RNA–Protein interactions for RNA: ENST00000439286.5

GARNL3-206, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-206ENST00000439286 TMOD2Q9NZR1 351 aa16.93■□□□□ 0.3
GARNL3-206ENST00000439286 HPS5Q9UPZ3 1129 aa16.93■□□□□ 0.3
GARNL3-206ENST00000439286 PSME4Q14997 1843 aa16.93■□□□□ 0.3
GARNL3-206ENST00000439286 SPEF2Q9C093 1822 aa16.93■□□□□ 0.3
GARNL3-206ENST00000439286 SLC5A1P13866 664 aa16.92■□□□□ 0.3
GARNL3-206ENST00000439286 BCAMP50895 628 aa16.92■□□□□ 0.3
GARNL3-206ENST00000439286 MAST3O60307 1309 aa16.92■□□□□ 0.3
GARNL3-206ENST00000439286 EYA2O00167 538 aa16.91■□□□□ 0.3
GARNL3-206ENST00000439286 CT47B1P0C2W7 299 aaPredicted RBP16.91■□□□□ 0.3
GARNL3-206ENST00000439286 UBTFL1P0CB47 393 aaPredicted RBP16.91■□□□□ 0.3
GARNL3-206ENST00000439286 FBXO46Q6PJ61 603 aaPredicted RBP16.91■□□□□ 0.3
GARNL3-206ENST00000439286 HOOK2Q96ED9 719 aa16.91■□□□□ 0.3
GARNL3-206ENST00000439286 CDCA7LQ96GN5 454 aa16.91■□□□□ 0.3
GARNL3-206ENST00000439286 SUGT1Q9Y2Z0 365 aa16.91■□□□□ 0.3
GARNL3-206ENST00000439286 CSADQ9Y600 493 aa16.91■□□□□ 0.3
GARNL3-206ENST00000439286 POLR2AP24928 1970 aaKnown RBP16.91■□□□□ 0.3
GARNL3-206ENST00000439286 MAP3K9P80192 1104 aa16.9■□□□□ 0.3
GARNL3-206ENST00000439286 VGLL2Q8N8G2 317 aa16.9■□□□□ 0.3
GARNL3-206ENST00000439286 LPIN2Q92539 896 aa16.9■□□□□ 0.3
GARNL3-206ENST00000439286 MRIQ9BWK5 157 aa16.9■□□□□ 0.3
GARNL3-206ENST00000439286 API5Q9BZZ5 524 aaKnown RBP16.9■□□□□ 0.3
GARNL3-206ENST00000439286 ELP3Q9H9T3 547 aa16.9■□□□□ 0.3
GARNL3-206ENST00000439286 GNL3LQ9NVN8 582 aaKnown RBP16.9■□□□□ 0.3
GARNL3-206ENST00000439286 AOX1Q06278 1338 aa16.9■□□□□ 0.3
GARNL3-206ENST00000439286 KIF16BQ96L93 1317 aa16.9■□□□□ 0.3
GARNL3-206ENST00000439286 WDR66Q8TBY9 1149 aa16.89■□□□□ 0.29
GARNL3-206ENST00000439286 OPTNQ96CV9 577 aa16.89■□□□□ 0.29
GARNL3-206ENST00000439286 TMEM39BQ9GZU3 492 aa16.89■□□□□ 0.29
GARNL3-206ENST00000439286 CEP126Q9P2H0 1117 aa16.89■□□□□ 0.29
GARNL3-206ENST00000439286 NOB1Q9ULX3 412 aaKnown RBP16.89■□□□□ 0.29
GARNL3-206ENST00000439286 WDHD1O75717 1129 aaPredicted RBP16.88■□□□□ 0.29
GARNL3-206ENST00000439286 ZDHHC15Q96MV8 337 aa16.88■□□□□ 0.29
GARNL3-206ENST00000439286 R3HDMLQ9H3Y0 253 aa16.88■□□□□ 0.29
GARNL3-206ENST00000439286 FBXO3Q9UK99 471 aa16.88■□□□□ 0.29
GARNL3-206ENST00000439286 CACNA1FO60840 1977 aa16.88■□□□□ 0.29
GARNL3-206ENST00000439286 CASP8AP2Q9UKL3 1982 aa16.88■□□□□ 0.29
GARNL3-206ENST00000439286 IGF2BP3O00425 579 aaKnown RBP eCLIP16.87■□□□□ 0.29
GARNL3-206ENST00000439286 FGFR2P21802 821 aa16.87■□□□□ 0.29
GARNL3-206ENST00000439286 GRIK5Q16478 980 aa16.87■□□□□ 0.29
GARNL3-206ENST00000439286 ERO1AQ96HE7 468 aa16.87■□□□□ 0.29
GARNL3-206ENST00000439286 TEPSINQ96N21 525 aa16.87■□□□□ 0.29
GARNL3-206ENST00000439286 SIL1Q9H173 461 aa16.87■□□□□ 0.29
GARNL3-206ENST00000439286 TRIM17Q9Y577 477 aa16.87■□□□□ 0.29
GARNL3-206ENST00000439286 SSC5DA1L4H1 1573 aa16.86■□□□□ 0.29
GARNL3-206ENST00000439286 CIAO1O76071 339 aa16.86■□□□□ 0.29
GARNL3-206ENST00000439286 RFX5P48382 616 aaPredicted RBP16.86■□□□□ 0.29
GARNL3-206ENST00000439286 GTF2A2P52657 109 aa16.86■□□□□ 0.29
GARNL3-206ENST00000439286 CACNB3P54284 484 aa16.86■□□□□ 0.29
GARNL3-206ENST00000439286 ARHGEF6Q15052 776 aa16.86■□□□□ 0.29
GARNL3-206ENST00000439286 DCAF15Q66K64 600 aa16.86■□□□□ 0.29
GARNL3-206ENST00000439286 HHIPL2Q6UWX4 724 aa16.86■□□□□ 0.29
GARNL3-206ENST00000439286 TRMT2AQ8IZ69 625 aaKnown RBP16.86■□□□□ 0.29
GARNL3-206ENST00000439286 TESPA1A2RU30 521 aaPredicted RBP16.85■□□□□ 0.29
GARNL3-206ENST00000439286 GJA5P36382 358 aa16.85■□□□□ 0.29
GARNL3-206ENST00000439286 ATP2B3Q16720 1220 aa16.85■□□□□ 0.29
GARNL3-206ENST00000439286 FKBP1CQ5VVH2 108 aa16.85■□□□□ 0.29
GARNL3-206ENST00000439286 FAM83AQ86UY5 434 aa16.85■□□□□ 0.29
GARNL3-206ENST00000439286 CCER2I3L3R5 266 aa16.84■□□□□ 0.29
GARNL3-206ENST00000439286 IL15P40933 162 aaPredicted RBP16.84■□□□□ 0.29
GARNL3-206ENST00000439286 CRHR2Q13324 411 aa16.84■□□□□ 0.29
GARNL3-206ENST00000439286 VGLL4Q14135 290 aa16.84■□□□□ 0.29
GARNL3-206ENST00000439286 APOBEC3HQ6NTF7 200 aaKnown RBP16.84■□□□□ 0.29
GARNL3-206ENST00000439286 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.84■□□□□ 0.29
GARNL3-206ENST00000439286 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.84■□□□□ 0.29
GARNL3-206ENST00000439286 ZFYVE28Q9HCC9 887 aa16.84■□□□□ 0.29
GARNL3-206ENST00000439286 CCL15-CCL14A0A0B4J2E2 113 aa16.83■□□□□ 0.28
GARNL3-206ENST00000439286 LDHBP07195 334 aaKnown RBP16.83■□□□□ 0.28
GARNL3-206ENST00000439286 SP3Q02447 781 aa16.83■□□□□ 0.28
GARNL3-206ENST00000439286 CCL15Q16663 113 aa16.83■□□□□ 0.28
GARNL3-206ENST00000439286 ATG9AQ7Z3C6 839 aa16.83■□□□□ 0.28
GARNL3-206ENST00000439286 CDAN1Q8IWY9 1227 aa16.83■□□□□ 0.28
GARNL3-206ENST00000439286 OTUD5Q96G74 571 aa16.83■□□□□ 0.28
GARNL3-206ENST00000439286 WRNIP1Q96S55 665 aa16.83■□□□□ 0.28
GARNL3-206ENST00000439286 PTPN18Q99952 460 aa16.83■□□□□ 0.28
GARNL3-206ENST00000439286 DENND2AQ9ULE3 1009 aa16.83■□□□□ 0.28
GARNL3-206ENST00000439286 LRRFIP2Q9Y608 721 aaKnown RBP16.83■□□□□ 0.28
GARNL3-206ENST00000439286 IPO8O15397 1037 aaKnown RBP16.82■□□□□ 0.28
GARNL3-206ENST00000439286 GNAI3P08754 354 aa16.82■□□□□ 0.28
GARNL3-206ENST00000439286 TAF1CQ15572 869 aaPredicted RBP16.82■□□□□ 0.28
GARNL3-206ENST00000439286 INTS3Q68E01 1043 aaKnown RBP16.82■□□□□ 0.28
GARNL3-206ENST00000439286 OTOP1Q7RTM1 612 aa16.82■□□□□ 0.28
GARNL3-206ENST00000439286 EFCC1Q9HA90 598 aa16.82■□□□□ 0.28
GARNL3-206ENST00000439286 AKAP11Q9UKA4 1901 aa16.81■□□□□ 0.28
GARNL3-206ENST00000439286 SEMA3EO15041 775 aa16.81■□□□□ 0.28
GARNL3-206ENST00000439286 CETPP11597 493 aa16.81■□□□□ 0.28
GARNL3-206ENST00000439286 ERO1BQ86YB8 467 aa16.81■□□□□ 0.28
GARNL3-206ENST00000439286 ZGPATQ8N5A5 531 aaKnown RBP16.81■□□□□ 0.28
GARNL3-206ENST00000439286 CD99L2Q8TCZ2 262 aa16.81■□□□□ 0.28
GARNL3-206ENST00000439286 FAM151AQ8WW52 585 aa16.81■□□□□ 0.28
GARNL3-206ENST00000439286 ARHGAP45Q92619 1136 aa16.81■□□□□ 0.28
GARNL3-206ENST00000439286 MS4A4AQ96JQ5 239 aa16.81■□□□□ 0.28
GARNL3-206ENST00000439286 ZNF341Q9BYN7 854 aa16.81■□□□□ 0.28
GARNL3-206ENST00000439286 ZNF646O15015 1829 aaPredicted RBP16.81■□□□□ 0.28
GARNL3-206ENST00000439286 SPDYE5A6NIY4 337 aa16.8■□□□□ 0.28
GARNL3-206ENST00000439286 RARSP54136 660 aaKnown RBP16.8■□□□□ 0.28
GARNL3-206ENST00000439286 SNAPC2Q13487 334 aa16.8■□□□□ 0.28
GARNL3-206ENST00000439286 CNKSR2Q8WXI2 1034 aa16.8■□□□□ 0.28
GARNL3-206ENST00000439286 BRI3BPQ8WY22 251 aa16.8■□□□□ 0.28
GARNL3-206ENST00000439286 ZKSCAN4Q969J2 545 aaPredicted RBP16.8■□□□□ 0.28
GARNL3-206ENST00000439286 USP40Q9NVE5 1235 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms