RNA–Protein interactions for RNA: ENST00000439122.6

HDAC8-214, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 2,338 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-214ENST00000439122 CTAGE5O15320 804 aa14.16□□□□□ -0.14
HDAC8-214ENST00000439122 FGFR2P21802 821 aa14.16□□□□□ -0.14
HDAC8-214ENST00000439122 CRKLP46109 303 aaKnown RBP14.16□□□□□ -0.14
HDAC8-214ENST00000439122 FSIP1Q8NA03 581 aa14.16□□□□□ -0.14
HDAC8-214ENST00000439122 UTP14AQ9BVJ6 771 aaKnown RBP14.16□□□□□ -0.14
HDAC8-214ENST00000439122 SEC31BQ9NQW1 1179 aa14.16□□□□□ -0.14
HDAC8-214ENST00000439122 GJB4Q9NTQ9 266 aa14.16□□□□□ -0.14
HDAC8-214ENST00000439122 PLCH1Q4KWH8 1693 aa14.16□□□□□ -0.14
HDAC8-214ENST00000439122 DOT1LQ8TEK3 1739 aa14.15□□□□□ -0.14
HDAC8-214ENST00000439122 TCRBV5S4A2TA0A5A2 114 aa14.15□□□□□ -0.14
HDAC8-214ENST00000439122 TPM3P06753 285 aa14.15□□□□□ -0.14
HDAC8-214ENST00000439122 FAM160A1Q05DH4 1040 aa14.15□□□□□ -0.14
HDAC8-214ENST00000439122 CYB5R4Q7L1T6 521 aa14.15□□□□□ -0.14
HDAC8-214ENST00000439122 NKX2-3Q8TAU0 364 aa14.15□□□□□ -0.14
HDAC8-214ENST00000439122 TRIM5Q9C035 493 aa14.15□□□□□ -0.14
HDAC8-214ENST00000439122 SLIT2O94813 1529 aa14.15□□□□□ -0.14
HDAC8-214ENST00000439122 B4E1Z4 1266 aa14.15□□□□□ -0.14
HDAC8-214ENST00000439122 PRKCSHP14314 528 aaPredicted RBP14.15□□□□□ -0.14
HDAC8-214ENST00000439122 RASGRF1Q13972 1273 aa14.15□□□□□ -0.14
HDAC8-214ENST00000439122 SF3A1Q15459 793 aaKnown RBP14.15□□□□□ -0.14
HDAC8-214ENST00000439122 DRC7Q8IY82 874 aa14.15□□□□□ -0.14
HDAC8-214ENST00000439122 MAGEB6Q8N7X4 407 aa14.15□□□□□ -0.14
HDAC8-214ENST00000439122 TDRD7Q8NHU6 1098 aaKnown RBP14.15□□□□□ -0.14
HDAC8-214ENST00000439122 STRBPQ96SI9 672 aaKnown RBP14.15□□□□□ -0.14
HDAC8-214ENST00000439122 RTEL1Q9NZ71 1219 aa14.15□□□□□ -0.14
HDAC8-214ENST00000439122 TAOK2Q9UL54 1235 aa14.15□□□□□ -0.14
HDAC8-214ENST00000439122 PCDHA7Q9UN72 937 aa14.15□□□□□ -0.14
HDAC8-214ENST00000439122 COL16A1Q07092 1604 aaPredicted RBP14.14□□□□□ -0.15
HDAC8-214ENST00000439122 UQCRHLA0A096LP55 91 aa14.14□□□□□ -0.15
HDAC8-214ENST00000439122 CAVIN2O95810 425 aa14.14□□□□□ -0.15
HDAC8-214ENST00000439122 UQCRHP07919 91 aa14.14□□□□□ -0.15
HDAC8-214ENST00000439122 RXRAP19793 462 aa14.14□□□□□ -0.15
HDAC8-214ENST00000439122 METAP2P50579 478 aaKnown RBP eCLIP14.14□□□□□ -0.15
HDAC8-214ENST00000439122 MAP3K12Q12852 859 aa14.14□□□□□ -0.15
HDAC8-214ENST00000439122 STK38Q15208 465 aa14.14□□□□□ -0.15
HDAC8-214ENST00000439122 KCNF1Q9H3M0 494 aa14.14□□□□□ -0.15
HDAC8-214ENST00000439122 CLIC4Q9Y696 253 aa14.14□□□□□ -0.15
HDAC8-214ENST00000439122 ROBO1Q9Y6N7 1651 aa14.14□□□□□ -0.15
HDAC8-214ENST00000439122 LOC102724428A0A0B4J2F2 783 aa14.14□□□□□ -0.15
HDAC8-214ENST00000439122 SIK1P57059 783 aa14.14□□□□□ -0.15
HDAC8-214ENST00000439122 ENGASEQ8NFI3 743 aa14.14□□□□□ -0.15
HDAC8-214ENST00000439122 CDCA7Q9BWT1 371 aaPredicted RBP14.14□□□□□ -0.15
HDAC8-214ENST00000439122 GOLGA6L19H0YKK7 550 aa14.13□□□□□ -0.15
HDAC8-214ENST00000439122 SH2B2O14492 632 aaPredicted RBP14.13□□□□□ -0.15
HDAC8-214ENST00000439122 MBD4O95243 580 aa14.13□□□□□ -0.15
HDAC8-214ENST00000439122 STX1AQ16623 288 aa14.13□□□□□ -0.15
HDAC8-214ENST00000439122 CCDC152Q4G0S7 254 aa14.13□□□□□ -0.15
HDAC8-214ENST00000439122 ADALQ6DHV7 355 aa14.13□□□□□ -0.15
HDAC8-214ENST00000439122 SYNE3Q6ZMZ3 975 aa14.13□□□□□ -0.15
HDAC8-214ENST00000439122 BRAPQ7Z569 592 aa14.13□□□□□ -0.15
HDAC8-214ENST00000439122 MICU3Q86XE3 530 aa14.13□□□□□ -0.15
HDAC8-214ENST00000439122 LINC00301Q8NCQ3 95 aa14.13□□□□□ -0.15
HDAC8-214ENST00000439122 MRPS27Q92552 414 aaKnown RBP14.13□□□□□ -0.15
HDAC8-214ENST00000439122 NAPBQ9H115 298 aa14.13□□□□□ -0.15
HDAC8-214ENST00000439122 NIP7Q9Y221 180 aaKnown RBP eCLIP14.13□□□□□ -0.15
HDAC8-214ENST00000439122 ZMYM6O95789 1325 aa14.13□□□□□ -0.15
HDAC8-214ENST00000439122 A0A1B0GVL5 298 aa14.13□□□□□ -0.15
HDAC8-214ENST00000439122 PTGS1P23219 599 aa14.13□□□□□ -0.15
HDAC8-214ENST00000439122 IGHMBP2P38935 993 aaKnown RBP14.13□□□□□ -0.15
HDAC8-214ENST00000439122 MYSM1Q5VVJ2 828 aa14.13□□□□□ -0.15
HDAC8-214ENST00000439122 NFXL1Q6ZNB6 911 aa14.13□□□□□ -0.15
HDAC8-214ENST00000439122 C11orf57Q6ZUT1 292 aaPredicted RBP14.13□□□□□ -0.15
HDAC8-214ENST00000439122 CCDC144CPQ8IYA2 1237 aa14.13□□□□□ -0.15
HDAC8-214ENST00000439122 KCNG4Q8TDN1 519 aa14.13□□□□□ -0.15
HDAC8-214ENST00000439122 SENP2Q9HC62 589 aa14.13□□□□□ -0.15
HDAC8-214ENST00000439122 INCENPQ9NQS7 918 aa14.13□□□□□ -0.15
HDAC8-214ENST00000439122 NEDD4P46934 1319 aa14.13□□□□□ -0.15
HDAC8-214ENST00000439122 SPATA31A1Q5TZJ5 1347 aa14.13□□□□□ -0.15
HDAC8-214ENST00000439122 DDX60Q8IY21 1712 aaKnown RBP14.12□□□□□ -0.15
HDAC8-214ENST00000439122 LRP5O75197 1615 aa14.12□□□□□ -0.15
HDAC8-214ENST00000439122 KIF28PB7ZC32 967 aa14.12□□□□□ -0.15
HDAC8-214ENST00000439122 PATL2C9JE40 543 aaKnown RBP14.12□□□□□ -0.15
HDAC8-214ENST00000439122 CAMTA2O94983 1202 aa14.12□□□□□ -0.15
HDAC8-214ENST00000439122 ZNF75DP51815 510 aa14.12□□□□□ -0.15
HDAC8-214ENST00000439122 HSP90AA2PQ14568 343 aaPredicted RBP14.12□□□□□ -0.15
HDAC8-214ENST00000439122 PARP10Q53GL7 1025 aa14.12□□□□□ -0.15
HDAC8-214ENST00000439122 APOA5Q6Q788 366 aa14.12□□□□□ -0.15
HDAC8-214ENST00000439122 IFNL3Q8IZI9 196 aa14.12□□□□□ -0.15
HDAC8-214ENST00000439122 SDF4Q9BRK5 362 aa14.12□□□□□ -0.15
HDAC8-214ENST00000439122 ARMT1Q9H993 441 aa14.12□□□□□ -0.15
HDAC8-214ENST00000439122 POLR3EQ9NVU0 708 aa14.12□□□□□ -0.15
HDAC8-214ENST00000439122 PYCARDQ9ULZ3 195 aa14.12□□□□□ -0.15
HDAC8-214ENST00000439122 A0A087WWV3 80 aa14.12□□□□□ -0.15
HDAC8-214ENST00000439122 SPTLC2O15270 562 aa14.12□□□□□ -0.15
HDAC8-214ENST00000439122 CDKL5O76039 1030 aa14.12□□□□□ -0.15
HDAC8-214ENST00000439122 BCAMP50895 628 aa14.12□□□□□ -0.15
HDAC8-214ENST00000439122 ITPK1Q13572 414 aa14.12□□□□□ -0.15
HDAC8-214ENST00000439122 CPLX2Q6PUV4 134 aaKnown RBP14.12□□□□□ -0.15
HDAC8-214ENST00000439122 PLA2G4DQ86XP0 818 aa14.12□□□□□ -0.15
HDAC8-214ENST00000439122 ERCC4Q92889 916 aaPredicted RBP14.12□□□□□ -0.15
HDAC8-214ENST00000439122 AIFM3Q96NN9 605 aa14.12□□□□□ -0.15
HDAC8-214ENST00000439122 ALG1Q9BT22 464 aa14.12□□□□□ -0.15
HDAC8-214ENST00000439122 EPB41L4AQ9HCS5 686 aaPredicted RBP14.12□□□□□ -0.15
HDAC8-214ENST00000439122 SPTLC3Q9NUV7 552 aa14.12□□□□□ -0.15
HDAC8-214ENST00000439122 WNK3Q9BYP7 1800 aa14.11□□□□□ -0.15
HDAC8-214ENST00000439122 YEATS4O95619 227 aa14.11□□□□□ -0.15
HDAC8-214ENST00000439122 NDUFA8P51970 172 aa14.11□□□□□ -0.15
HDAC8-214ENST00000439122 KIF23Q02241 960 aaPredicted RBP14.11□□□□□ -0.15
HDAC8-214ENST00000439122 CTDSPL2Q05D32 466 aa14.11□□□□□ -0.15
HDAC8-214ENST00000439122 TMEM67Q5HYA8 995 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms