RNA–Protein interactions for RNA: ENST00000423442.6

LINC00458-201, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,060 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-201ENST00000423442 MKNK1Q9BUB5 465 aa8.74□□□□□ -1.01
LINC00458-201ENST00000423442 LACRTQ9GZZ8 138 aa8.74□□□□□ -1.01
LINC00458-201ENST00000423442 CFDP1Q9UEE9 299 aaPredicted RBP8.74□□□□□ -1.01
LINC00458-201ENST00000423442 CCNB3Q8WWL7 1395 aa8.73□□□□□ -1.01
LINC00458-201ENST00000423442 TNFRSF10BO14763 440 aa8.73□□□□□ -1.01
LINC00458-201ENST00000423442 CDC25BP30305 580 aa8.73□□□□□ -1.01
LINC00458-201ENST00000423442 NAA30Q147X3 362 aaPredicted RBP8.73□□□□□ -1.01
LINC00458-201ENST00000423442 ADAMTSL4Q6UY14 1074 aa8.73□□□□□ -1.01
LINC00458-201ENST00000423442 SLC51AQ86UW1 340 aa8.73□□□□□ -1.01
LINC00458-201ENST00000423442 KCNK4Q9NYG8 393 aa8.73□□□□□ -1.01
LINC00458-201ENST00000423442 RAXQ9Y2V3 346 aa8.73□□□□□ -1.01
LINC00458-201ENST00000423442 INO80Q9ULG1 1556 aaPredicted RBP8.73□□□□□ -1.01
LINC00458-201ENST00000423442 MED26O95402 600 aa8.72□□□□□ -1.01
LINC00458-201ENST00000423442 CD97P48960 835 aa8.72□□□□□ -1.01
LINC00458-201ENST00000423442 CEP135Q66GS9 1140 aa8.72□□□□□ -1.01
LINC00458-201ENST00000423442 ANKLE2Q86XL3 938 aa8.72□□□□□ -1.01
LINC00458-201ENST00000423442 DCAF11Q8TEB1 546 aa8.72□□□□□ -1.01
LINC00458-201ENST00000423442 STK32AQ8WU08 396 aa8.72□□□□□ -1.01
LINC00458-201ENST00000423442 PIK3R5Q8WYR1 880 aa8.72□□□□□ -1.01
LINC00458-201ENST00000423442 MUC3BQ9H195 1237 aa8.72□□□□□ -1.01
LINC00458-201ENST00000423442 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.72□□□□□ -1.01
LINC00458-201ENST00000423442 STRCP1A6NGW2 1772 aa8.71□□□□□ -1.01
LINC00458-201ENST00000423442 KRTAP4-8A0A0G2JLE6 195 aa8.71□□□□□ -1.02
LINC00458-201ENST00000423442 CARD10Q9BWT7 1032 aa8.71□□□□□ -1.02
LINC00458-201ENST00000423442 STOML1Q9UBI4 398 aa8.71□□□□□ -1.02
LINC00458-201ENST00000423442 TNRQ92752 1358 aa8.71□□□□□ -1.02
LINC00458-201ENST00000423442 GPATCH8Q9UKJ3 1502 aaKnown RBP8.7□□□□□ -1.02
LINC00458-201ENST00000423442 TM4SF5O14894 197 aa8.7□□□□□ -1.02
LINC00458-201ENST00000423442 PTCD1O75127 700 aaKnown RBP8.7□□□□□ -1.02
LINC00458-201ENST00000423442 TGFB1P01137 390 aa8.7□□□□□ -1.02
LINC00458-201ENST00000423442 IGLV1-40P01703 118 aa8.7□□□□□ -1.02
LINC00458-201ENST00000423442 CD68P34810 354 aaPredicted RBP8.7□□□□□ -1.02
LINC00458-201ENST00000423442 HYAL2Q12891 473 aa8.7□□□□□ -1.02
LINC00458-201ENST00000423442 ACAD11Q709F0 780 aa8.7□□□□□ -1.02
LINC00458-201ENST00000423442 CACTIN-AS1Q8N1I8 211 aa8.7□□□□□ -1.02
LINC00458-201ENST00000423442 ARMC10Q8N2F6 343 aa8.7□□□□□ -1.02
LINC00458-201ENST00000423442 RASSF4Q9H2L5 321 aa8.7□□□□□ -1.02
LINC00458-201ENST00000423442 NPHP4O75161 1426 aaPredicted RBP8.7□□□□□ -1.02
LINC00458-201ENST00000423442 LRRC7Q96NW7 1537 aa8.7□□□□□ -1.02
LINC00458-201ENST00000423442 ADGBQ8N7X0 1667 aa8.69□□□□□ -1.02
LINC00458-201ENST00000423442 CYP2E1P05181 493 aaPredicted RBP8.69□□□□□ -1.02
LINC00458-201ENST00000423442 CDC27P30260 824 aa8.69□□□□□ -1.02
LINC00458-201ENST00000423442 SCNN1AP37088 669 aa8.69□□□□□ -1.02
LINC00458-201ENST00000423442 ZAP70P43403 619 aa8.69□□□□□ -1.02
LINC00458-201ENST00000423442 THEMISQ8N1K5 641 aaPredicted RBP8.69□□□□□ -1.02
LINC00458-201ENST00000423442 GPR152Q8TDT2 470 aa8.69□□□□□ -1.02
LINC00458-201ENST00000423442 SPACA7Q96KW9 195 aa8.69□□□□□ -1.02
LINC00458-201ENST00000423442 KIAA1107Q9UPP5 1409 aa8.69□□□□□ -1.02
LINC00458-201ENST00000423442 ZBTB39O15060 712 aa8.68□□□□□ -1.02
LINC00458-201ENST00000423442 SMNDC1O75940 238 aaKnown RBP eCLIP8.68□□□□□ -1.02
LINC00458-201ENST00000423442 TTC39BQ5VTQ0 682 aaPredicted RBP8.68□□□□□ -1.02
LINC00458-201ENST00000423442 COL26A1Q96A83 441 aa8.68□□□□□ -1.02
LINC00458-201ENST00000423442 CXXC1Q9P0U4 656 aaPredicted RBP8.68□□□□□ -1.02
LINC00458-201ENST00000423442 MED14O60244 1454 aa8.68□□□□□ -1.02
LINC00458-201ENST00000423442 DEPDC5O75140 1603 aa8.68□□□□□ -1.02
LINC00458-201ENST00000423442 RNF17Q9BXT8 1623 aaKnown RBP8.68□□□□□ -1.02
LINC00458-201ENST00000423442 DDX3YO15523 660 aaKnown RBP8.67□□□□□ -1.02
LINC00458-201ENST00000423442 DHX15O43143 795 aaKnown RBP8.67□□□□□ -1.02
LINC00458-201ENST00000423442 PZPP20742 1482 aa8.67□□□□□ -1.02
LINC00458-201ENST00000423442 IQGAP1P46940 1657 aa8.67□□□□□ -1.02
LINC00458-201ENST00000423442 ELOAQ14241 798 aaKnown RBP8.67□□□□□ -1.02
LINC00458-201ENST00000423442 KIAA1211Q6ZU35 1233 aa8.67□□□□□ -1.02
LINC00458-201ENST00000423442 PLEKHH2Q8IVE3 1493 aa8.67□□□□□ -1.02
LINC00458-201ENST00000423442 SH2B1Q9NRF2 756 aaPredicted RBP8.67□□□□□ -1.02
LINC00458-201ENST00000423442 FAM13BQ9NYF5 915 aa8.67□□□□□ -1.02
LINC00458-201ENST00000423442 UGGT1Q9NYU2 1555 aa8.67□□□□□ -1.02
LINC00458-201ENST00000423442 FSCN2O14926 492 aa8.66□□□□□ -1.02
LINC00458-201ENST00000423442 KIF3BO15066 747 aa8.66□□□□□ -1.02
LINC00458-201ENST00000423442 GSC2O15499 205 aa8.66□□□□□ -1.02
LINC00458-201ENST00000423442 PAX4O43316 350 aa8.66□□□□□ -1.02
LINC00458-201ENST00000423442 TSPY4P0CV99 314 aa8.66□□□□□ -1.02
LINC00458-201ENST00000423442 TSPY10P0CW01 314 aa8.66□□□□□ -1.02
LINC00458-201ENST00000423442 EPHA1P21709 976 aa8.66□□□□□ -1.02
LINC00458-201ENST00000423442 FNDC3AQ9Y2H6 1198 aaKnown RBP8.66□□□□□ -1.02
LINC00458-201ENST00000423442 SETD1AO15047 1707 aaKnown RBP8.66□□□□□ -1.02
LINC00458-201ENST00000423442 SYNMO15061 1565 aa8.65□□□□□ -1.02
LINC00458-201ENST00000423442 FAM135AQ9P2D6 1515 aa8.65□□□□□ -1.02
LINC00458-201ENST00000423442 VPS8Q8N3P4 1428 aa8.65□□□□□ -1.02
LINC00458-201ENST00000423442 MIA2Q96PC5 1412 aa8.65□□□□□ -1.02
LINC00458-201ENST00000423442 DHX29Q7Z478 1369 aaKnown RBP8.65□□□□□ -1.02
LINC00458-201ENST00000423442 ZNF644Q9H582 1327 aaPredicted RBP8.65□□□□□ -1.02
LINC00458-201ENST00000423442 WASHC2CQ9Y4E1 1318 aa8.65□□□□□ -1.02
LINC00458-201ENST00000423442 COBLO75128 1261 aa8.65□□□□□ -1.02
LINC00458-201ENST00000423442 KIF4AO95239 1232 aa8.65□□□□□ -1.02
LINC00458-201ENST00000423442 DUOXA2Q1HG44 320 aa8.65□□□□□ -1.02
LINC00458-201ENST00000423442 ZDHHC13Q8IUH4 622 aa8.65□□□□□ -1.02
LINC00458-201ENST00000423442 TRIM42Q8IWZ5 723 aa8.65□□□□□ -1.02
LINC00458-201ENST00000423442 FOXD4L4Q8WXT5 416 aaPredicted RBP8.65□□□□□ -1.02
LINC00458-201ENST00000423442 UTP4Q969X6 686 aaKnown RBP8.65□□□□□ -1.02
LINC00458-201ENST00000423442 PBX4Q9BYU1 374 aa8.65□□□□□ -1.02
LINC00458-201ENST00000423442 CEP41Q9BYV8 373 aa8.65□□□□□ -1.02
LINC00458-201ENST00000423442 C7orf69Q9H7B7 122 aa8.65□□□□□ -1.02
LINC00458-201ENST00000423442 ABI2Q9NYB9 513 aaPredicted RBP8.65□□□□□ -1.02
LINC00458-201ENST00000423442 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.65□□□□□ -1.02
LINC00458-201ENST00000423442 NLRP1Q9C000 1473 aa8.64□□□□□ -1.03
LINC00458-201ENST00000423442 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.64□□□□□ -1.03
LINC00458-201ENST00000423442 ADAM11O75078 769 aa8.64□□□□□ -1.03
LINC00458-201ENST00000423442 SRPK2P78362 688 aaKnown RBP8.64□□□□□ -1.03
LINC00458-201ENST00000423442 NFIAQ12857 509 aa8.64□□□□□ -1.03
LINC00458-201ENST00000423442 CEP120Q8N960 986 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms