RNA–Protein interactions for RNA: ENST00000438862.6

CSTF3-203, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 1 (best) BASIC

Gene CSTF3, Length 1,132 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-203ENST00000438862 HOXB7P09629 217 aa14.47□□□□□ -0.09
CSTF3-203ENST00000438862 CCT4P50991 539 aaKnown RBP14.47□□□□□ -0.09
CSTF3-203ENST00000438862 TAF1CQ15572 869 aaPredicted RBP14.47□□□□□ -0.09
CSTF3-203ENST00000438862 HDGFL1Q5TGJ6 251 aa14.47□□□□□ -0.09
CSTF3-203ENST00000438862 MS4A4AQ96JQ5 239 aa14.47□□□□□ -0.09
CSTF3-203ENST00000438862 KRTAP3-3Q9BYR6 98 aa14.47□□□□□ -0.09
CSTF3-203ENST00000438862 KRTAP3-2Q9BYR7 98 aa14.47□□□□□ -0.09
CSTF3-203ENST00000438862 BSDC1Q9NW68 430 aaPredicted RBP14.47□□□□□ -0.09
CSTF3-203ENST00000438862 MINPP1Q9UNW1 487 aa14.47□□□□□ -0.09
CSTF3-203ENST00000438862 ZNF804BA4D1E1 1349 aa14.46□□□□□ -0.09
CSTF3-203ENST00000438862 LMOD3Q0VAK6 560 aa14.46□□□□□ -0.09
CSTF3-203ENST00000438862 RIC3Q7Z5B4 369 aa14.46□□□□□ -0.09
CSTF3-203ENST00000438862 EFCAB3Q8N7B9 438 aa14.46□□□□□ -0.09
CSTF3-203ENST00000438862 CCDC191Q8NCU4 936 aa14.46□□□□□ -0.09
CSTF3-203ENST00000438862 LEMD3Q9Y2U8 911 aa14.46□□□□□ -0.09
CSTF3-203ENST00000438862 SSC5DA1L4H1 1573 aa14.46□□□□□ -0.09
CSTF3-203ENST00000438862 FAM205CA6NFA0 338 aa14.45□□□□□ -0.1
CSTF3-203ENST00000438862 GTF2A2P52657 109 aa14.45□□□□□ -0.1
CSTF3-203ENST00000438862 NBPF12Q5TAG4 269 aaPredicted RBP14.45□□□□□ -0.1
CSTF3-203ENST00000438862 GPR153Q6NV75 609 aa14.45□□□□□ -0.1
CSTF3-203ENST00000438862 OPTNQ96CV9 577 aa14.45□□□□□ -0.1
CSTF3-203ENST00000438862 SHISA4Q96DD7 197 aa14.45□□□□□ -0.1
CSTF3-203ENST00000438862 CCDC85AQ96PX6 553 aaPredicted RBP14.45□□□□□ -0.1
CSTF3-203ENST00000438862 ECM29Q5VYK3 1845 aa14.45□□□□□ -0.1
CSTF3-203ENST00000438862 CCL15-CCL14A0A0B4J2E2 113 aa14.44□□□□□ -0.1
CSTF3-203ENST00000438862 CHL1O00533 1208 aa14.44□□□□□ -0.1
CSTF3-203ENST00000438862 ZBTB7BO15156 539 aaPredicted RBP14.44□□□□□ -0.1
CSTF3-203ENST00000438862 GTF2IP78347 998 aa14.44□□□□□ -0.1
CSTF3-203ENST00000438862 CCL15Q16663 113 aa14.44□□□□□ -0.1
CSTF3-203ENST00000438862 UBE2Q1Q7Z7E8 422 aa14.44□□□□□ -0.1
CSTF3-203ENST00000438862 BRI3BPQ8WY22 251 aa14.44□□□□□ -0.1
CSTF3-203ENST00000438862 ELP3Q9H9T3 547 aa14.44□□□□□ -0.1
CSTF3-203ENST00000438862 TLR2O60603 784 aa14.43□□□□□ -0.1
CSTF3-203ENST00000438862 GJA8P48165 433 aa14.43□□□□□ -0.1
CSTF3-203ENST00000438862 LACTBP83111 547 aaPredicted RBP14.43□□□□□ -0.1
CSTF3-203ENST00000438862 KRT24Q2M2I5 525 aa14.43□□□□□ -0.1
CSTF3-203ENST00000438862 TXNRD3Q86VQ6 643 aa14.43□□□□□ -0.1
CSTF3-203ENST00000438862 ZCCHC17Q9NP64 241 aaKnown RBP14.43□□□□□ -0.1
CSTF3-203ENST00000438862 SOX1O00570 391 aaPredicted RBP14.42□□□□□ -0.1
CSTF3-203ENST00000438862 GJB1P08034 283 aa14.42□□□□□ -0.1
CSTF3-203ENST00000438862 MTFR1Q15390 333 aa14.42□□□□□ -0.1
CSTF3-203ENST00000438862 HELBQ8NG08 1087 aaPredicted RBP14.42□□□□□ -0.1
CSTF3-203ENST00000438862 LRCH3Q96II8 777 aa14.42□□□□□ -0.1
CSTF3-203ENST00000438862 CWC25Q9NXE8 425 aaPredicted RBP14.42□□□□□ -0.1
CSTF3-203ENST00000438862 CAPN2P17655 700 aa14.41□□□□□ -0.1
CSTF3-203ENST00000438862 HOXD10P28358 340 aa14.41□□□□□ -0.1
CSTF3-203ENST00000438862 RASA3Q14644 834 aa14.41□□□□□ -0.1
CSTF3-203ENST00000438862 FAM43AQ8N2R8 423 aa14.41□□□□□ -0.1
CSTF3-203ENST00000438862 MYD88Q99836 296 aa14.41□□□□□ -0.1
CSTF3-203ENST00000438862 ARHGAP39Q9C0H5 1083 aa14.41□□□□□ -0.1
CSTF3-203ENST00000438862 ANKRD2Q9GZV1 360 aa14.41□□□□□ -0.1
CSTF3-203ENST00000438862 VEZTQ9HBM0 779 aa14.41□□□□□ -0.1
CSTF3-203ENST00000438862 CLRN2A0PK11 232 aa14.4□□□□□ -0.1
CSTF3-203ENST00000438862 TMPOP42166 694 aaKnown RBP14.4□□□□□ -0.1
CSTF3-203ENST00000438862 CTSWP56202 376 aa14.4□□□□□ -0.1
CSTF3-203ENST00000438862 TNFAIP1Q13829 316 aa14.4□□□□□ -0.1
CSTF3-203ENST00000438862 CFAP100Q494V2 611 aa14.4□□□□□ -0.1
CSTF3-203ENST00000438862 TTLL11Q8NHH1 800 aa14.4□□□□□ -0.1
CSTF3-203ENST00000438862 RNF25Q96BH1 459 aaPredicted RBP14.4□□□□□ -0.1
CSTF3-203ENST00000438862 PRMT6Q96LA8 375 aaPredicted RBP14.4□□□□□ -0.1
CSTF3-203ENST00000438862 STXBP5LQ9Y2K9 1186 aa14.4□□□□□ -0.1
CSTF3-203ENST00000438862 EVI5O60447 810 aa14.39□□□□□ -0.11
CSTF3-203ENST00000438862 GRK4P32298 578 aa14.39□□□□□ -0.11
CSTF3-203ENST00000438862 MAP3K9P80192 1104 aa14.39□□□□□ -0.11
CSTF3-203ENST00000438862 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.39□□□□□ -0.11
CSTF3-203ENST00000438862 JARID2Q92833 1246 aaPredicted RBP14.39□□□□□ -0.11
CSTF3-203ENST00000438862 TRIM47Q96LD4 638 aa14.39□□□□□ -0.11
CSTF3-203ENST00000438862 CD209Q9NNX6 404 aa14.39□□□□□ -0.11
CSTF3-203ENST00000438862 SRRDQ9UH36 339 aa14.39□□□□□ -0.11
CSTF3-203ENST00000438862 CETPP11597 493 aa14.38□□□□□ -0.11
CSTF3-203ENST00000438862 CCL5P13501 91 aa14.38□□□□□ -0.11
CSTF3-203ENST00000438862 IGHMBP2P38935 993 aaKnown RBP14.38□□□□□ -0.11
CSTF3-203ENST00000438862 FKBP1AP62942 108 aaKnown RBP14.38□□□□□ -0.11
CSTF3-203ENST00000438862 UBXN2AP68543 259 aa14.38□□□□□ -0.11
CSTF3-203ENST00000438862 CERS5Q8N5B7 392 aa14.38□□□□□ -0.11
CSTF3-203ENST00000438862 RAET1EQ8TD07 263 aa14.38□□□□□ -0.11
CSTF3-203ENST00000438862 COL25A1Q9BXS0 654 aaPredicted RBP14.38□□□□□ -0.11
CSTF3-203ENST00000438862 RNF208Q9H0X6 261 aa14.38□□□□□ -0.11
CSTF3-203ENST00000438862 LAS1LQ9Y4W2 734 aaKnown RBP14.38□□□□□ -0.11
CSTF3-203ENST00000438862 PCDHAC2Q9Y5I4 1007 aa14.38□□□□□ -0.11
CSTF3-203ENST00000438862 CSADQ9Y600 493 aa14.38□□□□□ -0.11
CSTF3-203ENST00000438862 OTOFQ9HC10 1997 aa14.38□□□□□ -0.11
CSTF3-203ENST00000438862 FARP2O94887 1054 aaPredicted RBP14.37□□□□□ -0.11
CSTF3-203ENST00000438862 BMP8BP34820 402 aa14.37□□□□□ -0.11
CSTF3-203ENST00000438862 DEFB123Q8N688 67 aa14.37□□□□□ -0.11
CSTF3-203ENST00000438862 METTL22Q9BUU2 404 aaPredicted RBP14.37□□□□□ -0.11
CSTF3-203ENST00000438862 GREM2Q9H772 168 aa14.37□□□□□ -0.11
CSTF3-203ENST00000438862 STAP2Q9UGK3 403 aa14.37□□□□□ -0.11
CSTF3-203ENST00000438862 RIPOR2Q9Y4F9 1068 aa14.37□□□□□ -0.11
CSTF3-203ENST00000438862 MYH3P11055 1940 aa14.37□□□□□ -0.11
CSTF3-203ENST00000438862 SPEF2Q9C093 1822 aa14.36□□□□□ -0.11
CSTF3-203ENST00000438862 F8W031 263 aaPredicted RBP14.36□□□□□ -0.11
CSTF3-203ENST00000438862 PSMC4P43686 418 aa14.36□□□□□ -0.11
CSTF3-203ENST00000438862 KCNJ4P48050 445 aa14.36□□□□□ -0.11
CSTF3-203ENST00000438862 RBM5P52756 815 aaKnown RBP eCLIP14.36□□□□□ -0.11
CSTF3-203ENST00000438862 VGLL4Q14135 290 aa14.36□□□□□ -0.11
CSTF3-203ENST00000438862 DUSP27Q5VZP5 1158 aa14.36□□□□□ -0.11
CSTF3-203ENST00000438862 C17orf99Q6UX52 265 aa14.36□□□□□ -0.11
CSTF3-203ENST00000438862 U2AF1L4Q8WU68 220 aaKnown RBP14.36□□□□□ -0.11
CSTF3-203ENST00000438862 PHAXQ9H814 394 aaKnown RBP14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms