RNA–Protein interactions for RNA: ENST00000422785.7

CDCA3-202, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 2,760 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-202ENST00000422785 UBAP1LF5GYI3 381 aa16.17■□□□□ 0.18
CDCA3-202ENST00000422785 MYH15Q9Y2K3 1946 aa16.17■□□□□ 0.18
CDCA3-202ENST00000422785 ANKRD18AQ8IVF6 992 aa16.16■□□□□ 0.18
CDCA3-202ENST00000422785 PGBD1Q96JS3 809 aa16.16■□□□□ 0.18
CDCA3-202ENST00000422785 NUP62CLQ9H1M0 184 aa16.16■□□□□ 0.18
CDCA3-202ENST00000422785 COL4A1P02462 1669 aa16.16■□□□□ 0.18
CDCA3-202ENST00000422785 SCN7AQ01118 1682 aa16.16■□□□□ 0.18
CDCA3-202ENST00000422785 MBD4O95243 580 aa16.16■□□□□ 0.18
CDCA3-202ENST00000422785 KCNQ4P56696 695 aa16.16■□□□□ 0.18
CDCA3-202ENST00000422785 SLC10A5Q5PT55 438 aa16.16■□□□□ 0.18
CDCA3-202ENST00000422785 DDX19AQ9NUU7 478 aaKnown RBP16.16■□□□□ 0.18
CDCA3-202ENST00000422785 BSDC1Q9NW68 430 aaPredicted RBP16.16■□□□□ 0.18
CDCA3-202ENST00000422785 ANGEL1Q9UNK9 670 aaKnown RBP16.16■□□□□ 0.18
CDCA3-202ENST00000422785 C3orf67Q6ZVT6 689 aa16.15■□□□□ 0.18
CDCA3-202ENST00000422785 IFNL3Q8IZI9 196 aa16.15■□□□□ 0.18
CDCA3-202ENST00000422785 RCOR1Q9UKL0 485 aa16.15■□□□□ 0.18
CDCA3-202ENST00000422785 FOSBP53539 338 aa16.15■□□□□ 0.18
CDCA3-202ENST00000422785 MAP3K11Q16584 847 aa16.15■□□□□ 0.18
CDCA3-202ENST00000422785 CYB5R4Q7L1T6 521 aa16.15■□□□□ 0.18
CDCA3-202ENST00000422785 EPB41L4AQ9HCS5 686 aaPredicted RBP16.15■□□□□ 0.18
CDCA3-202ENST00000422785 DACT1Q9NYF0 836 aa16.15■□□□□ 0.18
CDCA3-202ENST00000422785 ZNF804BA4D1E1 1349 aa16.15■□□□□ 0.18
CDCA3-202ENST00000422785 PNPLA7Q6ZV29 1317 aa16.15■□□□□ 0.18
CDCA3-202ENST00000422785 CCDC192P0DO97 292 aa16.15■□□□□ 0.18
CDCA3-202ENST00000422785 GNAT2P19087 354 aa16.15■□□□□ 0.18
CDCA3-202ENST00000422785 UBE4AQ14139 1066 aa16.15■□□□□ 0.18
CDCA3-202ENST00000422785 PTF1AQ7RTS3 328 aa16.15■□□□□ 0.18
CDCA3-202ENST00000422785 TMEM87BQ96K49 555 aa16.15■□□□□ 0.18
CDCA3-202ENST00000422785 ZNF396Q96N95 335 aaPredicted RBP16.15■□□□□ 0.18
CDCA3-202ENST00000422785 NAPBQ9H115 298 aa16.15■□□□□ 0.18
CDCA3-202ENST00000422785 BCL2L12Q9HB09 334 aa16.15■□□□□ 0.18
CDCA3-202ENST00000422785 NARFQ9UHQ1 456 aa16.15■□□□□ 0.18
CDCA3-202ENST00000422785 SH2B2O14492 632 aaPredicted RBP16.14■□□□□ 0.17
CDCA3-202ENST00000422785 CPLX1O14810 134 aa16.14■□□□□ 0.17
CDCA3-202ENST00000422785 PPFIA3O75145 1194 aa16.14■□□□□ 0.17
CDCA3-202ENST00000422785 RPS6KA4O75676 772 aa16.14■□□□□ 0.17
CDCA3-202ENST00000422785 TBC1D9BQ66K14 1250 aa16.14■□□□□ 0.17
CDCA3-202ENST00000422785 ARMT1Q9H993 441 aa16.14■□□□□ 0.17
CDCA3-202ENST00000422785 DENND2AQ9ULE3 1009 aa16.14■□□□□ 0.17
CDCA3-202ENST00000422785 RGS22Q8NE09 1264 aa16.14■□□□□ 0.17
CDCA3-202ENST00000422785 BICD2Q8TD16 824 aa16.14■□□□□ 0.17
CDCA3-202ENST00000422785 PODXL2Q9NZ53 605 aa16.14■□□□□ 0.17
CDCA3-202ENST00000422785 A0A1B0GUL6 1792 aa16.14■□□□□ 0.17
CDCA3-202ENST00000422785 CASZ1Q86V15 1759 aa16.13■□□□□ 0.17
CDCA3-202ENST00000422785 GSG1L2A8MUP6 293 aa16.13■□□□□ 0.17
CDCA3-202ENST00000422785 B4E1Z4 1266 aa16.13■□□□□ 0.17
CDCA3-202ENST00000422785 NKX2-3Q8TAU0 364 aa16.13■□□□□ 0.17
CDCA3-202ENST00000422785 NYXQ9GZU5 481 aa16.13■□□□□ 0.17
CDCA3-202ENST00000422785 TNMDQ9H2S6 317 aa16.13■□□□□ 0.17
CDCA3-202ENST00000422785 CLSTN2Q9H4D0 955 aa16.13■□□□□ 0.17
CDCA3-202ENST00000422785 GNL3LQ9NVN8 582 aaKnown RBP16.13■□□□□ 0.17
CDCA3-202ENST00000422785 LRP2BPQ9P2M1 347 aa16.13■□□□□ 0.17
CDCA3-202ENST00000422785 ORC3Q9UBD5 711 aaPredicted RBP16.13■□□□□ 0.17
CDCA3-202ENST00000422785 NOL7Q9UMY1 257 aaKnown RBP16.13■□□□□ 0.17
CDCA3-202ENST00000422785 BTAF1O14981 1849 aa16.13■□□□□ 0.17
CDCA3-202ENST00000422785 NEDD4P46934 1319 aa16.13■□□□□ 0.17
CDCA3-202ENST00000422785 GTF2E1P29083 439 aaPredicted RBP16.13■□□□□ 0.17
CDCA3-202ENST00000422785 BICDL1Q6ZP65 573 aa16.13■□□□□ 0.17
CDCA3-202ENST00000422785 RBM43Q6ZSC3 357 aaKnown RBP16.13■□□□□ 0.17
CDCA3-202ENST00000422785 ILDR1Q86SU0 546 aaPredicted RBP16.13■□□□□ 0.17
CDCA3-202ENST00000422785 NACAP1Q9BZK3 213 aa16.13■□□□□ 0.17
CDCA3-202ENST00000422785 CCDC39Q9UFE4 941 aa16.13■□□□□ 0.17
CDCA3-202ENST00000422785 THSD7AQ9UPZ6 1657 aa16.12■□□□□ 0.17
CDCA3-202ENST00000422785 GUCY1B3Q02153 619 aa16.12■□□□□ 0.17
CDCA3-202ENST00000422785 C8orf76Q96K31 380 aa16.12■□□□□ 0.17
CDCA3-202ENST00000422785 USP21Q9UK80 565 aa16.12■□□□□ 0.17
CDCA3-202ENST00000422785 C4AP0C0L4 1744 aa16.12■□□□□ 0.17
CDCA3-202ENST00000422785 C4BP0C0L5 1744 aa16.12■□□□□ 0.17
CDCA3-202ENST00000422785 NHSQ6T4R5 1651 aa16.12■□□□□ 0.17
CDCA3-202ENST00000422785 CAMK4Q16566 473 aa16.12■□□□□ 0.17
CDCA3-202ENST00000422785 LCORLQ8N3X6 602 aa16.12■□□□□ 0.17
CDCA3-202ENST00000422785 FBXO18Q8NFZ0 1043 aa16.12■□□□□ 0.17
CDCA3-202ENST00000422785 IGDCC4Q8TDY8 1250 aa16.12■□□□□ 0.17
CDCA3-202ENST00000422785 USP28Q96RU2 1077 aa16.12■□□□□ 0.17
CDCA3-202ENST00000422785 CNNM2Q9H8M5 875 aa16.12■□□□□ 0.17
CDCA3-202ENST00000422785 MINPP1Q9UNW1 487 aa16.12■□□□□ 0.17
CDCA3-202ENST00000422785 TIAM2Q8IVF5 1701 aa16.12■□□□□ 0.17
CDCA3-202ENST00000422785 NR1I2O75469 434 aa16.11■□□□□ 0.17
CDCA3-202ENST00000422785 CEBPZQ03701 1054 aaKnown RBP16.11■□□□□ 0.17
CDCA3-202ENST00000422785 SETDB2Q96T68 719 aa16.11■□□□□ 0.17
CDCA3-202ENST00000422785 MSNP26038 577 aaKnown RBP16.11■□□□□ 0.17
CDCA3-202ENST00000422785 METAP2P50579 478 aaKnown RBP eCLIP16.11■□□□□ 0.17
CDCA3-202ENST00000422785 AKNAD1Q5T1N1 836 aa16.11■□□□□ 0.17
CDCA3-202ENST00000422785 APOA5Q6Q788 366 aa16.11■□□□□ 0.17
CDCA3-202ENST00000422785 SGMS1Q86VZ5 419 aa16.11■□□□□ 0.17
CDCA3-202ENST00000422785 RAB11FIP4Q86YS3 637 aa16.11■□□□□ 0.17
CDCA3-202ENST00000422785 SLC4A4Q9Y6R1 1079 aa16.11■□□□□ 0.17
CDCA3-202ENST00000422785 SPATA31A6Q5VVP1 1343 aa16.11■□□□□ 0.17
CDCA3-202ENST00000422785 CHD4Q14839 1912 aa16.1■□□□□ 0.17
CDCA3-202ENST00000422785 GNPATO15228 680 aa16.1■□□□□ 0.17
CDCA3-202ENST00000422785 ZPR1O75312 459 aa16.1■□□□□ 0.17
CDCA3-202ENST00000422785 GYG1P46976 350 aa16.1■□□□□ 0.17
CDCA3-202ENST00000422785 CAVIN4Q5BKX8 364 aa16.1■□□□□ 0.17
CDCA3-202ENST00000422785 SMIM5Q71RC9 77 aa16.1■□□□□ 0.17
CDCA3-202ENST00000422785 KRT23Q9C075 422 aa16.1■□□□□ 0.17
CDCA3-202ENST00000422785 FTOQ9C0B1 505 aaKnown RBP eCLIP16.1■□□□□ 0.17
CDCA3-202ENST00000422785 COL24A1Q17RW2 1714 aa16.1■□□□□ 0.17
CDCA3-202ENST00000422785 TAF1P21675 1872 aa16.1■□□□□ 0.17
CDCA3-202ENST00000422785 PRKAB2O43741 272 aa16.1■□□□□ 0.17
CDCA3-202ENST00000422785 CDKL5O76039 1030 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms