RNA–Protein interactions for RNA: ENST00000425876.6

CDK3-201, Transcript of cyclin dependent kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK3, Length 1,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3-201ENST00000425876 SALL1Q9NSC2 1324 aa17.1■□□□□ 0.33
CDK3-201ENST00000425876 ZBTB7AO95365 584 aa17.1■□□□□ 0.33
CDK3-201ENST00000425876 CYP7A1P22680 504 aa17.1■□□□□ 0.33
CDK3-201ENST00000425876 ME3Q16798 604 aa17.1■□□□□ 0.33
CDK3-201ENST00000425876 ZNF804AQ7Z570 1209 aa17.1■□□□□ 0.33
CDK3-201ENST00000425876 TXNRD3Q86VQ6 643 aa17.1■□□□□ 0.33
CDK3-201ENST00000425876 SP8Q8IXZ3 490 aa17.1■□□□□ 0.33
CDK3-201ENST00000425876 TDRD7Q8NHU6 1098 aaKnown RBP17.1■□□□□ 0.33
CDK3-201ENST00000425876 RAI14Q9P0K7 980 aa17.1■□□□□ 0.33
CDK3-201ENST00000425876 GGA1Q9UJY5 639 aa17.1■□□□□ 0.33
CDK3-201ENST00000425876 LRRC37AA6NMS7 1700 aa17.09■□□□□ 0.33
CDK3-201ENST00000425876 WDR19Q8NEZ3 1342 aa17.09■□□□□ 0.33
CDK3-201ENST00000425876 LARGE1O95461 756 aa17.09■□□□□ 0.33
CDK3-201ENST00000425876 SPTY2D1Q68D10 685 aaPredicted RBP17.09■□□□□ 0.33
CDK3-201ENST00000425876 CACNA1SQ13698 1873 aa17.08■□□□□ 0.32
CDK3-201ENST00000425876 A0A0G2JLW4 131 aa17.08■□□□□ 0.32
CDK3-201ENST00000425876 DDX11L8A8MPP1 907 aa17.08■□□□□ 0.32
CDK3-201ENST00000425876 ALDH1B1P30837 517 aa17.08■□□□□ 0.32
CDK3-201ENST00000425876 Q6ZUG5 572 aa17.08■□□□□ 0.32
CDK3-201ENST00000425876 WDR66Q8TBY9 1149 aa17.08■□□□□ 0.32
CDK3-201ENST00000425876 LARP6Q9BRS8 491 aaKnown RBP17.08■□□□□ 0.32
CDK3-201ENST00000425876 NACAP1Q9BZK3 213 aa17.08■□□□□ 0.32
CDK3-201ENST00000425876 ARMT1Q9H993 441 aa17.08■□□□□ 0.32
CDK3-201ENST00000425876 NSFL1CQ9UNZ2 370 aaKnown RBP17.08■□□□□ 0.32
CDK3-201ENST00000425876 ATP6V0A2Q9Y487 856 aa17.08■□□□□ 0.32
CDK3-201ENST00000425876 MYH13Q9UKX3 1938 aa17.08■□□□□ 0.32
CDK3-201ENST00000425876 LAMA4Q16363 1823 aa17.07■□□□□ 0.32
CDK3-201ENST00000425876 GSG1L2A8MUP6 293 aa17.07■□□□□ 0.32
CDK3-201ENST00000425876 PPEF1O14829 653 aaPredicted RBP17.07■□□□□ 0.32
CDK3-201ENST00000425876 UFL1O94874 794 aa17.07■□□□□ 0.32
CDK3-201ENST00000425876 BRD1O95696 1058 aa17.07■□□□□ 0.32
CDK3-201ENST00000425876 APPP05067 770 aa17.07■□□□□ 0.32
CDK3-201ENST00000425876 PDIA4P13667 645 aaKnown RBP17.07■□□□□ 0.32
CDK3-201ENST00000425876 PTMSP20962 102 aa17.07■□□□□ 0.32
CDK3-201ENST00000425876 NAA16Q6N069 864 aaPredicted RBP17.07■□□□□ 0.32
CDK3-201ENST00000425876 IFNL3Q8IZI9 196 aa17.07■□□□□ 0.32
CDK3-201ENST00000425876 NCOA7Q8NI08 942 aa17.07■□□□□ 0.32
CDK3-201ENST00000425876 MASTLQ96GX5 879 aa17.07■□□□□ 0.32
CDK3-201ENST00000425876 TCEANC2Q96MN5 208 aa17.07■□□□□ 0.32
CDK3-201ENST00000425876 SMC3Q9UQE7 1217 aa17.07■□□□□ 0.32
CDK3-201ENST00000425876 ZDHHC9Q9Y397 364 aa17.07■□□□□ 0.32
CDK3-201ENST00000425876 HAND2P61296 217 aa17.06■□□□□ 0.32
CDK3-201ENST00000425876 CCDC83Q8IWF9 413 aa17.06■□□□□ 0.32
CDK3-201ENST00000425876 LCORLQ8N3X6 602 aa17.06■□□□□ 0.32
CDK3-201ENST00000425876 NSUN4Q96CB9 384 aaKnown RBP17.06■□□□□ 0.32
CDK3-201ENST00000425876 RIOK1Q9BRS2 568 aaKnown RBP17.06■□□□□ 0.32
CDK3-201ENST00000425876 EPB41L4AQ9HCS5 686 aaPredicted RBP17.06■□□□□ 0.32
CDK3-201ENST00000425876 MAGEB6P1A0A0J9YX57 407 aa17.06■□□□□ 0.32
CDK3-201ENST00000425876 IL1R1P14778 569 aa17.06■□□□□ 0.32
CDK3-201ENST00000425876 MCM5P33992 734 aa17.06■□□□□ 0.32
CDK3-201ENST00000425876 ST3GAL1Q11201 340 aa17.06■□□□□ 0.32
CDK3-201ENST00000425876 PKP1Q13835 747 aa17.06■□□□□ 0.32
CDK3-201ENST00000425876 MB21D2Q8IYB1 491 aaPredicted RBP17.06■□□□□ 0.32
CDK3-201ENST00000425876 TBC1D16Q8TBP0 767 aa17.06■□□□□ 0.32
CDK3-201ENST00000425876 NAPBQ9H115 298 aa17.06■□□□□ 0.32
CDK3-201ENST00000425876 ATF5Q9Y2D1 282 aaPredicted RBP17.06■□□□□ 0.32
CDK3-201ENST00000425876 SLC4A4Q9Y6R1 1079 aa17.06■□□□□ 0.32
CDK3-201ENST00000425876 LTBP1Q14766 1721 aa17.05■□□□□ 0.32
CDK3-201ENST00000425876 DUOX1Q9NRD9 1551 aa17.05■□□□□ 0.32
CDK3-201ENST00000425876 EVCP57679 992 aa17.05■□□□□ 0.32
CDK3-201ENST00000425876 FGD1P98174 961 aa17.05■□□□□ 0.32
CDK3-201ENST00000425876 MECOMQ03112 1051 aa17.05■□□□□ 0.32
CDK3-201ENST00000425876 TRDNQ13061 729 aa17.05■□□□□ 0.32
CDK3-201ENST00000425876 CHAF1AQ13111 956 aaPredicted RBP17.05■□□□□ 0.32
CDK3-201ENST00000425876 GIMAP6Q6P9H5 292 aa17.05■□□□□ 0.32
CDK3-201ENST00000425876 RALYLQ86SE5 291 aaKnown RBP17.05■□□□□ 0.32
CDK3-201ENST00000425876 ADGRA1Q86SQ6 560 aa17.05■□□□□ 0.32
CDK3-201ENST00000425876 ZNF384Q8TF68 577 aa17.05■□□□□ 0.32
CDK3-201ENST00000425876 BRF1Q92994 677 aa17.05■□□□□ 0.32
CDK3-201ENST00000425876 CHMP4CQ96CF2 233 aa17.05■□□□□ 0.32
CDK3-201ENST00000425876 NBPF3Q9H094 633 aa17.05■□□□□ 0.32
CDK3-201ENST00000425876 WDR33Q9C0J8 1336 aaKnown RBP17.04■□□□□ 0.32
CDK3-201ENST00000425876 BAG4O95429 457 aaKnown RBP17.04■□□□□ 0.32
CDK3-201ENST00000425876 MSL1Q68DK7 614 aa17.04■□□□□ 0.32
CDK3-201ENST00000425876 SLC51AQ86UW1 340 aa17.04■□□□□ 0.32
CDK3-201ENST00000425876 MIGA1Q8NAN2 632 aa17.04■□□□□ 0.32
CDK3-201ENST00000425876 GTF3C6Q969F1 213 aa17.04■□□□□ 0.32
CDK3-201ENST00000425876 ZNF274Q96GC6 653 aaPredicted RBP17.04■□□□□ 0.32
CDK3-201ENST00000425876 MTFR1LQ9H019 292 aa17.04■□□□□ 0.32
CDK3-201ENST00000425876 CD209Q9NNX6 404 aa17.04■□□□□ 0.32
CDK3-201ENST00000425876 POLLQ9UGP5 575 aa17.04■□□□□ 0.32
CDK3-201ENST00000425876 MAST2Q6P0Q8 1798 aa17.04■□□□□ 0.32
CDK3-201ENST00000425876 GOLGA6L22H0YM25 854 aa17.03■□□□□ 0.32
CDK3-201ENST00000425876 PFKFB2O60825 505 aa17.03■□□□□ 0.32
CDK3-201ENST00000425876 STYK1Q6J9G0 422 aa17.03■□□□□ 0.32
CDK3-201ENST00000425876 NECAB1Q8N987 351 aa17.03■□□□□ 0.32
CDK3-201ENST00000425876 SPON1Q9HCB6 807 aa17.03■□□□□ 0.32
CDK3-201ENST00000425876 PRKAB2O43741 272 aa17.02■□□□□ 0.32
CDK3-201ENST00000425876 GJB2P29033 226 aa17.02■□□□□ 0.32
CDK3-201ENST00000425876 PRDX5P30044 214 aa17.02■□□□□ 0.32
CDK3-201ENST00000425876 PTGER2P43116 358 aa17.02■□□□□ 0.32
CDK3-201ENST00000425876 TBC1D10CQ8IV04 446 aa17.02■□□□□ 0.32
CDK3-201ENST00000425876 LLPHQ9BRT6 129 aaKnown RBP17.02■□□□□ 0.32
CDK3-201ENST00000425876 CNNM2Q9H8M5 875 aa17.02■□□□□ 0.32
CDK3-201ENST00000425876 TIAM2Q8IVF5 1701 aa17.02■□□□□ 0.32
CDK3-201ENST00000425876 COL11A2P13942 1736 aaPredicted RBP17.02■□□□□ 0.31
CDK3-201ENST00000425876 PRC1O43663 620 aa17.02■□□□□ 0.31
CDK3-201ENST00000425876 LDHBP07195 334 aaKnown RBP17.02■□□□□ 0.31
CDK3-201ENST00000425876 TDO2P48775 406 aa17.02■□□□□ 0.31
CDK3-201ENST00000425876 GSTO1P78417 241 aa17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms