RNA–Protein interactions for RNA: ENST00000420995.6

TRIM13-204, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-204ENST00000420995 AIFM3Q96NN9 605 aa18.42■□□□□ 0.54
TRIM13-204ENST00000420995 CCDC85AQ96PX6 553 aaPredicted RBP18.42■□□□□ 0.54
TRIM13-204ENST00000420995 PUS7LQ9H0K6 701 aaKnown RBP18.42■□□□□ 0.54
TRIM13-204ENST00000420995 TMEM94Q12767 1356 aa18.42■□□□□ 0.54
TRIM13-204ENST00000420995 KIF23Q02241 960 aaPredicted RBP18.42■□□□□ 0.54
TRIM13-204ENST00000420995 ANO1Q5XXA6 986 aa18.42■□□□□ 0.54
TRIM13-204ENST00000420995 KRT222Q8N1A0 295 aa18.42■□□□□ 0.54
TRIM13-204ENST00000420995 GLI3P10071 1580 aa18.42■□□□□ 0.54
TRIM13-204ENST00000420995 GABPB1Q06547 395 aaPredicted RBP18.41■□□□□ 0.54
TRIM13-204ENST00000420995 GORABQ5T7V8 394 aa18.41■□□□□ 0.54
TRIM13-204ENST00000420995 BRAPQ7Z569 592 aa18.41■□□□□ 0.54
TRIM13-204ENST00000420995 CHMP4CQ96CF2 233 aa18.41■□□□□ 0.54
TRIM13-204ENST00000420995 DENND2AQ9ULE3 1009 aa18.41■□□□□ 0.54
TRIM13-204ENST00000420995 MST1RQ04912 1400 aa18.41■□□□□ 0.54
TRIM13-204ENST00000420995 KIF2AO00139 706 aaPredicted RBP18.41■□□□□ 0.54
TRIM13-204ENST00000420995 DHX16O60231 1041 aaKnown RBP18.41■□□□□ 0.54
TRIM13-204ENST00000420995 ERCC6LQ2NKX8 1250 aa18.41■□□□□ 0.54
TRIM13-204ENST00000420995 TTC39AQ5SRH9 613 aa18.41■□□□□ 0.54
TRIM13-204ENST00000420995 CEP126Q9P2H0 1117 aa18.41■□□□□ 0.54
TRIM13-204ENST00000420995 KIF1AQ12756 1690 aa18.41■□□□□ 0.54
TRIM13-204ENST00000420995 SLFN14P0C7P3 912 aa18.4■□□□□ 0.54
TRIM13-204ENST00000420995 HSD3B7Q9H2F3 369 aa18.4■□□□□ 0.54
TRIM13-204ENST00000420995 L2HGDHQ9H9P8 463 aa18.4■□□□□ 0.54
TRIM13-204ENST00000420995 ZNF446Q9NWS9 450 aa18.4■□□□□ 0.54
TRIM13-204ENST00000420995 NWD2Q9ULI1 1742 aa18.4■□□□□ 0.54
TRIM13-204ENST00000420995 ATF3P18847 181 aa18.4■□□□□ 0.54
TRIM13-204ENST00000420995 FANCCQ00597 558 aa18.4■□□□□ 0.54
TRIM13-204ENST00000420995 PTPN21Q16825 1174 aa18.4■□□□□ 0.54
TRIM13-204ENST00000420995 RALYLQ86SE5 291 aaKnown RBP18.4■□□□□ 0.54
TRIM13-204ENST00000420995 NKX2-3Q8TAU0 364 aa18.4■□□□□ 0.54
TRIM13-204ENST00000420995 XAGE2Q96GT9 111 aa18.4■□□□□ 0.54
TRIM13-204ENST00000420995 ST7Q9NRC1 585 aa18.4■□□□□ 0.54
TRIM13-204ENST00000420995 RXRAP19793 462 aa18.39■□□□□ 0.54
TRIM13-204ENST00000420995 ZAP70P43403 619 aa18.39■□□□□ 0.54
TRIM13-204ENST00000420995 CIAO1O76071 339 aa18.39■□□□□ 0.53
TRIM13-204ENST00000420995 CMA1P23946 247 aa18.39■□□□□ 0.53
TRIM13-204ENST00000420995 TPM4P67936 248 aa18.39■□□□□ 0.53
TRIM13-204ENST00000420995 CCDC158Q5M9N0 1113 aa18.39■□□□□ 0.53
TRIM13-204ENST00000420995 TICAM2Q86XR7 235 aa18.39■□□□□ 0.53
TRIM13-204ENST00000420995 NCOA7Q8NI08 942 aa18.39■□□□□ 0.53
TRIM13-204ENST00000420995 PSDA5PKW4 1024 aaPredicted RBP18.38■□□□□ 0.53
TRIM13-204ENST00000420995 DPF2Q92785 391 aa18.38■□□□□ 0.53
TRIM13-204ENST00000420995 CCDC191Q8NCU4 936 aa18.38■□□□□ 0.53
TRIM13-204ENST00000420995 TJP1Q07157 1748 aa18.38■□□□□ 0.53
TRIM13-204ENST00000420995 GOLGA8FQ08AF8 430 aa18.37■□□□□ 0.53
TRIM13-204ENST00000420995 GOLGA8DPQ0D2H9 430 aa18.37■□□□□ 0.53
TRIM13-204ENST00000420995 HOMER1Q86YM7 354 aa18.37■□□□□ 0.53
TRIM13-204ENST00000420995 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.37■□□□□ 0.53
TRIM13-204ENST00000420995 ZNF213O14771 459 aa18.37■□□□□ 0.53
TRIM13-204ENST00000420995 GPAA1O43292 621 aa18.37■□□□□ 0.53
TRIM13-204ENST00000420995 SYKP43405 635 aa18.37■□□□□ 0.53
TRIM13-204ENST00000420995 SLC39A14Q15043 492 aa18.37■□□□□ 0.53
TRIM13-204ENST00000420995 TERF2Q15554 542 aa18.37■□□□□ 0.53
TRIM13-204ENST00000420995 CCDC57Q2TAC2 916 aa18.37■□□□□ 0.53
TRIM13-204ENST00000420995 CCDC93Q567U6 631 aa18.37■□□□□ 0.53
TRIM13-204ENST00000420995 VPS37DQ86XT2 251 aa18.37■□□□□ 0.53
TRIM13-204ENST00000420995 APPBP2Q92624 585 aa18.37■□□□□ 0.53
TRIM13-204ENST00000420995 PNOCQ13519 176 aa18.36■□□□□ 0.53
TRIM13-204ENST00000420995 NBPF3Q9H094 633 aa18.36■□□□□ 0.53
TRIM13-204ENST00000420995 FAM53CQ9NYF3 392 aa18.36■□□□□ 0.53
TRIM13-204ENST00000420995 COL18A1P39060 1754 aa18.36■□□□□ 0.53
TRIM13-204ENST00000420995 SHC4Q6S5L8 630 aa18.36■□□□□ 0.53
TRIM13-204ENST00000420995 DNAI1Q9UI46 699 aa18.36■□□□□ 0.53
TRIM13-204ENST00000420995 ZNF330Q9Y3S2 320 aaPredicted RBP18.36■□□□□ 0.53
TRIM13-204ENST00000420995 IKBKBO14920 756 aa18.36■□□□□ 0.53
TRIM13-204ENST00000420995 ZFYP08048 801 aaPredicted RBP18.36■□□□□ 0.53
TRIM13-204ENST00000420995 LRRFIP1Q32MZ4 808 aaKnown RBP18.36■□□□□ 0.53
TRIM13-204ENST00000420995 PHKBQ93100 1093 aa18.36■□□□□ 0.53
TRIM13-204ENST00000420995 CLIC6Q96NY7 704 aa18.36■□□□□ 0.53
TRIM13-204ENST00000420995 ALG1Q9BT22 464 aa18.36■□□□□ 0.53
TRIM13-204ENST00000420995 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.36■□□□□ 0.53
TRIM13-204ENST00000420995 FANCGO15287 622 aa18.35■□□□□ 0.53
TRIM13-204ENST00000420995 NRDCO43847 1150 aa18.35■□□□□ 0.53
TRIM13-204ENST00000420995 H2AFXP16104 143 aaPredicted RBP18.35■□□□□ 0.53
TRIM13-204ENST00000420995 KCNJ6P48051 423 aa18.35■□□□□ 0.53
TRIM13-204ENST00000420995 UBASH3AP57075 661 aa18.35■□□□□ 0.53
TRIM13-204ENST00000420995 SENP2Q9HC62 589 aa18.35■□□□□ 0.53
TRIM13-204ENST00000420995 ATG3Q9NT62 314 aa18.35■□□□□ 0.53
TRIM13-204ENST00000420995 SERPINC1P01008 464 aa18.35■□□□□ 0.53
TRIM13-204ENST00000420995 HSPA2P54652 639 aa18.35■□□□□ 0.53
TRIM13-204ENST00000420995 CFAP100Q494V2 611 aa18.35■□□□□ 0.53
TRIM13-204ENST00000420995 LAMB4A4D0S4 1761 aa18.34■□□□□ 0.53
TRIM13-204ENST00000420995 SPEF2Q9C093 1822 aa18.34■□□□□ 0.53
TRIM13-204ENST00000420995 TMEM232C9JQI7 657 aa18.34■□□□□ 0.53
TRIM13-204ENST00000420995 ETF1P62495 437 aaKnown RBP18.34■□□□□ 0.53
TRIM13-204ENST00000420995 KRT40Q6A162 431 aa18.34■□□□□ 0.53
TRIM13-204ENST00000420995 TBC1D10CQ8IV04 446 aa18.34■□□□□ 0.53
TRIM13-204ENST00000420995 TUBE1Q9UJT0 475 aa18.34■□□□□ 0.53
TRIM13-204ENST00000420995 HPSEQ9Y251 543 aa18.34■□□□□ 0.53
TRIM13-204ENST00000420995 UBE2Q2LH0YL09 131 aa18.34■□□□□ 0.53
TRIM13-204ENST00000420995 METAP2P50579 478 aaKnown RBP eCLIP18.34■□□□□ 0.53
TRIM13-204ENST00000420995 MYL5Q02045 173 aa18.34■□□□□ 0.53
TRIM13-204ENST00000420995 ARHGAP29Q52LW3 1261 aa18.34■□□□□ 0.53
TRIM13-204ENST00000420995 CYB5R4Q7L1T6 521 aa18.34■□□□□ 0.53
TRIM13-204ENST00000420995 MICU3Q86XE3 530 aa18.34■□□□□ 0.53
TRIM13-204ENST00000420995 CPDO75976 1380 aa18.34■□□□□ 0.53
TRIM13-204ENST00000420995 ZMYM6O95789 1325 aa18.33■□□□□ 0.53
TRIM13-204ENST00000420995 CDC27P30260 824 aa18.33■□□□□ 0.53
TRIM13-204ENST00000420995 CLCN6P51797 869 aa18.33■□□□□ 0.53
TRIM13-204ENST00000420995 GNL2Q13823 731 aaKnown RBP18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms