RNA–Protein interactions for RNA: ENST00000438508.1

HMGN1P6-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 6, humanhuman

BASIC

Gene HMGN1P6, Length 291 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P6-201ENST00000438508 EFHC2Q5JST6 749 aa9.02□□□□□ -0.97
HMGN1P6-201ENST00000438508 DDX17Q92841 729 aaKnown RBP9.02□□□□□ -0.97
HMGN1P6-201ENST00000438508 TNNQ9UQP3 1299 aa9.02□□□□□ -0.97
HMGN1P6-201ENST00000438508 RBM19Q9Y4C8 960 aaKnown RBP9.02□□□□□ -0.97
HMGN1P6-201ENST00000438508 IGHDP01880 384 aa9.01□□□□□ -0.97
HMGN1P6-201ENST00000438508 ADH6P28332 368 aa9.01□□□□□ -0.97
HMGN1P6-201ENST00000438508 CLK2P49760 499 aaKnown RBP9.01□□□□□ -0.97
HMGN1P6-201ENST00000438508 ZC3H6P61129 1189 aaKnown RBP9.01□□□□□ -0.97
HMGN1P6-201ENST00000438508 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.01□□□□□ -0.97
HMGN1P6-201ENST00000438508 PNMA1Q8ND90 353 aa9.01□□□□□ -0.97
HMGN1P6-201ENST00000438508 LRRC59Q96AG4 307 aaKnown RBP9.01□□□□□ -0.97
HMGN1P6-201ENST00000438508 CHMP4AQ9BY43 222 aa9.01□□□□□ -0.97
HMGN1P6-201ENST00000438508 API5Q9BZZ5 524 aaKnown RBP9.01□□□□□ -0.97
HMGN1P6-201ENST00000438508 ZBTB40Q9NUA8 1239 aa9.01□□□□□ -0.97
HMGN1P6-201ENST00000438508 NHSL1Q5SYE7 1610 aa9.01□□□□□ -0.97
HMGN1P6-201ENST00000438508 ADAMTS7Q9UKP4 1686 aa9□□□□□ -0.97
HMGN1P6-201ENST00000438508 OVOS2A0A0G2JMS6 1433 aa9□□□□□ -0.97
HMGN1P6-201ENST00000438508 ELL2O00472 640 aaPredicted RBP9□□□□□ -0.97
HMGN1P6-201ENST00000438508 ZBTB7BO15156 539 aaPredicted RBP9□□□□□ -0.97
HMGN1P6-201ENST00000438508 PAX4O43316 350 aa9□□□□□ -0.97
HMGN1P6-201ENST00000438508 APBA3O96018 575 aa9□□□□□ -0.97
HMGN1P6-201ENST00000438508 FTSJ3Q8IY81 847 aaKnown RBP9□□□□□ -0.97
HMGN1P6-201ENST00000438508 USHBP1Q8N6Y0 703 aa9□□□□□ -0.97
HMGN1P6-201ENST00000438508 CRISPLD1Q9H336 500 aa9□□□□□ -0.97
HMGN1P6-201ENST00000438508 RWDD1Q9H446 243 aaPredicted RBP9□□□□□ -0.97
HMGN1P6-201ENST00000438508 KLF15Q9UIH9 416 aa9□□□□□ -0.97
HMGN1P6-201ENST00000438508 TSPYL4Q9UJ04 414 aa9□□□□□ -0.97
HMGN1P6-201ENST00000438508 PTPRCP08575 1304 aa9□□□□□ -0.97
HMGN1P6-201ENST00000438508 RNMTO43148 476 aaKnown RBP8.99□□□□□ -0.97
HMGN1P6-201ENST00000438508 TRAK2O60296 914 aa8.99□□□□□ -0.97
HMGN1P6-201ENST00000438508 HOXB7P09629 217 aa8.99□□□□□ -0.97
HMGN1P6-201ENST00000438508 HDAC1Q13547 482 aaPredicted RBP8.99□□□□□ -0.97
HMGN1P6-201ENST00000438508 PRRT3Q5FWE3 981 aa8.99□□□□□ -0.97
HMGN1P6-201ENST00000438508 FAM182BQ5T319 152 aa8.99□□□□□ -0.97
HMGN1P6-201ENST00000438508 INTS3Q68E01 1043 aaKnown RBP8.99□□□□□ -0.97
HMGN1P6-201ENST00000438508 TMEM57Q8N5G2 664 aa8.99□□□□□ -0.97
HMGN1P6-201ENST00000438508 LGR6Q9HBX8 967 aa8.99□□□□□ -0.97
HMGN1P6-201ENST00000438508 ABCC4O15439 1325 aa8.99□□□□□ -0.97
HMGN1P6-201ENST00000438508 FCHSD1Q86WN1 690 aa8.98□□□□□ -0.97
HMGN1P6-201ENST00000438508 ESYT1Q9BSJ8 1104 aa8.98□□□□□ -0.97
HMGN1P6-201ENST00000438508 RUBCNLQ9H714 662 aa8.98□□□□□ -0.97
HMGN1P6-201ENST00000438508 MIS18AQ9NYP9 233 aa8.98□□□□□ -0.97
HMGN1P6-201ENST00000438508 SIPA1L3O60292 1781 aaPredicted RBP8.98□□□□□ -0.97
HMGN1P6-201ENST00000438508 KDM3BQ7LBC6 1761 aa8.98□□□□□ -0.97
HMGN1P6-201ENST00000438508 SCN11AQ9UI33 1791 aa8.98□□□□□ -0.97
HMGN1P6-201ENST00000438508 ZBTB7CA1YPR0 619 aa8.97□□□□□ -0.97
HMGN1P6-201ENST00000438508 GIGYF1O75420 1035 aaPredicted RBP8.97□□□□□ -0.97
HMGN1P6-201ENST00000438508 MSX1P28360 303 aa8.97□□□□□ -0.97
HMGN1P6-201ENST00000438508 EIF4A1P60842 406 aaKnown RBP8.97□□□□□ -0.97
HMGN1P6-201ENST00000438508 KRT24Q2M2I5 525 aa8.97□□□□□ -0.97
HMGN1P6-201ENST00000438508 CCDC30Q5VVM6 783 aa8.97□□□□□ -0.97
HMGN1P6-201ENST00000438508 ZNF530Q6P9A1 599 aaPredicted RBP8.97□□□□□ -0.97
HMGN1P6-201ENST00000438508 NACC1Q96RE7 527 aa8.97□□□□□ -0.97
HMGN1P6-201ENST00000438508 LTBP4Q8N2S1 1624 aa8.97□□□□□ -0.97
HMGN1P6-201ENST00000438508 HEG1Q9ULI3 1381 aa8.97□□□□□ -0.97
HMGN1P6-201ENST00000438508 ARID1BQ8NFD5 2236 aaPredicted RBP8.96□□□□□ -0.97
HMGN1P6-201ENST00000438508 TRIM66O15016 1216 aa8.96□□□□□ -0.98
HMGN1P6-201ENST00000438508 TATP17735 454 aaPredicted RBP8.96□□□□□ -0.98
HMGN1P6-201ENST00000438508 CENPCQ03188 943 aa8.96□□□□□ -0.98
HMGN1P6-201ENST00000438508 C1orf141Q5JVX7 400 aa8.96□□□□□ -0.98
HMGN1P6-201ENST00000438508 FIGNL1Q6PIW4 674 aa8.96□□□□□ -0.98
HMGN1P6-201ENST00000438508 ITPRIPQ8IWB1 547 aa8.96□□□□□ -0.98
HMGN1P6-201ENST00000438508 SMC5Q8IY18 1101 aa8.96□□□□□ -0.98
HMGN1P6-201ENST00000438508 RAPGEF4Q8WZA2 1011 aa8.96□□□□□ -0.98
HMGN1P6-201ENST00000438508 BACH2Q9BYV9 841 aa8.96□□□□□ -0.98
HMGN1P6-201ENST00000438508 ARHGEF10LQ9HCE6 1279 aa8.96□□□□□ -0.98
HMGN1P6-201ENST00000438508 NLRP2Q9NX02 1062 aa8.96□□□□□ -0.98
HMGN1P6-201ENST00000438508 SPG7Q9UQ90 795 aa8.96□□□□□ -0.98
HMGN1P6-201ENST00000438508 HRH3Q9Y5N1 445 aa8.96□□□□□ -0.98
HMGN1P6-201ENST00000438508 PKD1L3Q7Z443 1732 aa8.95□□□□□ -0.98
HMGN1P6-201ENST00000438508 ABCA3Q99758 1704 aa8.95□□□□□ -0.98
HMGN1P6-201ENST00000438508 IFNL2Q8IZJ0 200 aa8.95□□□□□ -0.98
HMGN1P6-201ENST00000438508 KRTAP4-2Q9BYR5 136 aa8.95□□□□□ -0.98
HMGN1P6-201ENST00000438508 WDR17Q8IZU2 1322 aa8.95□□□□□ -0.98
HMGN1P6-201ENST00000438508 HSP90AB1P08238 724 aaKnown RBP8.94□□□□□ -0.98
HMGN1P6-201ENST00000438508 PHKG2P15735 406 aa8.94□□□□□ -0.98
HMGN1P6-201ENST00000438508 PHKA2P46019 1235 aa8.94□□□□□ -0.98
HMGN1P6-201ENST00000438508 TEFQ10587 303 aa8.94□□□□□ -0.98
HMGN1P6-201ENST00000438508 CHRNA2Q15822 529 aa8.94□□□□□ -0.98
HMGN1P6-201ENST00000438508 MPRIPQ6WCQ1 1025 aa8.94□□□□□ -0.98
HMGN1P6-201ENST00000438508 CARD10Q9BWT7 1032 aa8.94□□□□□ -0.98
HMGN1P6-201ENST00000438508 STK31Q9BXU1 1019 aa8.94□□□□□ -0.98
HMGN1P6-201ENST00000438508 OSBPL3Q9H4L5 887 aa8.94□□□□□ -0.98
HMGN1P6-201ENST00000438508 PCDHGC4Q9Y5F7 938 aa8.94□□□□□ -0.98
HMGN1P6-201ENST00000438508 RGS12O14924 1447 aa8.94□□□□□ -0.98
HMGN1P6-201ENST00000438508 AHDC1Q5TGY3 1603 aaPredicted RBP8.94□□□□□ -0.98
HMGN1P6-201ENST00000438508 GNRH1P01148 92 aa8.93□□□□□ -0.98
HMGN1P6-201ENST00000438508 RNF20Q5VTR2 975 aa8.93□□□□□ -0.98
HMGN1P6-201ENST00000438508 RPAP2Q8IXW5 612 aaPredicted RBP8.93□□□□□ -0.98
HMGN1P6-201ENST00000438508 CNKSR1Q969H4 720 aa8.93□□□□□ -0.98
HMGN1P6-201ENST00000438508 PRDM11Q9NQV5 511 aa8.93□□□□□ -0.98
HMGN1P6-201ENST00000438508 DNAAF2Q9NVR5 837 aaKnown RBP8.93□□□□□ -0.98
HMGN1P6-201ENST00000438508 N4BP2Q86UW6 1770 aaPredicted RBP8.92□□□□□ -0.98
HMGN1P6-201ENST00000438508 COL22A1Q8NFW1 1626 aaPredicted RBP8.92□□□□□ -0.98
HMGN1P6-201ENST00000438508 CCT4P50991 539 aaKnown RBP8.92□□□□□ -0.98
HMGN1P6-201ENST00000438508 G2E3Q7L622 706 aa8.92□□□□□ -0.98
HMGN1P6-201ENST00000438508 GCC1Q96CN9 775 aa8.92□□□□□ -0.98
HMGN1P6-201ENST00000438508 ZSCAN10Q96SZ4 725 aaPredicted RBP8.92□□□□□ -0.98
HMGN1P6-201ENST00000438508 SLC52A2Q9HAB3 445 aa8.92□□□□□ -0.98
HMGN1P6-201ENST00000438508 ROBO1Q9Y6N7 1651 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms