RNA–Protein interactions for RNA: ENST00000438014.5

R3HDM1-208, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-208ENST00000438014 LAPTM4BQ86VI4 370 aa10.94□□□□□ -0.66
R3HDM1-208ENST00000438014 PNISRQ8TF01 805 aaKnown RBP10.94□□□□□ -0.66
R3HDM1-208ENST00000438014 TSC1Q92574 1164 aa10.94□□□□□ -0.66
R3HDM1-208ENST00000438014 EYA3Q99504 573 aa10.94□□□□□ -0.66
R3HDM1-208ENST00000438014 CFHR5Q9BXR6 569 aa10.94□□□□□ -0.66
R3HDM1-208ENST00000438014 DBNDD1Q9H9R9 158 aa10.94□□□□□ -0.66
R3HDM1-208ENST00000438014 SIPA1L3O60292 1781 aaPredicted RBP10.94□□□□□ -0.66
R3HDM1-208ENST00000438014 POM121CA8CG34 1229 aa10.93□□□□□ -0.66
R3HDM1-208ENST00000438014 C6orf229H3BNL8 230 aa10.93□□□□□ -0.66
R3HDM1-208ENST00000438014 ALDH1A1P00352 501 aa10.93□□□□□ -0.66
R3HDM1-208ENST00000438014 CC2D1BQ5T0F9 858 aaKnown RBP10.93□□□□□ -0.66
R3HDM1-208ENST00000438014 NECTIN2Q92692 538 aa10.93□□□□□ -0.66
R3HDM1-208ENST00000438014 GLMNQ92990 594 aa10.93□□□□□ -0.66
R3HDM1-208ENST00000438014 NBPF3Q9H094 633 aa10.93□□□□□ -0.66
R3HDM1-208ENST00000438014 NSFL1CQ9UNZ2 370 aaKnown RBP10.93□□□□□ -0.66
R3HDM1-208ENST00000438014 NUDCQ9Y266 331 aa10.93□□□□□ -0.66
R3HDM1-208ENST00000438014 UBE2Q2LH0YL09 131 aa10.92□□□□□ -0.66
R3HDM1-208ENST00000438014 ECE2O60344 883 aa10.92□□□□□ -0.66
R3HDM1-208ENST00000438014 RNF40O75150 1001 aa10.92□□□□□ -0.66
R3HDM1-208ENST00000438014 VIL1P09327 827 aaKnown RBP10.92□□□□□ -0.66
R3HDM1-208ENST00000438014 SCARF1Q14162 830 aa10.92□□□□□ -0.66
R3HDM1-208ENST00000438014 ANGEL2Q5VTE6 544 aaKnown RBP10.92□□□□□ -0.66
R3HDM1-208ENST00000438014 CFAP53Q96M91 514 aa10.92□□□□□ -0.66
R3HDM1-208ENST00000438014 HMX1Q9NP08 348 aaPredicted RBP10.92□□□□□ -0.66
R3HDM1-208ENST00000438014 MIS18AQ9NYP9 233 aa10.92□□□□□ -0.66
R3HDM1-208ENST00000438014 ERBB4Q15303 1308 aa10.91□□□□□ -0.66
R3HDM1-208ENST00000438014 HCLS1P14317 486 aaPredicted RBP10.91□□□□□ -0.66
R3HDM1-208ENST00000438014 NF2P35240 595 aa10.91□□□□□ -0.66
R3HDM1-208ENST00000438014 TCIRG1Q13488 830 aa10.91□□□□□ -0.66
R3HDM1-208ENST00000438014 DCTN1Q14203 1278 aa10.91□□□□□ -0.66
R3HDM1-208ENST00000438014 HSP90AB3PQ58FF7 597 aa10.91□□□□□ -0.66
R3HDM1-208ENST00000438014 SLC17A8Q8NDX2 589 aa10.91□□□□□ -0.66
R3HDM1-208ENST00000438014 ZC3H12CQ9C0D7 883 aaKnown RBP10.91□□□□□ -0.66
R3HDM1-208ENST00000438014 TRIM17Q9Y577 477 aa10.91□□□□□ -0.66
R3HDM1-208ENST00000438014 PITPNM2Q9BZ72 1349 aa10.9□□□□□ -0.66
R3HDM1-208ENST00000438014 CFAP99D6REC4 459 aa10.9□□□□□ -0.66
R3HDM1-208ENST00000438014 INHBEP58166 350 aa10.9□□□□□ -0.66
R3HDM1-208ENST00000438014 ZNF280AP59817 542 aaPredicted RBP10.9□□□□□ -0.66
R3HDM1-208ENST00000438014 IRF5Q13568 498 aa10.9□□□□□ -0.66
R3HDM1-208ENST00000438014 AGBL3Q8NEM8 1001 aa10.9□□□□□ -0.66
R3HDM1-208ENST00000438014 TRIM34Q9BYJ4 488 aa10.9□□□□□ -0.66
R3HDM1-208ENST00000438014 KCNQ5Q9NR82 932 aa10.9□□□□□ -0.66
R3HDM1-208ENST00000438014 TRMT112Q9UI30 125 aaKnown RBP10.9□□□□□ -0.66
R3HDM1-208ENST00000438014 ASTN2O75129 1339 aaPredicted RBP10.89□□□□□ -0.67
R3HDM1-208ENST00000438014 SH3TC1Q8TE82 1336 aa10.89□□□□□ -0.67
R3HDM1-208ENST00000438014 PER1O15534 1290 aaPredicted RBP10.89□□□□□ -0.67
R3HDM1-208ENST00000438014 EMP3P54852 163 aa10.89□□□□□ -0.67
R3HDM1-208ENST00000438014 EIF4A1P60842 406 aaKnown RBP10.89□□□□□ -0.67
R3HDM1-208ENST00000438014 KMT5BQ4FZB7 885 aa10.89□□□□□ -0.67
R3HDM1-208ENST00000438014 MOB2Q70IA6 237 aa10.89□□□□□ -0.67
R3HDM1-208ENST00000438014 OTOP1Q7RTM1 612 aa10.89□□□□□ -0.67
R3HDM1-208ENST00000438014 LRRN4Q8WUT4 740 aa10.89□□□□□ -0.67
R3HDM1-208ENST00000438014 POLLQ9UGP5 575 aa10.89□□□□□ -0.67
R3HDM1-208ENST00000438014 RTL9Q8NET4 1388 aa10.89□□□□□ -0.67
R3HDM1-208ENST00000438014 POLR2AP24928 1970 aaKnown RBP10.88□□□□□ -0.67
R3HDM1-208ENST00000438014 U2AF1L5P0DN76 240 aaPredicted RBP10.88□□□□□ -0.67
R3HDM1-208ENST00000438014 EN2P19622 333 aaPredicted RBP10.88□□□□□ -0.67
R3HDM1-208ENST00000438014 U2AF1Q01081 240 aaKnown RBP eCLIP10.88□□□□□ -0.67
R3HDM1-208ENST00000438014 ARMC9Q7Z3E5 817 aa10.88□□□□□ -0.67
R3HDM1-208ENST00000438014 NLRP10Q86W26 655 aa10.88□□□□□ -0.67
R3HDM1-208ENST00000438014 ZNF687Q8N1G0 1237 aa10.88□□□□□ -0.67
R3HDM1-208ENST00000438014 ARMC5Q96C12 935 aa10.88□□□□□ -0.67
R3HDM1-208ENST00000438014 ERO1AQ96HE7 468 aa10.88□□□□□ -0.67
R3HDM1-208ENST00000438014 R3HDMLQ9H3Y0 253 aa10.88□□□□□ -0.67
R3HDM1-208ENST00000438014 PTPN22Q9Y2R2 807 aa10.88□□□□□ -0.67
R3HDM1-208ENST00000438014 NUP98P52948 1817 aa10.88□□□□□ -0.67
R3HDM1-208ENST00000438014 COL3A1P02461 1466 aaPredicted RBP10.87□□□□□ -0.67
R3HDM1-208ENST00000438014 NEFMP07197 916 aa10.87□□□□□ -0.67
R3HDM1-208ENST00000438014 GPSM2P81274 684 aa10.87□□□□□ -0.67
R3HDM1-208ENST00000438014 TBC1D16Q8TBP0 767 aa10.87□□□□□ -0.67
R3HDM1-208ENST00000438014 ZFRQ96KR1 1074 aaKnown RBP10.87□□□□□ -0.67
R3HDM1-208ENST00000438014 MYOZ2Q9NPC6 264 aa10.87□□□□□ -0.67
R3HDM1-208ENST00000438014 PAPPA2Q9BXP8 1791 aa10.86□□□□□ -0.67
R3HDM1-208ENST00000438014 MANSC4A6NHS7 340 aaPredicted RBP10.86□□□□□ -0.67
R3HDM1-208ENST00000438014 SF3B3Q15393 1217 aaKnown RBP10.86□□□□□ -0.67
R3HDM1-208ENST00000438014 HDGFL1Q5TGJ6 251 aa10.86□□□□□ -0.67
R3HDM1-208ENST00000438014 TRAIPQ9BWF2 469 aa10.86□□□□□ -0.67
R3HDM1-208ENST00000438014 BHMG1C9JSJ3 638 aaPredicted RBP10.85□□□□□ -0.67
R3HDM1-208ENST00000438014 ST18O60284 1047 aa10.85□□□□□ -0.67
R3HDM1-208ENST00000438014 RPS8P62241 208 aaKnown RBP10.85□□□□□ -0.67
R3HDM1-208ENST00000438014 PTPN12Q05209 780 aaKnown RBP10.85□□□□□ -0.67
R3HDM1-208ENST00000438014 ARHGEF6Q15052 776 aa10.85□□□□□ -0.67
R3HDM1-208ENST00000438014 PRAMEF18Q5VWM3 479 aa10.85□□□□□ -0.67
R3HDM1-208ENST00000438014 SPRYD7Q5W111 196 aa10.85□□□□□ -0.67
R3HDM1-208ENST00000438014 OTUD7BQ6GQQ9 843 aa10.85□□□□□ -0.67
R3HDM1-208ENST00000438014 NBPF11Q86T75 865 aa10.85□□□□□ -0.67
R3HDM1-208ENST00000438014 PRR7Q8TB68 274 aa10.85□□□□□ -0.67
R3HDM1-208ENST00000438014 SYMPKQ92797 1274 aaKnown RBP10.85□□□□□ -0.67
R3HDM1-208ENST00000438014 CELF1Q92879 486 aaKnown RBP10.85□□□□□ -0.67
R3HDM1-208ENST00000438014 THUMPD2Q9BTF0 503 aaKnown RBP10.85□□□□□ -0.67
R3HDM1-208ENST00000438014 EFCC1Q9HA90 598 aa10.85□□□□□ -0.67
R3HDM1-208ENST00000438014 H0YGN5 161 aa10.84□□□□□ -0.67
R3HDM1-208ENST00000438014 TK2O00142 265 aa10.84□□□□□ -0.67
R3HDM1-208ENST00000438014 GPR37L1O60883 481 aa10.84□□□□□ -0.67
R3HDM1-208ENST00000438014 EIF2S2P20042 333 aaKnown RBP10.84□□□□□ -0.67
R3HDM1-208ENST00000438014 CNGB1Q14028 1251 aaPredicted RBP10.84□□□□□ -0.67
R3HDM1-208ENST00000438014 MRPL50Q8N5N7 158 aaKnown RBP10.84□□□□□ -0.67
R3HDM1-208ENST00000438014 SLC10A4Q96EP9 437 aa10.84□□□□□ -0.67
R3HDM1-208ENST00000438014 GMLQ99445 158 aa10.84□□□□□ -0.67
R3HDM1-208ENST00000438014 USP17L3A6NCW0 530 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms