNE1-219ENST00000440240 CCER2I3L3R5 266 aa25.85■■□□□ 1.73
CPNE1-219ENST00000440240 TNRC18O15417 2968 aaPredicted RBP25.85■■□□□ 1.73
CPNE1-219ENST00000440240 IL15P40933 162 aaPredicted RBP25.84■■□□□ 1.73
CPNE1-219ENST00000440240 ATP2B3Q16720 1220 aa25.84■■□□□ 1.73
CPNE1-219ENST00000440240 OTOP1Q7RTM1 612 aa25.84■■□□□ 1.73
CPNE1-219ENST00000440240 SP3Q02447 781 aa25.83■■□□□ 1.73
CPNE1-219ENST00000440240 CNKSR2Q8WXI2 1034 aa25.83■■□□□ 1.73
CPNE1-219ENST00000440240 LRRFIP2Q9Y608 721 aaKnown RBP25.83■■□□□ 1.73
CPNE1-219ENST00000440240 LAMB1P07942 1786 aa25.82■■□□□ 1.72
CPNE1-219ENST00000440240 CCL15-CCL14A0A0B4J2E2 113 aa25.82■■□□□ 1.72
CPNE1-219ENST00000440240 CCL15Q16663 113 aa25.82■■□□□ 1.72
CPNE1-219ENST00000440240 DCAF15Q66K64 600 aa25.82■■□□□ 1.72
CPNE1-219ENST00000440240 BRI3BPQ8WY22 251 aa25.82■■□□□ 1.72
CPNE1-219ENST00000440240 ARHGAP45Q92619 1136 aa25.82■■□□□ 1.72
CPNE1-219ENST00000440240 OTUD5Q96G74 571 aa25.82■■□□□ 1.72
CPNE1-219ENST00000440240 SPDYE5A6NIY4 337 aa25.81■■□□□ 1.72
CPNE1-219ENST00000440240 SEMA3EO15041 775 aa25.81■■□□□ 1.72
CPNE1-219ENST00000440240 WDHD1O75717 1129 aaPredicted RBP25.81■■□□□ 1.72
CPNE1-219ENST00000440240 RARSP54136 660 aaKnown RBP25.81■■□□□ 1.72
CPNE1-219ENST00000440240 INTS3Q68E01 1043 aaKnown RBP25.81■■□□□ 1.72
CPNE1-219ENST00000440240 ERO1BQ86YB8 467 aa25.81■■□□□ 1.72
CPNE1-219ENST00000440240 WRNIP1Q96S55 665 aa25.81■■□□□ 1.72
CPNE1-219ENST00000440240 ZFYVE28Q9HCC9 887 aa25.81■■□□□ 1.72
CPNE1-219ENST00000440240 ARHGEF6Q15052 776 aa25.8■■□□□ 1.72
CPNE1-219ENST00000440240 CD99L2Q8TCZ2 262 aa25.8■■□□□ 1.72
CPNE1-219ENST00000440240 FAM151AQ8WW52 585 aa25.8■■□□□ 1.72
CPNE1-219ENST00000440240 EFCC1Q9HA90 598 aa25.8■■□□□ 1.72
CPNE1-219ENST00000440240 COPRSQ9NQ92 184 aa25.8■■□□□ 1.72
CPNE1-219ENST00000440240 DENND2AQ9ULE3 1009 aa25.8■■□□□ 1.72
CPNE1-219ENST00000440240 LDHBP07195 334 aaKnown RBP25.79■■□□□ 1.72
CPNE1-219ENST00000440240 TAF1CQ15572 869 aaPredicted RBP25.79■■□□□ 1.72
CPNE1-219ENST00000440240 ZNF341Q9BYN7 854 aa25.79■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms