RNA–Protein interactions for RNA: ENST00000421523.5

HDAC8-212, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-212ENST00000421523 RTL5Q5HYW3 569 aaPredicted RBP7.4□□□□□ -1.22
HDAC8-212ENST00000421523 C17orf99Q6UX52 265 aa7.4□□□□□ -1.22
HDAC8-212ENST00000421523 ASB2Q96Q27 587 aa7.4□□□□□ -1.22
HDAC8-212ENST00000421523 P2RX7Q99572 595 aaKnown RBP7.4□□□□□ -1.22
HDAC8-212ENST00000421523 C11orf49Q9H6J7 331 aa7.4□□□□□ -1.22
HDAC8-212ENST00000421523 PODXL2Q9NZ53 605 aa7.4□□□□□ -1.22
HDAC8-212ENST00000421523 PCDHAC2Q9Y5I4 1007 aa7.4□□□□□ -1.22
HDAC8-212ENST00000421523 PPP2R3BQ9Y5P8 575 aa7.4□□□□□ -1.22
HDAC8-212ENST00000421523 MYO3BQ8WXR4 1341 aa7.4□□□□□ -1.22
HDAC8-212ENST00000421523 ZNF804BA4D1E1 1349 aa7.39□□□□□ -1.23
HDAC8-212ENST00000421523 ANXA1P04083 346 aa7.39□□□□□ -1.23
HDAC8-212ENST00000421523 CETPP11597 493 aa7.39□□□□□ -1.23
HDAC8-212ENST00000421523 FLT3LGP49771 235 aa7.39□□□□□ -1.23
HDAC8-212ENST00000421523 FCGRTP55899 365 aa7.39□□□□□ -1.23
HDAC8-212ENST00000421523 RPS8P62241 208 aaKnown RBP7.39□□□□□ -1.23
HDAC8-212ENST00000421523 DLGAP5Q15398 846 aa7.39□□□□□ -1.23
HDAC8-212ENST00000421523 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.39□□□□□ -1.23
HDAC8-212ENST00000421523 LRP10Q7Z4F1 713 aa7.39□□□□□ -1.23
HDAC8-212ENST00000421523 HELBQ8NG08 1087 aaPredicted RBP7.39□□□□□ -1.23
HDAC8-212ENST00000421523 RTF1Q92541 710 aaKnown RBP7.39□□□□□ -1.23
HDAC8-212ENST00000421523 ZBED3Q96IU2 234 aaPredicted RBP7.39□□□□□ -1.23
HDAC8-212ENST00000421523 LBHD1Q9BQE6 289 aaPredicted RBP7.39□□□□□ -1.23
HDAC8-212ENST00000421523 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.39□□□□□ -1.23
HDAC8-212ENST00000421523 THEGQ9P2T0 379 aa7.39□□□□□ -1.23
HDAC8-212ENST00000421523 CSADQ9Y600 493 aa7.39□□□□□ -1.23
HDAC8-212ENST00000421523 PFASO15067 1338 aa7.38□□□□□ -1.23
HDAC8-212ENST00000421523 AOX1Q06278 1338 aa7.38□□□□□ -1.23
HDAC8-212ENST00000421523 EIF4A1P60842 406 aaKnown RBP7.38□□□□□ -1.23
HDAC8-212ENST00000421523 RASA3Q14644 834 aa7.38□□□□□ -1.23
HDAC8-212ENST00000421523 CDAN1Q8IWY9 1227 aa7.38□□□□□ -1.23
HDAC8-212ENST00000421523 ANKLE1Q8NAG6 615 aa7.38□□□□□ -1.23
HDAC8-212ENST00000421523 ATXN2LQ8WWM7 1075 aaKnown RBP7.38□□□□□ -1.23
HDAC8-212ENST00000421523 FAM89AQ96GI7 184 aa7.38□□□□□ -1.23
HDAC8-212ENST00000421523 SEC31BQ9NQW1 1179 aa7.38□□□□□ -1.23
HDAC8-212ENST00000421523 MGAMO43451 1857 aa7.38□□□□□ -1.23
HDAC8-212ENST00000421523 ECM29Q5VYK3 1845 aa7.38□□□□□ -1.23
HDAC8-212ENST00000421523 CHD7Q9P2D1 2997 aa7.37□□□□□ -1.23
HDAC8-212ENST00000421523 XDHP47989 1333 aa7.37□□□□□ -1.23
HDAC8-212ENST00000421523 FAM86C2PA6NEL3 165 aa7.37□□□□□ -1.23
HDAC8-212ENST00000421523 F8W031 263 aaPredicted RBP7.37□□□□□ -1.23
HDAC8-212ENST00000421523 MYO1BO43795 1136 aa7.37□□□□□ -1.23
HDAC8-212ENST00000421523 AIMP1Q12904 312 aaKnown RBP7.37□□□□□ -1.23
HDAC8-212ENST00000421523 SNAPC2Q13487 334 aa7.37□□□□□ -1.23
HDAC8-212ENST00000421523 SF3B3Q15393 1217 aaKnown RBP7.37□□□□□ -1.23
HDAC8-212ENST00000421523 LRRC26Q2I0M4 334 aa7.37□□□□□ -1.23
HDAC8-212ENST00000421523 PROSER3Q2NL68 480 aa7.37□□□□□ -1.23
HDAC8-212ENST00000421523 HSP90AB3PQ58FF7 597 aa7.37□□□□□ -1.23
HDAC8-212ENST00000421523 TMEM31Q5JXX7 168 aa7.37□□□□□ -1.23
HDAC8-212ENST00000421523 STRIP1Q5VSL9 837 aa7.37□□□□□ -1.23
HDAC8-212ENST00000421523 ZBTB38Q8NAP3 1195 aaPredicted RBP7.37□□□□□ -1.23
HDAC8-212ENST00000421523 EPHX3Q9H6B9 360 aa7.37□□□□□ -1.23
HDAC8-212ENST00000421523 ZCCHC17Q9NP64 241 aaKnown RBP7.37□□□□□ -1.23
HDAC8-212ENST00000421523 SPDYE5A6NIY4 337 aa7.36□□□□□ -1.23
HDAC8-212ENST00000421523 PDHXO00330 501 aa7.36□□□□□ -1.23
HDAC8-212ENST00000421523 IRF6O14896 467 aa7.36□□□□□ -1.23
HDAC8-212ENST00000421523 CAPN2P17655 700 aa7.36□□□□□ -1.23
HDAC8-212ENST00000421523 MAP3K9P80192 1104 aa7.36□□□□□ -1.23
HDAC8-212ENST00000421523 MRPS5P82675 430 aaKnown RBP7.36□□□□□ -1.23
HDAC8-212ENST00000421523 GRIN2CQ14957 1233 aa7.36□□□□□ -1.23
HDAC8-212ENST00000421523 PDIA6Q15084 440 aa7.36□□□□□ -1.23
HDAC8-212ENST00000421523 SHHQ15465 462 aa7.36□□□□□ -1.23
HDAC8-212ENST00000421523 NFE2L2Q16236 605 aa7.36□□□□□ -1.23
HDAC8-212ENST00000421523 C9orf50Q5SZB4 431 aa7.36□□□□□ -1.23
HDAC8-212ENST00000421523 PNISRQ8TF01 805 aaKnown RBP7.36□□□□□ -1.23
HDAC8-212ENST00000421523 CCDC85AQ96PX6 553 aaPredicted RBP7.36□□□□□ -1.23
HDAC8-212ENST00000421523 TCF20Q9UGU0 1960 aaKnown RBP7.36□□□□□ -1.23
HDAC8-212ENST00000421523 MED23Q9ULK4 1368 aa7.35□□□□□ -1.23
HDAC8-212ENST00000421523 TNPO2O14787 897 aaKnown RBP7.35□□□□□ -1.23
HDAC8-212ENST00000421523 CYP2C8P10632 490 aa7.35□□□□□ -1.23
HDAC8-212ENST00000421523 EIF2S2P20042 333 aaKnown RBP7.35□□□□□ -1.23
HDAC8-212ENST00000421523 ATP2B4P23634 1241 aa7.35□□□□□ -1.23
HDAC8-212ENST00000421523 GTF2IP78347 998 aa7.35□□□□□ -1.23
HDAC8-212ENST00000421523 CCDC85BQ15834 202 aaPredicted RBP7.35□□□□□ -1.23
HDAC8-212ENST00000421523 CFAP100Q494V2 611 aa7.35□□□□□ -1.23
HDAC8-212ENST00000421523 TTLL5Q6EMB2 1281 aa7.35□□□□□ -1.23
HDAC8-212ENST00000421523 POTEEQ6S8J3 1075 aa7.35□□□□□ -1.23
HDAC8-212ENST00000421523 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.35□□□□□ -1.23
HDAC8-212ENST00000421523 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.35□□□□□ -1.23
HDAC8-212ENST00000421523 SNCAIPQ9Y6H5 919 aa7.35□□□□□ -1.23
HDAC8-212ENST00000421523 CACNA1GO43497 2377 aa7.35□□□□□ -1.23
HDAC8-212ENST00000421523 SPDYE2BA6NHP3 402 aa7.34□□□□□ -1.23
HDAC8-212ENST00000421523 ATP5J2-PTCD1G3V325 749 aa7.34□□□□□ -1.23
HDAC8-212ENST00000421523 IRS4O14654 1257 aaPredicted RBP7.34□□□□□ -1.23
HDAC8-212ENST00000421523 SPDYE6P0CI01 402 aa7.34□□□□□ -1.23
HDAC8-212ENST00000421523 RBM5P52756 815 aaKnown RBP eCLIP7.34□□□□□ -1.23
HDAC8-212ENST00000421523 SMAD3P84022 425 aaKnown RBP7.34□□□□□ -1.23
HDAC8-212ENST00000421523 TRIM32Q13049 653 aa7.34□□□□□ -1.23
HDAC8-212ENST00000421523 COPS6Q7L5N1 327 aa7.34□□□□□ -1.23
HDAC8-212ENST00000421523 PXYLP1Q8TE99 480 aa7.34□□□□□ -1.23
HDAC8-212ENST00000421523 XAGE3Q8WTP9 111 aa7.34□□□□□ -1.23
HDAC8-212ENST00000421523 ZKSCAN4Q969J2 545 aaPredicted RBP7.34□□□□□ -1.23
HDAC8-212ENST00000421523 PRMT6Q96LA8 375 aaPredicted RBP7.34□□□□□ -1.23
HDAC8-212ENST00000421523 BABAM1Q9NWV8 329 aa7.34□□□□□ -1.23
HDAC8-212ENST00000421523 ZDBF2Q9HCK1 2354 aa7.34□□□□□ -1.23
HDAC8-212ENST00000421523 SPEF2Q9C093 1822 aa7.34□□□□□ -1.24
HDAC8-212ENST00000421523 BCRP11274 1271 aa7.33□□□□□ -1.24
HDAC8-212ENST00000421523 KLRK1P26718 216 aa7.33□□□□□ -1.24
HDAC8-212ENST00000421523 TMPOP42166 694 aaKnown RBP7.33□□□□□ -1.24
HDAC8-212ENST00000421523 MMP14P50281 582 aa7.33□□□□□ -1.24
HDAC8-212ENST00000421523 PPIL2Q13356 520 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms