RNA–Protein interactions for RNA: ENST00000433762.1

COL6A3-207, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL6A3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-207ENST00000433762 CACTINQ8WUQ7 758 aaKnown RBP15.9■□□□□ 0.14
COL6A3-207ENST00000433762 TMEM87BQ96K49 555 aa15.9■□□□□ 0.14
COL6A3-207ENST00000433762 OSBPL5Q9H0X9 879 aaPredicted RBP15.9■□□□□ 0.14
COL6A3-207ENST00000433762 KIF2AO00139 706 aaPredicted RBP15.9■□□□□ 0.14
COL6A3-207ENST00000433762 CPLX1O14810 134 aa15.9■□□□□ 0.14
COL6A3-207ENST00000433762 SPTLC2O15270 562 aa15.9■□□□□ 0.14
COL6A3-207ENST00000433762 UQCRFS1P1P0C7P4 283 aa15.9■□□□□ 0.14
COL6A3-207ENST00000433762 CMA1P23946 247 aa15.9■□□□□ 0.14
COL6A3-207ENST00000433762 ZAP70P43403 619 aa15.9■□□□□ 0.14
COL6A3-207ENST00000433762 CEBPZQ03701 1054 aaKnown RBP15.9■□□□□ 0.14
COL6A3-207ENST00000433762 TRDNQ13061 729 aa15.9■□□□□ 0.14
COL6A3-207ENST00000433762 BCL2L12Q9HB09 334 aa15.9■□□□□ 0.14
COL6A3-207ENST00000433762 KIAA1468Q9P260 1216 aa15.9■□□□□ 0.14
COL6A3-207ENST00000433762 NID2Q14112 1375 aa15.89■□□□□ 0.14
COL6A3-207ENST00000433762 A0A0G2JLW4 131 aa15.89■□□□□ 0.13
COL6A3-207ENST00000433762 FAM237AA0A1B0GTK4 181 aa15.89■□□□□ 0.13
COL6A3-207ENST00000433762 ARID4AP29374 1257 aaPredicted RBP15.89■□□□□ 0.13
COL6A3-207ENST00000433762 VGLL2Q8N8G2 317 aa15.89■□□□□ 0.13
COL6A3-207ENST00000433762 ANGEL1Q9UNK9 670 aaKnown RBP15.89■□□□□ 0.13
COL6A3-207ENST00000433762 CCDC9Q9Y3X0 531 aaKnown RBP15.89■□□□□ 0.13
COL6A3-207ENST00000433762 MYO1BO43795 1136 aa15.89■□□□□ 0.13
COL6A3-207ENST00000433762 PIP4K2BP78356 416 aa15.89■□□□□ 0.13
COL6A3-207ENST00000433762 KIF23Q02241 960 aaPredicted RBP15.89■□□□□ 0.13
COL6A3-207ENST00000433762 CPLX2Q6PUV4 134 aaKnown RBP15.89■□□□□ 0.13
COL6A3-207ENST00000433762 SMAP1Q8IYB5 467 aaPredicted RBP15.89■□□□□ 0.13
COL6A3-207ENST00000433762 FTOQ9C0B1 505 aaKnown RBP eCLIP15.89■□□□□ 0.13
COL6A3-207ENST00000433762 PUS7LQ9H0K6 701 aaKnown RBP15.89■□□□□ 0.13
COL6A3-207ENST00000433762 NRBP1Q9UHY1 535 aa15.89■□□□□ 0.13
COL6A3-207ENST00000433762 ANKRD18BA2A2Z9 1011 aa15.88■□□□□ 0.13
COL6A3-207ENST00000433762 UBAP1LF5GYI3 381 aa15.88■□□□□ 0.13
COL6A3-207ENST00000433762 PPP6R2O75170 966 aa15.88■□□□□ 0.13
COL6A3-207ENST00000433762 TUBB4AP04350 444 aa15.88■□□□□ 0.13
COL6A3-207ENST00000433762 TPM4P67936 248 aa15.88■□□□□ 0.13
COL6A3-207ENST00000433762 SF3A1Q15459 793 aaKnown RBP15.88■□□□□ 0.13
COL6A3-207ENST00000433762 SYNE3Q6ZMZ3 975 aa15.88■□□□□ 0.13
COL6A3-207ENST00000433762 ELOA2Q8IYF1 753 aaPredicted RBP15.88■□□□□ 0.13
COL6A3-207ENST00000433762 JMYQ8N9B5 988 aa15.88■□□□□ 0.13
COL6A3-207ENST00000433762 TTLL11Q8NHH1 800 aa15.88■□□□□ 0.13
COL6A3-207ENST00000433762 SDF4Q9BRK5 362 aa15.88■□□□□ 0.13
COL6A3-207ENST00000433762 MTA3Q9BTC8 594 aa15.88■□□□□ 0.13
COL6A3-207ENST00000433762 NAP1L2Q9ULW6 460 aaPredicted RBP15.88■□□□□ 0.13
COL6A3-207ENST00000433762 NEDD4P46934 1319 aa15.87■□□□□ 0.13
COL6A3-207ENST00000433762 STK36Q9NRP7 1315 aa15.87■□□□□ 0.13
COL6A3-207ENST00000433762 ERVV-1B6SEH8 477 aa15.87■□□□□ 0.13
COL6A3-207ENST00000433762 CTSWP56202 376 aa15.87■□□□□ 0.13
COL6A3-207ENST00000433762 LRMPQ12912 555 aa15.87■□□□□ 0.13
COL6A3-207ENST00000433762 CCDC144BQ3MJ40 725 aa15.87■□□□□ 0.13
COL6A3-207ENST00000433762 METTL24Q5JXM2 366 aa15.87■□□□□ 0.13
COL6A3-207ENST00000433762 ANO1Q5XXA6 986 aa15.87■□□□□ 0.13
COL6A3-207ENST00000433762 NLRP10Q86W26 655 aa15.87■□□□□ 0.13
COL6A3-207ENST00000433762 CCDC144CPQ8IYA2 1237 aa15.87■□□□□ 0.13
COL6A3-207ENST00000433762 COL22A1Q8NFW1 1626 aaPredicted RBP15.87■□□□□ 0.13
COL6A3-207ENST00000433762 CICQ96RK0 1608 aaPredicted RBP15.87■□□□□ 0.13
COL6A3-207ENST00000433762 SCARF1Q14162 830 aa15.87■□□□□ 0.13
COL6A3-207ENST00000433762 ZRSR1Q15695 479 aaKnown RBP15.87■□□□□ 0.13
COL6A3-207ENST00000433762 MYO5AQ9Y4I1 1855 aaKnown RBP15.87■□□□□ 0.13
COL6A3-207ENST00000433762 WNK3Q9BYP7 1800 aa15.87■□□□□ 0.13
COL6A3-207ENST00000433762 DISP2A7MBM2 1401 aa15.87■□□□□ 0.13
COL6A3-207ENST00000433762 SH2B2O14492 632 aaPredicted RBP15.86■□□□□ 0.13
COL6A3-207ENST00000433762 IKBKBO14920 756 aa15.86■□□□□ 0.13
COL6A3-207ENST00000433762 TNNT1P13805 278 aa15.86■□□□□ 0.13
COL6A3-207ENST00000433762 MCAMP43121 646 aa15.86■□□□□ 0.13
COL6A3-207ENST00000433762 NLRP12P59046 1061 aa15.86■□□□□ 0.13
COL6A3-207ENST00000433762 SLC39A14Q15043 492 aa15.86■□□□□ 0.13
COL6A3-207ENST00000433762 SGMS1Q86VZ5 419 aa15.86■□□□□ 0.13
COL6A3-207ENST00000433762 AHDC1Q5TGY3 1603 aaPredicted RBP15.86■□□□□ 0.13
COL6A3-207ENST00000433762 LAMB2P55268 1798 aa15.86■□□□□ 0.13
COL6A3-207ENST00000433762 NDUFA8P51970 172 aa15.86■□□□□ 0.13
COL6A3-207ENST00000433762 AXDND1Q5T1B0 1012 aaPredicted RBP15.86■□□□□ 0.13
COL6A3-207ENST00000433762 LDHAL6AQ6ZMR3 332 aa15.86■□□□□ 0.13
COL6A3-207ENST00000433762 CHST3Q7LGC8 479 aa15.86■□□□□ 0.13
COL6A3-207ENST00000433762 CCDC150Q8NCX0 1101 aa15.86■□□□□ 0.13
COL6A3-207ENST00000433762 FAM89AQ96GI7 184 aa15.86■□□□□ 0.13
COL6A3-207ENST00000433762 TBC1D2BQ9UPU7 963 aa15.86■□□□□ 0.13
COL6A3-207ENST00000433762 MROH5Q6ZUA9 1318 aa15.85■□□□□ 0.13
COL6A3-207ENST00000433762 PDE8BO95263 885 aa15.85■□□□□ 0.13
COL6A3-207ENST00000433762 ITGA6P23229 1130 aa15.85■□□□□ 0.13
COL6A3-207ENST00000433762 GUCY1B3Q02153 619 aa15.85■□□□□ 0.13
COL6A3-207ENST00000433762 NYAP1Q6ZVC0 841 aa15.85■□□□□ 0.13
COL6A3-207ENST00000433762 DNAJC10Q8IXB1 793 aa15.85■□□□□ 0.13
COL6A3-207ENST00000433762 CLIC4Q9Y696 253 aa15.85■□□□□ 0.13
COL6A3-207ENST00000433762 COL14A1Q05707 1796 aaKnown RBP15.85■□□□□ 0.13
COL6A3-207ENST00000433762 BCL9O00512 1426 aa15.85■□□□□ 0.13
COL6A3-207ENST00000433762 PDE8AO60658 829 aa15.85■□□□□ 0.13
COL6A3-207ENST00000433762 SLC3A2P08195 630 aaKnown RBP15.85■□□□□ 0.13
COL6A3-207ENST00000433762 LIFRP42702 1097 aa15.85■□□□□ 0.13
COL6A3-207ENST00000433762 RCAN1P53805 252 aa15.85■□□□□ 0.13
COL6A3-207ENST00000433762 HAND2P61296 217 aa15.85■□□□□ 0.13
COL6A3-207ENST00000433762 CCZ1BP86790 482 aa15.84■□□□□ 0.13
COL6A3-207ENST00000433762 CCZ1P86791 482 aaPredicted RBP15.84■□□□□ 0.13
COL6A3-207ENST00000433762 AOPEPQ8N6M6 819 aa15.84■□□□□ 0.13
COL6A3-207ENST00000433762 CERKQ8TCT0 537 aa15.84■□□□□ 0.13
COL6A3-207ENST00000433762 NOL10Q9BSC4 688 aaKnown RBP15.84■□□□□ 0.13
COL6A3-207ENST00000433762 NBPF3Q9H094 633 aa15.84■□□□□ 0.13
COL6A3-207ENST00000433762 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.84■□□□□ 0.13
COL6A3-207ENST00000433762 TUBE1Q9UJT0 475 aa15.84■□□□□ 0.13
COL6A3-207ENST00000433762 BCORQ6W2J9 1755 aa15.84■□□□□ 0.13
COL6A3-207ENST00000433762 RREB1Q92766 1687 aa15.84■□□□□ 0.13
COL6A3-207ENST00000433762 ZNF202O95125 648 aa15.84■□□□□ 0.13
COL6A3-207ENST00000433762 METAP2P50579 478 aaKnown RBP eCLIP15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms