RNA–Protein interactions for RNA: ENST00000420330.1

AC009404.1-201, humanhuman

TSL 3 BASIC

Gene AC009404.1, Length 3,090 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009404.1-201ENST00000420330 SRLQ86TD4 932 aa7.57□□□□□ -1.2
AC009404.1-201ENST00000420330 GPC2Q8N158 579 aa7.57□□□□□ -1.2
AC009404.1-201ENST00000420330 RAI14Q9P0K7 980 aa7.57□□□□□ -1.2
AC009404.1-201ENST00000420330 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.57□□□□□ -1.2
AC009404.1-201ENST00000420330 ATP6V0A2Q9Y487 856 aa7.57□□□□□ -1.2
AC009404.1-201ENST00000420330 V9GYY5 206 aaPredicted RBP7.57□□□□□ -1.2
AC009404.1-201ENST00000420330 CLSTN1O94985 981 aa7.56□□□□□ -1.2
AC009404.1-201ENST00000420330 PTGS1P23219 599 aa7.56□□□□□ -1.2
AC009404.1-201ENST00000420330 EIF6P56537 245 aaKnown RBP7.56□□□□□ -1.2
AC009404.1-201ENST00000420330 TRIM28Q13263 835 aaKnown RBP7.56□□□□□ -1.2
AC009404.1-201ENST00000420330 ELF2Q15723 593 aa7.56□□□□□ -1.2
AC009404.1-201ENST00000420330 CCDC27Q2M243 656 aa7.56□□□□□ -1.2
AC009404.1-201ENST00000420330 ANKRD13DQ6ZTN6 518 aa7.56□□□□□ -1.2
AC009404.1-201ENST00000420330 JMYQ8N9B5 988 aa7.56□□□□□ -1.2
AC009404.1-201ENST00000420330 GTF3C6Q969F1 213 aa7.56□□□□□ -1.2
AC009404.1-201ENST00000420330 SMARCE1Q969G3 411 aa7.56□□□□□ -1.2
AC009404.1-201ENST00000420330 ISCA1Q9BUE6 129 aa7.56□□□□□ -1.2
AC009404.1-201ENST00000420330 TRMT112Q9UI30 125 aaKnown RBP7.56□□□□□ -1.2
AC009404.1-201ENST00000420330 HACL1Q9UJ83 578 aa7.56□□□□□ -1.2
AC009404.1-201ENST00000420330 JRKLQ9Y4A0 524 aa7.56□□□□□ -1.2
AC009404.1-201ENST00000420330 ABCC4O15439 1325 aa7.56□□□□□ -1.2
AC009404.1-201ENST00000420330 ZNF541Q9H0D2 1346 aa7.56□□□□□ -1.2
AC009404.1-201ENST00000420330 ZRANB2O95218 330 aaKnown RBP eCLIP7.56□□□□□ -1.2
AC009404.1-201ENST00000420330 GSPT1P15170 499 aaKnown RBP7.56□□□□□ -1.2
AC009404.1-201ENST00000420330 SART3Q15020 963 aaKnown RBP7.56□□□□□ -1.2
AC009404.1-201ENST00000420330 KRT24Q2M2I5 525 aa7.56□□□□□ -1.2
AC009404.1-201ENST00000420330 PNMA8AQ86V59 439 aaPredicted RBP7.56□□□□□ -1.2
AC009404.1-201ENST00000420330 DZIP1LQ8IYY4 767 aaKnown RBP7.56□□□□□ -1.2
AC009404.1-201ENST00000420330 NECTIN2Q92692 538 aa7.56□□□□□ -1.2
AC009404.1-201ENST00000420330 RTFDC1Q9BY42 306 aaPredicted RBP7.56□□□□□ -1.2
AC009404.1-201ENST00000420330 TAF1DQ9H5J8 278 aaPredicted RBP7.56□□□□□ -1.2
AC009404.1-201ENST00000420330 TOMM22Q9NS69 142 aa7.56□□□□□ -1.2
AC009404.1-201ENST00000420330 ADAMTSL1Q8N6G6 1762 aa7.56□□□□□ -1.2
AC009404.1-201ENST00000420330 TNNT1P13805 278 aa7.55□□□□□ -1.2
AC009404.1-201ENST00000420330 ATP2B1P20020 1258 aa7.55□□□□□ -1.2
AC009404.1-201ENST00000420330 GRAPQ13588 217 aa7.55□□□□□ -1.2
AC009404.1-201ENST00000420330 KRBA2Q6ZNG9 492 aa7.55□□□□□ -1.2
AC009404.1-201ENST00000420330 DDX46Q7L014 1031 aaKnown RBP7.55□□□□□ -1.2
AC009404.1-201ENST00000420330 REXO1L1PQ8IX06 675 aa7.55□□□□□ -1.2
AC009404.1-201ENST00000420330 SP8Q8IXZ3 490 aa7.55□□□□□ -1.2
AC009404.1-201ENST00000420330 GRAPLQ8TC17 118 aaPredicted RBP7.55□□□□□ -1.2
AC009404.1-201ENST00000420330 LRRC37AA6NMS7 1700 aa7.55□□□□□ -1.2
AC009404.1-201ENST00000420330 DDX60Q8IY21 1712 aaKnown RBP7.55□□□□□ -1.2
AC009404.1-201ENST00000420330 PNMA6AP0CW24 399 aaPredicted RBP7.55□□□□□ -1.2
AC009404.1-201ENST00000420330 OLFM4Q6UX06 510 aa7.55□□□□□ -1.2
AC009404.1-201ENST00000420330 C3orf67Q6ZVT6 689 aa7.55□□□□□ -1.2
AC009404.1-201ENST00000420330 NIM1KQ8IY84 436 aa7.55□□□□□ -1.2
AC009404.1-201ENST00000420330 LRRN4CLQ8ND94 238 aa7.55□□□□□ -1.2
AC009404.1-201ENST00000420330 CCDC112Q8NEF3 446 aa7.55□□□□□ -1.2
AC009404.1-201ENST00000420330 RNF217Q8TC41 542 aa7.55□□□□□ -1.2
AC009404.1-201ENST00000420330 PAXBP1Q9Y5B6 917 aa7.55□□□□□ -1.2
AC009404.1-201ENST00000420330 IL16Q14005 1332 aa7.55□□□□□ -1.2
AC009404.1-201ENST00000420330 MAP2K1Q02750 393 aaPredicted RBP7.55□□□□□ -1.2
AC009404.1-201ENST00000420330 SEMA3FQ13275 785 aa7.55□□□□□ -1.2
AC009404.1-201ENST00000420330 FOXD4L5Q5VV16 416 aaPredicted RBP7.55□□□□□ -1.2
AC009404.1-201ENST00000420330 LARGE2Q8N3Y3 721 aa7.55□□□□□ -1.2
AC009404.1-201ENST00000420330 SPC24Q8NBT2 197 aa7.55□□□□□ -1.2
AC009404.1-201ENST00000420330 FOXD4L4Q8WXT5 416 aaPredicted RBP7.55□□□□□ -1.2
AC009404.1-201ENST00000420330 GDPD2Q9HCC8 539 aa7.55□□□□□ -1.2
AC009404.1-201ENST00000420330 RPAP1Q9BWH6 1393 aaPredicted RBP7.54□□□□□ -1.2
AC009404.1-201ENST00000420330 DDX58O95786 925 aaKnown RBP7.54□□□□□ -1.2
AC009404.1-201ENST00000420330 LMOD1P29536 600 aaPredicted RBP7.54□□□□□ -1.2
AC009404.1-201ENST00000420330 SF3B3Q15393 1217 aaKnown RBP7.54□□□□□ -1.2
AC009404.1-201ENST00000420330 CCDC30Q5VVM6 783 aa7.54□□□□□ -1.2
AC009404.1-201ENST00000420330 ZKSCAN2Q63HK3 967 aa7.54□□□□□ -1.2
AC009404.1-201ENST00000420330 NYAP1Q6ZVC0 841 aa7.54□□□□□ -1.2
AC009404.1-201ENST00000420330 TMEM87AQ8NBN3 555 aa7.54□□□□□ -1.2
AC009404.1-201ENST00000420330 CREBZFQ9NS37 354 aa7.54□□□□□ -1.2
AC009404.1-201ENST00000420330 CDHR2Q9BYE9 1310 aa7.54□□□□□ -1.2
AC009404.1-201ENST00000420330 USP27XA6NNY8 438 aa7.54□□□□□ -1.2
AC009404.1-201ENST00000420330 GOLIM4O00461 696 aa7.54□□□□□ -1.2
AC009404.1-201ENST00000420330 KIF1CO43896 1103 aaKnown RBP7.54□□□□□ -1.2
AC009404.1-201ENST00000420330 EPHX2P34913 555 aa7.54□□□□□ -1.2
AC009404.1-201ENST00000420330 IQUBQ8NA54 791 aa7.54□□□□□ -1.2
AC009404.1-201ENST00000420330 DRC1Q96MC2 740 aa7.54□□□□□ -1.2
AC009404.1-201ENST00000420330 CXorf56Q9H5V9 222 aa7.54□□□□□ -1.2
AC009404.1-201ENST00000420330 PPIP5K2O43314 1243 aa7.53□□□□□ -1.2
AC009404.1-201ENST00000420330 TPM3P06753 285 aa7.53□□□□□ -1.2
AC009404.1-201ENST00000420330 ZSCAN26Q16670 478 aa7.53□□□□□ -1.2
AC009404.1-201ENST00000420330 SWT1Q5T5J6 900 aaKnown RBP7.53□□□□□ -1.2
AC009404.1-201ENST00000420330 DPP8Q6V1X1 898 aaPredicted RBP7.53□□□□□ -1.2
AC009404.1-201ENST00000420330 RIC3Q7Z5B4 369 aa7.53□□□□□ -1.2
AC009404.1-201ENST00000420330 USP48Q86UV5 1035 aa7.53□□□□□ -1.2
AC009404.1-201ENST00000420330 ZNF592Q92610 1267 aa7.53□□□□□ -1.2
AC009404.1-201ENST00000420330 SGSM3Q96HU1 749 aa7.53□□□□□ -1.2
AC009404.1-201ENST00000420330 NRBP1Q9UHY1 535 aa7.53□□□□□ -1.2
AC009404.1-201ENST00000420330 RRP15Q9Y3B9 282 aaKnown RBP7.53□□□□□ -1.2
AC009404.1-201ENST00000420330 COL4A5P29400 1685 aa7.53□□□□□ -1.2
AC009404.1-201ENST00000420330 PASKQ96RG2 1323 aa7.53□□□□□ -1.2
AC009404.1-201ENST00000420330 TXLNBQ8N3L3 684 aa7.53□□□□□ -1.2
AC009404.1-201ENST00000420330 GPATCH11Q8N954 259 aa7.53□□□□□ -1.2
AC009404.1-201ENST00000420330 CCDC183Q5T5S1 534 aa7.53□□□□□ -1.2
AC009404.1-201ENST00000420330 CCDC191Q8NCU4 936 aa7.53□□□□□ -1.2
AC009404.1-201ENST00000420330 ERO1AQ96HE7 468 aa7.53□□□□□ -1.2
AC009404.1-201ENST00000420330 MED4Q9NPJ6 270 aa7.53□□□□□ -1.2
AC009404.1-201ENST00000420330 TAOK2Q9UL54 1235 aa7.53□□□□□ -1.2
AC009404.1-201ENST00000420330 ZNRF3Q9ULT6 936 aa7.53□□□□□ -1.2
AC009404.1-201ENST00000420330 LRRFIP2Q9Y608 721 aaKnown RBP7.53□□□□□ -1.2
AC009404.1-201ENST00000420330 MX1P20591 662 aa7.52□□□□□ -1.21
AC009404.1-201ENST00000420330 CUL4AQ13619 759 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms