RNA–Protein interactions for RNA: ENST00000437425.6

SGCE-205, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-205ENST00000437425 MBD4O95243 580 aa18.18■□□□□ 0.5
SGCE-205ENST00000437425 CYP7A1P22680 504 aa18.18■□□□□ 0.5
SGCE-205ENST00000437425 CCDC83Q8IWF9 413 aa18.18■□□□□ 0.5
SGCE-205ENST00000437425 LLPHQ9BRT6 129 aaKnown RBP18.18■□□□□ 0.5
SGCE-205ENST00000437425 NAPBQ9H115 298 aa18.18■□□□□ 0.5
SGCE-205ENST00000437425 NPR1P16066 1061 aa18.17■□□□□ 0.5
SGCE-205ENST00000437425 ALDH1B1P30837 517 aa18.17■□□□□ 0.5
SGCE-205ENST00000437425 NAA16Q6N069 864 aaPredicted RBP18.17■□□□□ 0.5
SGCE-205ENST00000437425 ZNF274Q96GC6 653 aaPredicted RBP18.17■□□□□ 0.5
SGCE-205ENST00000437425 CNNM2Q9H8M5 875 aa18.17■□□□□ 0.5
SGCE-205ENST00000437425 GGA1Q9UJY5 639 aa18.17■□□□□ 0.5
SGCE-205ENST00000437425 KIF3AQ9Y496 699 aa18.17■□□□□ 0.5
SGCE-205ENST00000437425 MAGEB6P1A0A0J9YX57 407 aa18.16■□□□□ 0.5
SGCE-205ENST00000437425 EVCP57679 992 aa18.16■□□□□ 0.5
SGCE-205ENST00000437425 TTLL5Q6EMB2 1281 aa18.16■□□□□ 0.5
SGCE-205ENST00000437425 GIMAP6Q6P9H5 292 aa18.16■□□□□ 0.5
SGCE-205ENST00000437425 CERS3Q8IU89 383 aa18.16■□□□□ 0.5
SGCE-205ENST00000437425 SP8Q8IXZ3 490 aa18.16■□□□□ 0.5
SGCE-205ENST00000437425 IFNL3Q8IZI9 196 aa18.16■□□□□ 0.5
SGCE-205ENST00000437425 GTF3C6Q969F1 213 aa18.16■□□□□ 0.5
SGCE-205ENST00000437425 MYO5AQ9Y4I1 1855 aaKnown RBP18.16■□□□□ 0.5
SGCE-205ENST00000437425 COL1A1P02452 1464 aaPredicted RBP18.15■□□□□ 0.5
SGCE-205ENST00000437425 LAMA4Q16363 1823 aa18.15■□□□□ 0.5
SGCE-205ENST00000437425 LARGE1O95461 756 aa18.15■□□□□ 0.5
SGCE-205ENST00000437425 GJB2P29033 226 aa18.15■□□□□ 0.5
SGCE-205ENST00000437425 MTA3Q9BTC8 594 aa18.15■□□□□ 0.5
SGCE-205ENST00000437425 TMX4Q9H1E5 349 aaPredicted RBP18.15■□□□□ 0.5
SGCE-205ENST00000437425 ZDHHC9Q9Y397 364 aa18.15■□□□□ 0.5
SGCE-205ENST00000437425 MYH13Q9UKX3 1938 aa18.15■□□□□ 0.5
SGCE-205ENST00000437425 STX6O43752 255 aa18.14■□□□□ 0.49
SGCE-205ENST00000437425 TRAK2O60296 914 aa18.14■□□□□ 0.49
SGCE-205ENST00000437425 PFKFB2O60825 505 aa18.14■□□□□ 0.49
SGCE-205ENST00000437425 MB21D2Q8IYB1 491 aaPredicted RBP18.14■□□□□ 0.49
SGCE-205ENST00000437425 TDRD7Q8NHU6 1098 aaKnown RBP18.14■□□□□ 0.49
SGCE-205ENST00000437425 BRF1Q92994 677 aa18.14■□□□□ 0.49
SGCE-205ENST00000437425 RNF41Q9H4P4 317 aaPredicted RBP18.14■□□□□ 0.49
SGCE-205ENST00000437425 ARMT1Q9H993 441 aa18.14■□□□□ 0.49
SGCE-205ENST00000437425 STK32BQ9NY57 414 aa18.14■□□□□ 0.49
SGCE-205ENST00000437425 IQSEC3Q9UPP2 1182 aaPredicted RBP18.14■□□□□ 0.49
SGCE-205ENST00000437425 SLC4A4Q9Y6R1 1079 aa18.14■□□□□ 0.49
SGCE-205ENST00000437425 EP400Q96L91 3159 aa18.14■□□□□ 0.49
SGCE-205ENST00000437425 QSER1Q2KHR3 1735 aa18.14■□□□□ 0.49
SGCE-205ENST00000437425 GSG1L2A8MUP6 293 aa18.13■□□□□ 0.49
SGCE-205ENST00000437425 DHX16O60231 1041 aaKnown RBP18.13■□□□□ 0.49
SGCE-205ENST00000437425 PCP11498 1178 aaKnown RBP18.13■□□□□ 0.49
SGCE-205ENST00000437425 NT5C2P49902 561 aa18.13■□□□□ 0.49
SGCE-205ENST00000437425 GSTO1P78417 241 aa18.13■□□□□ 0.49
SGCE-205ENST00000437425 HMGN5P82970 282 aaKnown RBP18.13■□□□□ 0.49
SGCE-205ENST00000437425 PKP1Q13835 747 aa18.13■□□□□ 0.49
SGCE-205ENST00000437425 GSE1Q14687 1217 aa18.13■□□□□ 0.49
SGCE-205ENST00000437425 TMEM87BQ96K49 555 aa18.13■□□□□ 0.49
SGCE-205ENST00000437425 TCEANC2Q96MN5 208 aa18.13■□□□□ 0.49
SGCE-205ENST00000437425 LARP6Q9BRS8 491 aaKnown RBP18.13■□□□□ 0.49
SGCE-205ENST00000437425 KRT23Q9C075 422 aa18.13■□□□□ 0.49
SGCE-205ENST00000437425 NSFL1CQ9UNZ2 370 aaKnown RBP18.13■□□□□ 0.49
SGCE-205ENST00000437425 MAST2Q6P0Q8 1798 aa18.13■□□□□ 0.49
SGCE-205ENST00000437425 PPEF1O14829 653 aaPredicted RBP18.13■□□□□ 0.49
SGCE-205ENST00000437425 UFL1O94874 794 aa18.13■□□□□ 0.49
SGCE-205ENST00000437425 MMP10P09238 476 aa18.13■□□□□ 0.49
SGCE-205ENST00000437425 ZSCAN22P10073 491 aaPredicted RBP18.13■□□□□ 0.49
SGCE-205ENST00000437425 SRGNP10124 158 aa18.13■□□□□ 0.49
SGCE-205ENST00000437425 SYT1P21579 422 aa18.13■□□□□ 0.49
SGCE-205ENST00000437425 TDO2P48775 406 aa18.13■□□□□ 0.49
SGCE-205ENST00000437425 HAND2P61296 217 aa18.13■□□□□ 0.49
SGCE-205ENST00000437425 GPSM2P81274 684 aa18.13■□□□□ 0.49
SGCE-205ENST00000437425 SF3B2Q13435 895 aaKnown RBP18.13■□□□□ 0.49
SGCE-205ENST00000437425 SLC15A2Q16348 729 aa18.13■□□□□ 0.49
SGCE-205ENST00000437425 NSUN4Q96CB9 384 aaKnown RBP18.13■□□□□ 0.49
SGCE-205ENST00000437425 CAMKK2Q96RR4 588 aa18.13■□□□□ 0.49
SGCE-205ENST00000437425 ATP6V0A2Q9Y487 856 aa18.13■□□□□ 0.49
SGCE-205ENST00000437425 LRRC37AA6NMS7 1700 aa18.12■□□□□ 0.49
SGCE-205ENST00000437425 PRC1O43663 620 aa18.12■□□□□ 0.49
SGCE-205ENST00000437425 KLRK1P26718 216 aa18.12■□□□□ 0.49
SGCE-205ENST00000437425 LCORLQ8N3X6 602 aa18.12■□□□□ 0.49
SGCE-205ENST00000437425 NECAB1Q8N987 351 aa18.12■□□□□ 0.49
SGCE-205ENST00000437425 MASTLQ96GX5 879 aa18.12■□□□□ 0.49
SGCE-205ENST00000437425 CACNA1SQ13698 1873 aa18.11■□□□□ 0.49
SGCE-205ENST00000437425 TIAM2Q8IVF5 1701 aa18.11■□□□□ 0.49
SGCE-205ENST00000437425 WTIPA6NIX2 430 aaPredicted RBP18.11■□□□□ 0.49
SGCE-205ENST00000437425 LDHCP07864 332 aa18.11■□□□□ 0.49
SGCE-205ENST00000437425 IL1R1P14778 569 aa18.11■□□□□ 0.49
SGCE-205ENST00000437425 STAG1Q8WVM7 1258 aa18.11■□□□□ 0.49
SGCE-205ENST00000437425 RIOK1Q9BRS2 568 aaKnown RBP18.11■□□□□ 0.49
SGCE-205ENST00000437425 ANAPC4Q9UJX5 808 aa18.11■□□□□ 0.49
SGCE-205ENST00000437425 LDHBP07195 334 aaKnown RBP18.1■□□□□ 0.49
SGCE-205ENST00000437425 BAG6P46379 1132 aa18.1■□□□□ 0.49
SGCE-205ENST00000437425 MECOMQ03112 1051 aa18.1■□□□□ 0.49
SGCE-205ENST00000437425 ST3GAL1Q11201 340 aa18.1■□□□□ 0.49
SGCE-205ENST00000437425 CSPP1Q1MSJ5 1256 aa18.1■□□□□ 0.49
SGCE-205ENST00000437425 AKNAD1Q5T1N1 836 aa18.1■□□□□ 0.49
SGCE-205ENST00000437425 LARP1BQ659C4 914 aaKnown RBP18.1■□□□□ 0.49
SGCE-205ENST00000437425 MCTP1Q6DN14 999 aa18.1■□□□□ 0.49
SGCE-205ENST00000437425 MFSD6Q6ZSS7 791 aa18.1■□□□□ 0.49
SGCE-205ENST00000437425 DZIP1Q86YF9 867 aaKnown RBP18.1■□□□□ 0.49
SGCE-205ENST00000437425 TBC1D22AQ8WUA7 517 aa18.1■□□□□ 0.49
SGCE-205ENST00000437425 CRNKL1Q9BZJ0 848 aaKnown RBP18.1■□□□□ 0.49
SGCE-205ENST00000437425 EPB41L4AQ9HCS5 686 aaPredicted RBP18.1■□□□□ 0.49
SGCE-205ENST00000437425 KIAA1551Q9HCM1 1747 aa18.09■□□□□ 0.49
SGCE-205ENST00000437425 CHAF1AQ13111 956 aaPredicted RBP18.09■□□□□ 0.49
SGCE-205ENST00000437425 TXNRD3Q86VQ6 643 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms