RNA–Protein interactions for RNA: ENST00000439117.6

TSC2-206, Transcript of TSC complex subunit 2, humanhuman

TSL 1 (best)

Gene TSC2, Length 5,073 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-206ENST00000439117 TMEM266Q2M3C6 531 aa16.97■□□□□ 0.31
TSC2-206ENST00000439117 TRIM47Q96LD4 638 aa16.97■□□□□ 0.31
TSC2-206ENST00000439117 KAT14Q9H8E8 782 aa16.97■□□□□ 0.31
TSC2-206ENST00000439117 EFCAB6Q5THR3 1501 aa16.96■□□□□ 0.31
TSC2-206ENST00000439117 A0A1W2PRG0 241 aa16.96■□□□□ 0.31
TSC2-206ENST00000439117 SEC24BO95487 1268 aa16.96■□□□□ 0.31
TSC2-206ENST00000439117 METAP2P50579 478 aaKnown RBP eCLIP16.96■□□□□ 0.311e-7■■■■■ 29
TSC2-206ENST00000439117 PAIP2Q9BPZ3 127 aaKnown RBP16.96■□□□□ 0.31
TSC2-206ENST00000439117 PAG1Q9NWQ8 432 aa16.96■□□□□ 0.31
TSC2-206ENST00000439117 NAA16Q6N069 864 aaPredicted RBP16.96■□□□□ 0.31
TSC2-206ENST00000439117 PPFIBP2Q8ND30 876 aa16.96■□□□□ 0.31
TSC2-206ENST00000439117 BICC1Q9H694 974 aaKnown RBP16.96■□□□□ 0.31
TSC2-206ENST00000439117 CABP5Q9NP86 173 aa16.96■□□□□ 0.31
TSC2-206ENST00000439117 TCP11L1Q9NUJ3 509 aa16.96■□□□□ 0.31
TSC2-206ENST00000439117 ZSCAN26Q16670 478 aa16.96■□□□□ 0.31
TSC2-206ENST00000439117 PLEKHG1Q9ULL1 1385 aa16.96■□□□□ 0.31
TSC2-206ENST00000439117 ZBTB7BO15156 539 aaPredicted RBP16.96■□□□□ 0.3
TSC2-206ENST00000439117 DMTNQ08495 405 aa16.96■□□□□ 0.3
TSC2-206ENST00000439117 SEPT6Q14141 434 aa16.96■□□□□ 0.3
TSC2-206ENST00000439117 TNIP1Q15025 636 aa16.96■□□□□ 0.3
TSC2-206ENST00000439117 BRF1Q92994 677 aa16.96■□□□□ 0.3
TSC2-206ENST00000439117 HOMER2Q9NSB8 354 aa16.96■□□□□ 0.3
TSC2-206ENST00000439117 RASAL2Q9UJF2 1139 aa16.96■□□□□ 0.3
TSC2-206ENST00000439117 UBA7P41226 1012 aa16.95■□□□□ 0.3
TSC2-206ENST00000439117 CETN1Q12798 172 aa16.95■□□□□ 0.3
TSC2-206ENST00000439117 METTL22Q9BUU2 404 aaPredicted RBP16.95■□□□□ 0.3
TSC2-206ENST00000439117 SLC4A4Q9Y6R1 1079 aa16.95■□□□□ 0.3
TSC2-206ENST00000439117 RTL1A6NKG5 1358 aa16.95■□□□□ 0.3
TSC2-206ENST00000439117 CCDC160A6NGH7 325 aa16.95■□□□□ 0.3
TSC2-206ENST00000439117 GNPATO15228 680 aa16.95■□□□□ 0.3
TSC2-206ENST00000439117 FMNL3Q8IVF7 1028 aa16.95■□□□□ 0.3
TSC2-206ENST00000439117 LMNTD2Q8IXW0 634 aa16.95■□□□□ 0.3
TSC2-206ENST00000439117 IFT74Q96LB3 600 aa16.95■□□□□ 0.3
TSC2-206ENST00000439117 KRT23Q9C075 422 aa16.95■□□□□ 0.3
TSC2-206ENST00000439117 METP08581 1390 aa16.95■□□□□ 0.3
TSC2-206ENST00000439117 CHD1O14646 1710 aa16.95■□□□□ 0.3
TSC2-206ENST00000439117 KARSQ15046 597 aaKnown RBP16.95■□□□□ 0.3
TSC2-206ENST00000439117 PAF1Q8N7H5 531 aa16.95■□□□□ 0.3
TSC2-206ENST00000439117 HELBQ8NG08 1087 aaPredicted RBP16.95■□□□□ 0.3
TSC2-206ENST00000439117 CUL5Q93034 780 aa16.95■□□□□ 0.3
TSC2-206ENST00000439117 LZTFL1Q9NQ48 299 aa16.95■□□□□ 0.3
TSC2-206ENST00000439117 CCDC144CPQ8IYA2 1237 aa16.94■□□□□ 0.3
TSC2-206ENST00000439117 KDM5DQ9BY66 1539 aa16.94■□□□□ 0.3
TSC2-206ENST00000439117 MACROD2A1Z1Q3 448 aa16.94■□□□□ 0.3
TSC2-206ENST00000439117 TFCP2Q12800 502 aa16.94■□□□□ 0.3
TSC2-206ENST00000439117 ZNF804AQ7Z570 1209 aa16.94■□□□□ 0.3
TSC2-206ENST00000439117 MAP3K9P80192 1104 aa16.94■□□□□ 0.3
TSC2-206ENST00000439117 ZMYM4Q5VZL5 1548 aa16.94■□□□□ 0.3
TSC2-206ENST00000439117 ESR2Q92731 530 aa16.94■□□□□ 0.3
TSC2-206ENST00000439117 PRPHP41219 470 aa16.93■□□□□ 0.3
TSC2-206ENST00000439117 PARP10Q53GL7 1025 aa16.93■□□□□ 0.3
TSC2-206ENST00000439117 ATL3Q6DD88 541 aa16.93■□□□□ 0.3
TSC2-206ENST00000439117 BAG1Q99933 345 aaPredicted RBP16.93■□□□□ 0.3
TSC2-206ENST00000439117 CNNM2Q9H8M5 875 aa16.93■□□□□ 0.3
TSC2-206ENST00000439117 WTAPQ15007 396 aa16.93■□□□□ 0.3
TSC2-206ENST00000439117 TRAPPC3LQ5T215 181 aa16.93■□□□□ 0.3
TSC2-206ENST00000439117 CNGA4Q8IV77 575 aa16.93■□□□□ 0.3
TSC2-206ENST00000439117 SMC6Q96SB8 1091 aa16.93■□□□□ 0.3
TSC2-206ENST00000439117 STX8Q9UNK0 236 aa16.93■□□□□ 0.3
TSC2-206ENST00000439117 NSFL1CQ9UNZ2 370 aaKnown RBP16.93■□□□□ 0.3
TSC2-206ENST00000439117 SPATA31E1Q6ZUB1 1445 aa16.93■□□□□ 0.3
TSC2-206ENST00000439117 KLF18A0A0U1RQI7 1052 aa16.93■□□□□ 0.3
TSC2-206ENST00000439117 CCDC172P0C7W6 258 aa16.93■□□□□ 0.3
TSC2-206ENST00000439117 NMIQ13287 307 aaPredicted RBP16.93■□□□□ 0.3
TSC2-206ENST00000439117 RRAGBQ5VZM2 374 aa16.93■□□□□ 0.3
TSC2-206ENST00000439117 CALML4Q96GE6 196 aa16.93■□□□□ 0.3
TSC2-206ENST00000439117 ZCCHC11Q5TAX3 1644 aaKnown RBP16.93■□□□□ 0.3
TSC2-206ENST00000439117 SETDB1Q15047 1291 aa16.93■□□□□ 0.3
TSC2-206ENST00000439117 TMTC2Q8N394 836 aa16.93■□□□□ 0.3
TSC2-206ENST00000439117 FAM89AQ96GI7 184 aa16.93■□□□□ 0.3
TSC2-206ENST00000439117 ZC3H12CQ9C0D7 883 aaKnown RBP16.93■□□□□ 0.3
TSC2-206ENST00000439117 LRRC27Q9C0I9 530 aa16.93■□□□□ 0.3
TSC2-206ENST00000439117 CHMP4BP1P59074 171 aa16.92■□□□□ 0.3
TSC2-206ENST00000439117 SLC4A8Q2Y0W8 1093 aa16.92■□□□□ 0.3
TSC2-206ENST00000439117 CCNL1Q9UK58 526 aaPredicted RBP16.92■□□□□ 0.3
TSC2-206ENST00000439117 SPTLC2O15270 562 aa16.92■□□□□ 0.3
TSC2-206ENST00000439117 OAS2P29728 719 aaKnown RBP16.92■□□□□ 0.3
TSC2-206ENST00000439117 TTLL12Q14166 644 aaPredicted RBP16.92■□□□□ 0.3
TSC2-206ENST00000439117 RAB11FIP4Q86YS3 637 aa16.92■□□□□ 0.3
TSC2-206ENST00000439117 CARD6Q9BX69 1037 aa16.92■□□□□ 0.3
TSC2-206ENST00000439117 PARP3Q9Y6F1 533 aa16.92■□□□□ 0.3
TSC2-206ENST00000439117 PLEKHM2Q8IWE5 1019 aa16.92■□□□□ 0.3
TSC2-206ENST00000439117 CCDC42Q96M95 316 aa16.92■□□□□ 0.3
TSC2-206ENST00000439117 ANKRD2Q9GZV1 360 aa16.92■□□□□ 0.3
TSC2-206ENST00000439117 LUC7L2Q9Y383 392 aaKnown RBP16.92■□□□□ 0.3
TSC2-206ENST00000439117 IKBKGQ9Y6K9 419 aa16.92■□□□□ 0.3
TSC2-206ENST00000439117 KDM2BQ8NHM5 1336 aa16.92■□□□□ 0.3
TSC2-206ENST00000439117 SH3TC1Q8TE82 1336 aa16.92■□□□□ 0.3
TSC2-206ENST00000439117 WDHD1O75717 1129 aaPredicted RBP16.92■□□□□ 0.3
TSC2-206ENST00000439117 SLC26A6Q9BXS9 759 aa16.92■□□□□ 0.3
TSC2-206ENST00000439117 IMPACTQ9P2X3 320 aa16.92■□□□□ 0.3
TSC2-206ENST00000439117 GUCA1BQ9UMX6 200 aa16.92■□□□□ 0.3
TSC2-206ENST00000439117 PREX2Q70Z35 1606 aa16.91■□□□□ 0.3
TSC2-206ENST00000439117 GOLGA6CA6NDK9 693 aa16.91■□□□□ 0.3
TSC2-206ENST00000439117 GOLGA6DP0CG33 693 aa16.91■□□□□ 0.3
TSC2-206ENST00000439117 GOLGA6AQ9NYA3 693 aa16.91■□□□□ 0.3
TSC2-206ENST00000439117 RNF113AO15541 343 aaKnown RBP16.91■□□□□ 0.3
TSC2-206ENST00000439117 A1BGP04217 495 aa16.91■□□□□ 0.3
TSC2-206ENST00000439117 SETSIPP0DME0 302 aa16.91■□□□□ 0.3
TSC2-206ENST00000439117 LMBR1Q8WVP7 490 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms