RNA–Protein interactions for RNA: ENST00000427157.1

LINC02541-201, Transcript of long intergenic non-protein coding RNA 2541, humanhuman

TSL 3 BASIC

Gene LINC02541, Length 327 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02541-201ENST00000427157 FBXL6Q8N531 539 aa7.07□□□□□ -1.28
LINC02541-201ENST00000427157 FBLIM1Q8WUP2 373 aa7.07□□□□□ -1.28
LINC02541-201ENST00000427157 NPHS2Q9NP85 383 aa7.07□□□□□ -1.28
LINC02541-201ENST00000427157 FAM95CA0A1B0GW59 222 aa7.06□□□□□ -1.28
LINC02541-201ENST00000427157 GPR182O15218 404 aa7.06□□□□□ -1.28
LINC02541-201ENST00000427157 EIF4EBP3O60516 100 aaPredicted RBP7.06□□□□□ -1.28
LINC02541-201ENST00000427157 CPNE3O75131 537 aaKnown RBP7.06□□□□□ -1.28
LINC02541-201ENST00000427157 F13BP05160 661 aa7.06□□□□□ -1.28
LINC02541-201ENST00000427157 NEFLP07196 543 aa7.06□□□□□ -1.28
LINC02541-201ENST00000427157 HOXA10P31260 410 aaPredicted RBP7.06□□□□□ -1.28
LINC02541-201ENST00000427157 USP11P51784 963 aa7.06□□□□□ -1.28
LINC02541-201ENST00000427157 SOX4Q06945 474 aaPredicted RBP7.06□□□□□ -1.28
LINC02541-201ENST00000427157 PDE3BQ13370 1112 aa7.06□□□□□ -1.28
LINC02541-201ENST00000427157 TXNDC2Q86VQ3 553 aa7.06□□□□□ -1.28
LINC02541-201ENST00000427157 SHISA5Q8N114 240 aa7.06□□□□□ -1.28
LINC02541-201ENST00000427157 RETREG2Q8NC44 543 aa7.06□□□□□ -1.28
LINC02541-201ENST00000427157 ARID3AQ99856 593 aa7.06□□□□□ -1.28
LINC02541-201ENST00000427157 TRIM56Q9BRZ2 755 aaKnown RBP7.06□□□□□ -1.28
LINC02541-201ENST00000427157 ZNF576Q9H609 170 aa7.06□□□□□ -1.28
LINC02541-201ENST00000427157 PIM2Q9P1W9 311 aa7.06□□□□□ -1.28
LINC02541-201ENST00000427157 B3GALT4O96024 378 aa7.05□□□□□ -1.28
LINC02541-201ENST00000427157 IGHA2P01877 340 aa7.05□□□□□ -1.28
LINC02541-201ENST00000427157 CYP11A1P05108 521 aa7.05□□□□□ -1.28
LINC02541-201ENST00000427157 ITPKAP23677 461 aa7.05□□□□□ -1.28
LINC02541-201ENST00000427157 POU4F3Q15319 338 aa7.05□□□□□ -1.28
LINC02541-201ENST00000427157 NFKBIBQ15653 356 aa7.05□□□□□ -1.28
LINC02541-201ENST00000427157 PAOXQ6QHF9 649 aa7.05□□□□□ -1.28
LINC02541-201ENST00000427157 KRTAP4-12Q9BQ66 201 aa7.05□□□□□ -1.28
LINC02541-201ENST00000427157 EHD4Q9H223 541 aa7.05□□□□□ -1.28
LINC02541-201ENST00000427157 ACTL7BQ9Y614 415 aa7.05□□□□□ -1.28
LINC02541-201ENST00000427157 COL17A1Q9UMD9 1497 aaPredicted RBP7.04□□□□□ -1.28
LINC02541-201ENST00000427157 ECEL1O95672 775 aa7.04□□□□□ -1.28
LINC02541-201ENST00000427157 IRAK1P51617 712 aa7.04□□□□□ -1.28
LINC02541-201ENST00000427157 EZH1Q92800 747 aaPredicted RBP7.04□□□□□ -1.28
LINC02541-201ENST00000427157 CITED4Q96RK1 184 aa7.04□□□□□ -1.28
LINC02541-201ENST00000427157 ABCB6Q9NP58 842 aa7.04□□□□□ -1.28
LINC02541-201ENST00000427157 ATG3Q9NT62 314 aa7.04□□□□□ -1.28
LINC02541-201ENST00000427157 ADMP35318 185 aa7.03□□□□□ -1.28
LINC02541-201ENST00000427157 GIMAP7Q8NHV1 300 aa7.03□□□□□ -1.28
LINC02541-201ENST00000427157 OSBPL1AQ9BXW6 950 aa7.03□□□□□ -1.28
LINC02541-201ENST00000427157 LEMD3Q9Y2U8 911 aa7.03□□□□□ -1.28
LINC02541-201ENST00000427157 EIF1AYO14602 144 aaKnown RBP7.02□□□□□ -1.29
LINC02541-201ENST00000427157 FOSL1P15407 271 aa7.02□□□□□ -1.29
LINC02541-201ENST00000427157 RAB6AP20340 208 aa7.02□□□□□ -1.29
LINC02541-201ENST00000427157 CPSF6Q16630 551 aaKnown RBP eCLIP7.02□□□□□ -1.29
LINC02541-201ENST00000427157 MSMPQ1L6U9 139 aa7.02□□□□□ -1.29
LINC02541-201ENST00000427157 AKAP4Q5JQC9 854 aa7.02□□□□□ -1.29
LINC02541-201ENST00000427157 HP1BP3Q5SSJ5 553 aaPredicted RBP7.02□□□□□ -1.29
LINC02541-201ENST00000427157 CCDC74AQ96AQ1 378 aa7.02□□□□□ -1.29
LINC02541-201ENST00000427157 CORO1BQ9BR76 489 aa7.02□□□□□ -1.29
LINC02541-201ENST00000427157 YIPF2Q9BWQ6 316 aa7.02□□□□□ -1.29
LINC02541-201ENST00000427157 NIF3L1Q9GZT8 377 aa7.02□□□□□ -1.29
LINC02541-201ENST00000427157 PRKAG2Q9UGJ0 569 aa7.02□□□□□ -1.29
LINC02541-201ENST00000427157 WNT11O96014 354 aa7.01□□□□□ -1.29
LINC02541-201ENST00000427157 PRPF40BQ6NWY9 871 aaKnown RBP7.01□□□□□ -1.29
LINC02541-201ENST00000427157 ZAR1Q86SH2 424 aa7.01□□□□□ -1.29
LINC02541-201ENST00000427157 DDX54Q8TDD1 881 aaKnown RBP7.01□□□□□ -1.29
LINC02541-201ENST00000427157 TMC1Q8TDI8 760 aa7.01□□□□□ -1.29
LINC02541-201ENST00000427157 GATA6Q92908 595 aa7.01□□□□□ -1.29
LINC02541-201ENST00000427157 TBC1D32Q96NH3 1257 aa7.01□□□□□ -1.29
LINC02541-201ENST00000427157 DNAJC25Q9H1X3 360 aa7.01□□□□□ -1.29
LINC02541-201ENST00000427157 FAM105AQ9NUU6 356 aa7.01□□□□□ -1.29
LINC02541-201ENST00000427157 AP4E1Q9UPM8 1137 aa7.01□□□□□ -1.29
LINC02541-201ENST00000427157 NFICP08651 508 aa7□□□□□ -1.29
LINC02541-201ENST00000427157 PTPN12Q05209 780 aaKnown RBP7□□□□□ -1.29
LINC02541-201ENST00000427157 DYMQ7RTS9 669 aa7□□□□□ -1.29
LINC02541-201ENST00000427157 METTL22Q9BUU2 404 aaPredicted RBP7□□□□□ -1.29
LINC02541-201ENST00000427157 SEMA6CQ9H3T2 930 aa7□□□□□ -1.29
LINC02541-201ENST00000427157 ZFYVE1Q9HBF4 777 aa7□□□□□ -1.29
LINC02541-201ENST00000427157 RAD18Q9NS91 495 aa7□□□□□ -1.29
LINC02541-201ENST00000427157 FAM170BA6NMN3 283 aa6.99□□□□□ -1.29
LINC02541-201ENST00000427157 SUPT5HO00267 1087 aaKnown RBP6.99□□□□□ -1.29
LINC02541-201ENST00000427157 GADD45BO75293 160 aaPredicted RBP6.99□□□□□ -1.29
LINC02541-201ENST00000427157 TAL1P17542 331 aaPredicted RBP6.99□□□□□ -1.29
LINC02541-201ENST00000427157 GRM2Q14416 872 aa6.99□□□□□ -1.29
LINC02541-201ENST00000427157 PDE3AQ14432 1141 aa6.99□□□□□ -1.29
LINC02541-201ENST00000427157 GLIS3Q8NEA6 775 aa6.99□□□□□ -1.29
LINC02541-201ENST00000427157 WDR18Q9BV38 432 aa6.99□□□□□ -1.29
LINC02541-201ENST00000427157 RBCK1Q9BYM8 510 aa6.99□□□□□ -1.29
LINC02541-201ENST00000427157 ACSS3Q9H6R3 686 aa6.99□□□□□ -1.29
LINC02541-201ENST00000427157 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.98□□□□□ -1.29
LINC02541-201ENST00000427157 TMEM238LA0A1B0GVL6 79 aa6.98□□□□□ -1.29
LINC02541-201ENST00000427157 AOC2O75106 756 aa6.98□□□□□ -1.29
LINC02541-201ENST00000427157 FAAP100Q0VG06 881 aa6.98□□□□□ -1.29
LINC02541-201ENST00000427157 AP3B2Q13367 1082 aa6.98□□□□□ -1.29
LINC02541-201ENST00000427157 MAP7Q14244 749 aa6.98□□□□□ -1.29
LINC02541-201ENST00000427157 KRTAP1-3Q8IUG1 177 aa6.98□□□□□ -1.29
LINC02541-201ENST00000427157 CCER1Q8TC90 406 aaPredicted RBP6.98□□□□□ -1.29
LINC02541-201ENST00000427157 ALKBH8Q96BT7 664 aaKnown RBP6.98□□□□□ -1.29
LINC02541-201ENST00000427157 DMRTB1Q96MA1 342 aa6.98□□□□□ -1.29
LINC02541-201ENST00000427157 CSRNP1Q96S65 589 aa6.98□□□□□ -1.29
LINC02541-201ENST00000427157 GSX1Q9H4S2 264 aaPredicted RBP6.98□□□□□ -1.29
LINC02541-201ENST00000427157 CYP26A1O43174 497 aa6.97□□□□□ -1.29
LINC02541-201ENST00000427157 PAX4O43316 350 aa6.97□□□□□ -1.29
LINC02541-201ENST00000427157 ASPAP45381 313 aa6.97□□□□□ -1.29
LINC02541-201ENST00000427157 ZNF157P51786 506 aaPredicted RBP6.97□□□□□ -1.29
LINC02541-201ENST00000427157 RPS26P11Q5JNZ5 115 aaPredicted RBP6.97□□□□□ -1.29
LINC02541-201ENST00000427157 LCE3BQ5TA77 95 aa6.97□□□□□ -1.29
LINC02541-201ENST00000427157 KRTAP19-1Q8IUB9 90 aa6.97□□□□□ -1.29
LINC02541-201ENST00000427157 ABI1Q8IZP0 508 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms