RNA–Protein interactions for RNA: ENST00000436412.1

NIF3L1-208, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 3

Gene NIF3L1, Length 479 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-208ENST00000436412 NPC1L1Q9UHC9 1359 aa11.2□□□□□ -0.62
NIF3L1-208ENST00000436412 HOXA10P31260 410 aaPredicted RBP11.2□□□□□ -0.62
NIF3L1-208ENST00000436412 EPS15P42566 896 aa11.2□□□□□ -0.62
NIF3L1-208ENST00000436412 PIP4K2AP48426 406 aaPredicted RBP11.2□□□□□ -0.62
NIF3L1-208ENST00000436412 CTDSPL2Q05D32 466 aa11.2□□□□□ -0.62
NIF3L1-208ENST00000436412 NBPF10Q6P3W6 841 aaKnown RBP11.2□□□□□ -0.62
NIF3L1-208ENST00000436412 LARGE2Q8N3Y3 721 aa11.2□□□□□ -0.62
NIF3L1-208ENST00000436412 NBPF15Q8N660 670 aa11.2□□□□□ -0.62
NIF3L1-208ENST00000436412 FAM174AQ8TBP5 190 aa11.2□□□□□ -0.62
NIF3L1-208ENST00000436412 VPS33BQ9H267 617 aa11.2□□□□□ -0.62
NIF3L1-208ENST00000436412 CASP8AP2Q9UKL3 1982 aa11.19□□□□□ -0.62
NIF3L1-208ENST00000436412 COL3A1P02461 1466 aaPredicted RBP11.19□□□□□ -0.62
NIF3L1-208ENST00000436412 KIF7Q2M1P5 1343 aa11.19□□□□□ -0.62
NIF3L1-208ENST00000436412 FAM177BA6PVY3 158 aa11.19□□□□□ -0.62
NIF3L1-208ENST00000436412 ERVV-1B6SEH8 477 aa11.19□□□□□ -0.62
NIF3L1-208ENST00000436412 CAPN5O15484 640 aaPredicted RBP11.19□□□□□ -0.62
NIF3L1-208ENST00000436412 GRM1Q13255 1194 aa11.19□□□□□ -0.62
NIF3L1-208ENST00000436412 NNTQ13423 1086 aa11.19□□□□□ -0.62
NIF3L1-208ENST00000436412 CC2D1BQ5T0F9 858 aaKnown RBP11.19□□□□□ -0.62
NIF3L1-208ENST00000436412 SH3RF1Q7Z6J0 888 aa11.19□□□□□ -0.62
NIF3L1-208ENST00000436412 SAPCD2Q86UD0 394 aa11.19□□□□□ -0.62
NIF3L1-208ENST00000436412 RTF1Q92541 710 aaKnown RBP11.19□□□□□ -0.62
NIF3L1-208ENST00000436412 RPGRQ92834 1020 aaKnown RBP11.19□□□□□ -0.62
NIF3L1-208ENST00000436412 DDRGK1Q96HY6 314 aa11.19□□□□□ -0.62
NIF3L1-208ENST00000436412 KLF16Q9BXK1 252 aaPredicted RBP11.19□□□□□ -0.62
NIF3L1-208ENST00000436412 SENP2Q9HC62 589 aa11.19□□□□□ -0.62
NIF3L1-208ENST00000436412 ADARB2Q9NS39 739 aaKnown RBP11.19□□□□□ -0.62
NIF3L1-208ENST00000436412 RIC1Q4ADV7 1423 aa11.18□□□□□ -0.62
NIF3L1-208ENST00000436412 PRAMEF22A3QJZ6 481 aa11.18□□□□□ -0.62
NIF3L1-208ENST00000436412 HTATSF1O43719 755 aaKnown RBP11.18□□□□□ -0.62
NIF3L1-208ENST00000436412 BMP1P13497 986 aa11.18□□□□□ -0.62
NIF3L1-208ENST00000436412 BRPF1P55201 1214 aaPredicted RBP11.18□□□□□ -0.62
NIF3L1-208ENST00000436412 HLFQ16534 295 aa11.18□□□□□ -0.62
NIF3L1-208ENST00000436412 NIM1KQ8IY84 436 aa11.18□□□□□ -0.62
NIF3L1-208ENST00000436412 RBM17Q96I25 401 aaKnown RBP11.18□□□□□ -0.62
NIF3L1-208ENST00000436412 PHACTR3Q96KR7 559 aa11.18□□□□□ -0.62
NIF3L1-208ENST00000436412 CRAMP1Q96RY5 1269 aa11.18□□□□□ -0.62
NIF3L1-208ENST00000436412 MCOLN1Q9GZU1 580 aa11.18□□□□□ -0.62
NIF3L1-208ENST00000436412 TMX4Q9H1E5 349 aaPredicted RBP11.18□□□□□ -0.62
NIF3L1-208ENST00000436412 LTBP1Q14766 1721 aa11.18□□□□□ -0.62
NIF3L1-208ENST00000436412 IBTKQ9P2D0 1353 aaPredicted RBP11.17□□□□□ -0.62
NIF3L1-208ENST00000436412 TRAF5O00463 557 aa11.17□□□□□ -0.62
NIF3L1-208ENST00000436412 AOC2O75106 756 aa11.17□□□□□ -0.62
NIF3L1-208ENST00000436412 ADH1CP00326 375 aa11.17□□□□□ -0.62
NIF3L1-208ENST00000436412 PRKAR2BP31323 418 aa11.17□□□□□ -0.62
NIF3L1-208ENST00000436412 FMR1Q06787 632 aaKnown RBP eCLIP11.17□□□□□ -0.62
NIF3L1-208ENST00000436412 PPP2R2DQ66LE6 453 aa11.17□□□□□ -0.62
NIF3L1-208ENST00000436412 SH3BP5LQ7L8J4 393 aa11.17□□□□□ -0.62
NIF3L1-208ENST00000436412 C1QTNF2Q9BXJ5 285 aa11.17□□□□□ -0.62
NIF3L1-208ENST00000436412 GPRC5DQ9NZD1 345 aa11.17□□□□□ -0.62
NIF3L1-208ENST00000436412 PGAP2Q9UHJ9 254 aa11.17□□□□□ -0.62
NIF3L1-208ENST00000436412 CDHR2Q9BYE9 1310 aa11.16□□□□□ -0.62
NIF3L1-208ENST00000436412 CELF2O95319 508 aaKnown RBP11.16□□□□□ -0.62
NIF3L1-208ENST00000436412 NFX1Q12986 1120 aaKnown RBP11.16□□□□□ -0.62
NIF3L1-208ENST00000436412 CFAP53Q96M91 514 aa11.16□□□□□ -0.62
NIF3L1-208ENST00000436412 NUDCQ9Y266 331 aa11.16□□□□□ -0.62
NIF3L1-208ENST00000436412 COL4A5P29400 1685 aa11.16□□□□□ -0.62
NIF3L1-208ENST00000436412 ABCC12Q96J65 1359 aa11.16□□□□□ -0.62
NIF3L1-208ENST00000436412 PPIP5K2O43314 1243 aa11.15□□□□□ -0.62
NIF3L1-208ENST00000436412 TIMP2P16035 220 aa11.15□□□□□ -0.62
NIF3L1-208ENST00000436412 GRM5P41594 1212 aa11.15□□□□□ -0.62
NIF3L1-208ENST00000436412 NOGQ13253 232 aa11.15□□□□□ -0.62
NIF3L1-208ENST00000436412 TAF7Q15545 349 aaPredicted RBP11.15□□□□□ -0.62
NIF3L1-208ENST00000436412 BPHLQ86WA6 291 aaPredicted RBP11.15□□□□□ -0.62
NIF3L1-208ENST00000436412 SUPT20HQ8NEM7 779 aa11.15□□□□□ -0.62
NIF3L1-208ENST00000436412 ARMC2Q8NEN0 867 aa11.15□□□□□ -0.62
NIF3L1-208ENST00000436412 LRRN4Q8WUT4 740 aa11.15□□□□□ -0.62
NIF3L1-208ENST00000436412 KIFC2Q96AC6 838 aa11.15□□□□□ -0.62
NIF3L1-208ENST00000436412 ZNRF3Q9ULT6 936 aa11.15□□□□□ -0.62
NIF3L1-208ENST00000436412 NUP98P52948 1817 aa11.14□□□□□ -0.63
NIF3L1-208ENST00000436412 MAP3K15Q6ZN16 1313 aa11.14□□□□□ -0.63
NIF3L1-208ENST00000436412 DGKZQ13574 1117 aa11.14□□□□□ -0.63
NIF3L1-208ENST00000436412 LCE2CQ5TA81 110 aa11.14□□□□□ -0.63
NIF3L1-208ENST00000436412 KIF6Q6ZMV9 814 aa11.14□□□□□ -0.63
NIF3L1-208ENST00000436412 CDC37L1Q7L3B6 337 aa11.14□□□□□ -0.63
NIF3L1-208ENST00000436412 MCM10Q7L590 875 aa11.14□□□□□ -0.63
NIF3L1-208ENST00000436412 RTFDC1Q9BY42 306 aaPredicted RBP11.14□□□□□ -0.63
NIF3L1-208ENST00000436412 ATP6V0A2Q9Y487 856 aa11.14□□□□□ -0.63
NIF3L1-208ENST00000436412 NR3C2P08235 984 aa11.13□□□□□ -0.63
NIF3L1-208ENST00000436412 GMPSP49915 693 aaPredicted RBP11.13□□□□□ -0.63
NIF3L1-208ENST00000436412 CXCL9Q07325 125 aa11.13□□□□□ -0.63
NIF3L1-208ENST00000436412 TNIP1Q15025 636 aa11.13□□□□□ -0.63
NIF3L1-208ENST00000436412 AOC3Q16853 763 aa11.13□□□□□ -0.63
NIF3L1-208ENST00000436412 CIAPIN1Q6FI81 312 aa11.13□□□□□ -0.63
NIF3L1-208ENST00000436412 PNISRQ8TF01 805 aaKnown RBP11.13□□□□□ -0.63
NIF3L1-208ENST00000436412 GLIS2Q9BZE0 524 aaPredicted RBP11.13□□□□□ -0.63
NIF3L1-208ENST00000436412 BBOX1O75936 387 aa11.12□□□□□ -0.63
NIF3L1-208ENST00000436412 AGERQ15109 404 aa11.12□□□□□ -0.63
NIF3L1-208ENST00000436412 PARP10Q53GL7 1025 aa11.12□□□□□ -0.63
NIF3L1-208ENST00000436412 PPP1R42Q7Z4L9 355 aa11.12□□□□□ -0.63
NIF3L1-208ENST00000436412 ZNF34Q8IZ26 560 aa11.12□□□□□ -0.63
NIF3L1-208ENST00000436412 NLRP3Q96P20 1036 aa11.12□□□□□ -0.63
NIF3L1-208ENST00000436412 PCGF6Q9BYE7 350 aa11.12□□□□□ -0.63
NIF3L1-208ENST00000436412 UBN2Q6ZU65 1347 aa11.11□□□□□ -0.63
NIF3L1-208ENST00000436412 NTSR2O95665 410 aa11.11□□□□□ -0.63
NIF3L1-208ENST00000436412 U2AF1L5P0DN76 240 aaPredicted RBP11.11□□□□□ -0.63
NIF3L1-208ENST00000436412 GPTP24298 496 aa11.11□□□□□ -0.63
NIF3L1-208ENST00000436412 WDR4P57081 412 aaKnown RBP11.11□□□□□ -0.63
NIF3L1-208ENST00000436412 U2AF1Q01081 240 aaKnown RBP eCLIP11.11□□□□□ -0.63
NIF3L1-208ENST00000436412 KIAA2012Q0VF49 1180 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms