RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 USPL1Q5W0Q7 1092 aa7.52□□□□□ -1.21
ECHDC1-206ENST00000417628 PRPF40BQ6NWY9 871 aaKnown RBP7.52□□□□□ -1.21
ECHDC1-206ENST00000417628 ANKMY2Q8IV38 441 aa7.52□□□□□ -1.21
ECHDC1-206ENST00000417628 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.52□□□□□ -1.215e-7■■■□□ 18.9
ECHDC1-206ENST00000417628 OGFOD1Q8N543 542 aa7.52□□□□□ -1.21
ECHDC1-206ENST00000417628 USHBP1Q8N6Y0 703 aa7.52□□□□□ -1.21
ECHDC1-206ENST00000417628 CNKSR1Q969H4 720 aa7.52□□□□□ -1.21
ECHDC1-206ENST00000417628 SLC4A9Q96Q91 983 aa7.52□□□□□ -1.21
ECHDC1-206ENST00000417628 DOLKQ9UPQ8 538 aa7.52□□□□□ -1.21
ECHDC1-206ENST00000417628 GJA3Q9Y6H8 435 aa7.52□□□□□ -1.21
ECHDC1-206ENST00000417628 IVNS1ABPQ9Y6Y0 642 aa7.52□□□□□ -1.21
ECHDC1-206ENST00000417628 RGPD2P0DJD1 1756 aa7.51□□□□□ -1.21
ECHDC1-206ENST00000417628 ESPNB1AK53 854 aa7.51□□□□□ -1.21
ECHDC1-206ENST00000417628 ZBTB7BO15156 539 aaPredicted RBP7.51□□□□□ -1.21
ECHDC1-206ENST00000417628 NME9Q86XW9 330 aa7.51□□□□□ -1.21
ECHDC1-206ENST00000417628 MON2Q7Z3U7 1717 aa7.51□□□□□ -1.21
ECHDC1-206ENST00000417628 MKI67P46013 3256 aaKnown RBP7.51□□□□□ -1.21
ECHDC1-206ENST00000417628 CENPJQ9HC77 1338 aaPredicted RBP7.51□□□□□ -1.21
ECHDC1-206ENST00000417628 GPR25O00155 361 aa7.5□□□□□ -1.21
ECHDC1-206ENST00000417628 TBC1D8O95759 1140 aa7.5□□□□□ -1.21
ECHDC1-206ENST00000417628 HOXC9P31274 260 aa7.5□□□□□ -1.21
ECHDC1-206ENST00000417628 IARSP41252 1262 aaKnown RBP7.5□□□□□ -1.21
ECHDC1-206ENST00000417628 CRKLP46109 303 aaKnown RBP7.5□□□□□ -1.21
ECHDC1-206ENST00000417628 MFAP1P55081 439 aaKnown RBP7.5□□□□□ -1.21
ECHDC1-206ENST00000417628 EIF6P56537 245 aaKnown RBP7.5□□□□□ -1.21
ECHDC1-206ENST00000417628 PLA2G2CQ5R387 149 aa7.5□□□□□ -1.21
ECHDC1-206ENST00000417628 NBPF6Q5VWK0 638 aa7.5□□□□□ -1.21
ECHDC1-206ENST00000417628 Q7L0L9 218 aa7.5□□□□□ -1.21
ECHDC1-206ENST00000417628 NPM2Q86SE8 214 aaKnown RBP7.5□□□□□ -1.21
ECHDC1-206ENST00000417628 TRMT44Q8IYL2 757 aaKnown RBP7.5□□□□□ -1.21
ECHDC1-206ENST00000417628 RGS22Q8NE09 1264 aa7.5□□□□□ -1.21
ECHDC1-206ENST00000417628 FAM200AQ8TCP9 573 aa7.5□□□□□ -1.21
ECHDC1-206ENST00000417628 SLC10A4Q96EP9 437 aa7.5□□□□□ -1.21
ECHDC1-206ENST00000417628 NBPF4Q96M43 638 aa7.5□□□□□ -1.21
ECHDC1-206ENST00000417628 ADARB2Q9NS39 739 aaKnown RBP7.5□□□□□ -1.21
ECHDC1-206ENST00000417628 MTMR10Q9NXD2 777 aa7.5□□□□□ -1.21
ECHDC1-206ENST00000417628 KIAA1024Q9UPX6 916 aa7.5□□□□□ -1.21
ECHDC1-206ENST00000417628 NOD1Q9Y239 953 aa7.5□□□□□ -1.21
ECHDC1-206ENST00000417628 ARFGEF2Q9Y6D5 1785 aa7.5□□□□□ -1.21
ECHDC1-206ENST00000417628 RNF223E7ERA6 249 aa7.49□□□□□ -1.21
ECHDC1-206ENST00000417628 FKTNO75072 461 aa7.49□□□□□ -1.21
ECHDC1-206ENST00000417628 NEFLP07196 543 aa7.49□□□□□ -1.21
ECHDC1-206ENST00000417628 MAP3K12Q12852 859 aa7.49□□□□□ -1.21
ECHDC1-206ENST00000417628 DPYDQ12882 1025 aa7.49□□□□□ -1.21
ECHDC1-206ENST00000417628 MMRN1Q13201 1228 aa7.49□□□□□ -1.21
ECHDC1-206ENST00000417628 OXLD1Q5BKU9 147 aa7.49□□□□□ -1.21
ECHDC1-206ENST00000417628 STYK1Q6J9G0 422 aa7.49□□□□□ -1.21
ECHDC1-206ENST00000417628 CDC37L1Q7L3B6 337 aa7.49□□□□□ -1.21
ECHDC1-206ENST00000417628 TRIM50Q86XT4 487 aa7.49□□□□□ -1.21
ECHDC1-206ENST00000417628 JDP2Q8WYK2 163 aa7.49□□□□□ -1.21
ECHDC1-206ENST00000417628 CLP1Q92989 425 aaKnown RBP7.49□□□□□ -1.21
ECHDC1-206ENST00000417628 ARMC5Q96C12 935 aa7.49□□□□□ -1.21
ECHDC1-206ENST00000417628 ZNF594Q96JF6 807 aaPredicted RBP7.49□□□□□ -1.21
ECHDC1-206ENST00000417628 BRIP1Q9BX63 1249 aa7.49□□□□□ -1.21
ECHDC1-206ENST00000417628 DNAAF2Q9NVR5 837 aaKnown RBP7.49□□□□□ -1.21
ECHDC1-206ENST00000417628 GNEQ9Y223 722 aaKnown RBP7.49□□□□□ -1.21
ECHDC1-206ENST00000417628 RTL1A6NKG5 1358 aa7.48□□□□□ -1.21
ECHDC1-206ENST00000417628 AMPHP49418 695 aa7.48□□□□□ -1.21
ECHDC1-206ENST00000417628 SKOR1P84550 965 aa7.48□□□□□ -1.21
ECHDC1-206ENST00000417628 KCNC4Q03721 635 aa7.48□□□□□ -1.21
ECHDC1-206ENST00000417628 RNF20Q5VTR2 975 aa7.48□□□□□ -1.21
ECHDC1-206ENST00000417628 LARGE2Q8N3Y3 721 aa7.48□□□□□ -1.21
ECHDC1-206ENST00000417628 ANKRD31Q8N7Z5 1873 aa7.48□□□□□ -1.21
ECHDC1-206ENST00000417628 C2orf69Q8N8R5 385 aa7.48□□□□□ -1.21
ECHDC1-206ENST00000417628 DCAF11Q8TEB1 546 aa7.48□□□□□ -1.21
ECHDC1-206ENST00000417628 DPF3Q92784 378 aa7.48□□□□□ -1.21
ECHDC1-206ENST00000417628 GBA2Q9HCG7 927 aaPredicted RBP7.48□□□□□ -1.21
ECHDC1-206ENST00000417628 HCSTQ9UBK5 93 aa7.48□□□□□ -1.21
ECHDC1-206ENST00000417628 RPTORQ8N122 1335 aa7.48□□□□□ -1.21
ECHDC1-206ENST00000417628 SLX4Q8IY92 1834 aa7.48□□□□□ -1.21
ECHDC1-206ENST00000417628 CACNA1AO00555 2505 aa7.47□□□□□ -1.21
ECHDC1-206ENST00000417628 TNFRSF10AO00220 468 aa7.47□□□□□ -1.21
ECHDC1-206ENST00000417628 ATP1A2P50993 1020 aa7.47□□□□□ -1.21
ECHDC1-206ENST00000417628 GTF2IP78347 998 aa7.47□□□□□ -1.21
ECHDC1-206ENST00000417628 TRIM32Q13049 653 aa7.47□□□□□ -1.21
ECHDC1-206ENST00000417628 B4GALNT3Q6L9W6 998 aa7.47□□□□□ -1.21
ECHDC1-206ENST00000417628 RTKN2Q8IZC4 609 aa7.47□□□□□ -1.21
ECHDC1-206ENST00000417628 SIX5Q8N196 739 aa7.47□□□□□ -1.21
ECHDC1-206ENST00000417628 PGAP2Q9UHJ9 254 aa7.47□□□□□ -1.21
ECHDC1-206ENST00000417628 MTMR7Q9Y216 660 aa7.47□□□□□ -1.21
ECHDC1-206ENST00000417628 TRIM17Q9Y577 477 aa7.47□□□□□ -1.21
ECHDC1-206ENST00000417628 PCDHGA11Q9Y5H2 935 aa7.47□□□□□ -1.21
ECHDC1-206ENST00000417628 MYH14Q7Z406 1995 aaKnown RBP7.47□□□□□ -1.21
ECHDC1-206ENST00000417628 EVC2Q86UK5 1308 aa7.47□□□□□ -1.21
ECHDC1-206ENST00000417628 SBNO2Q9Y2G9 1366 aa7.46□□□□□ -1.21
ECHDC1-206ENST00000417628 NBPF20Q3BBV1 942 aa7.46□□□□□ -1.22
ECHDC1-206ENST00000417628 OTOP1Q7RTM1 612 aa7.46□□□□□ -1.22
ECHDC1-206ENST00000417628 ANKLE1Q8NAG6 615 aa7.46□□□□□ -1.22
ECHDC1-206ENST00000417628 C7orf43Q8WVR3 580 aa7.46□□□□□ -1.22
ECHDC1-206ENST00000417628 MASTLQ96GX5 879 aa7.46□□□□□ -1.22
ECHDC1-206ENST00000417628 MPHOSPH9Q99550 1183 aa7.46□□□□□ -1.22
ECHDC1-206ENST00000417628 GPRC5DQ9NZD1 345 aa7.46□□□□□ -1.22
ECHDC1-206ENST00000417628 PCDHB11Q9Y5F2 797 aa7.46□□□□□ -1.22
ECHDC1-206ENST00000417628 UNC80Q8N2C7 3258 aa7.46□□□□□ -1.22
ECHDC1-206ENST00000417628 CACNA1SQ13698 1873 aa7.45□□□□□ -1.22
ECHDC1-206ENST00000417628 ZBTB24O43167 697 aaPredicted RBP7.45□□□□□ -1.22
ECHDC1-206ENST00000417628 SRGNP10124 158 aa7.45□□□□□ -1.22
ECHDC1-206ENST00000417628 RASAL3Q86YV0 1011 aa7.45□□□□□ -1.22
ECHDC1-206ENST00000417628 KCTD15Q96SI1 283 aaPredicted RBP7.45□□□□□ -1.22
ECHDC1-206ENST00000417628 NARFQ9UHQ1 456 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms