RNA–Protein interactions for RNA: ENST00000417268.3

SCAF8-203, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 2 BASIC

Gene SCAF8, Length 4,944 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-203ENST00000417268 GBP3Q9H0R5 595 aa14.71□□□□□ -0.05
SCAF8-203ENST00000417268 PTPRUQ92729 1446 aa14.71□□□□□ -0.05
SCAF8-203ENST00000417268 NF2P35240 595 aa14.71□□□□□ -0.05
SCAF8-203ENST00000417268 CCDC186Q7Z3E2 898 aa14.71□□□□□ -0.05
SCAF8-203ENST00000417268 TEX11Q8IYF3 940 aa14.71□□□□□ -0.05
SCAF8-203ENST00000417268 TBC1D22AQ8WUA7 517 aa14.71□□□□□ -0.05
SCAF8-203ENST00000417268 TCEANC2Q96MN5 208 aa14.71□□□□□ -0.05
SCAF8-203ENST00000417268 CENPHQ9H3R5 247 aa14.71□□□□□ -0.05
SCAF8-203ENST00000417268 TNNI2P48788 182 aa14.71□□□□□ -0.05
SCAF8-203ENST00000417268 LRRC2Q9BYS8 371 aa14.71□□□□□ -0.05
SCAF8-203ENST00000417268 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.71□□□□□ -0.06
SCAF8-203ENST00000417268 LMOD1P29536 600 aaPredicted RBP14.71□□□□□ -0.06
SCAF8-203ENST00000417268 SNW1Q13573 536 aaKnown RBP14.71□□□□□ -0.06
SCAF8-203ENST00000417268 RTN1Q16799 776 aa14.71□□□□□ -0.06
SCAF8-203ENST00000417268 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.71□□□□□ -0.062e-7■□□□□ 8.4
SCAF8-203ENST00000417268 GOLGA6L10A6NI86 522 aa14.7□□□□□ -0.06
SCAF8-203ENST00000417268 ATP5JP18859 108 aa14.7□□□□□ -0.06
SCAF8-203ENST00000417268 GJD4Q96KN9 370 aaPredicted RBP14.7□□□□□ -0.06
SCAF8-203ENST00000417268 JAKMIP3Q5VZ66 844 aa14.7□□□□□ -0.06
SCAF8-203ENST00000417268 Q6ZUG5 572 aa14.7□□□□□ -0.06
SCAF8-203ENST00000417268 CRACR2AQ9BSW2 395 aa14.7□□□□□ -0.06
SCAF8-203ENST00000417268 COPRSQ9NQ92 184 aa14.7□□□□□ -0.06
SCAF8-203ENST00000417268 CLEC11AQ9Y240 323 aa14.7□□□□□ -0.06
SCAF8-203ENST00000417268 OVOS2A0A0G2JMS6 1433 aa14.7□□□□□ -0.06
SCAF8-203ENST00000417268 OVOS2A0A0J9YW53 1432 aa14.7□□□□□ -0.06
SCAF8-203ENST00000417268 EPB41L2O43491 1005 aaKnown RBP14.7□□□□□ -0.06
SCAF8-203ENST00000417268 WWC2Q6AWC2 1192 aa14.7□□□□□ -0.06
SCAF8-203ENST00000417268 OVOS2Q6IE36 1432 aa14.7□□□□□ -0.06
SCAF8-203ENST00000417268 PAXIP1Q6ZW49 1069 aaPredicted RBP14.7□□□□□ -0.06
SCAF8-203ENST00000417268 RAB11FIP4Q86YS3 637 aa14.7□□□□□ -0.06
SCAF8-203ENST00000417268 SPATA5Q8NB90 893 aa14.7□□□□□ -0.06
SCAF8-203ENST00000417268 CNKSR1Q969H4 720 aa14.7□□□□□ -0.06
SCAF8-203ENST00000417268 CALM1P0DP23 149 aa14.7□□□□□ -0.06
SCAF8-203ENST00000417268 CALM2P0DP24 149 aa14.7□□□□□ -0.06
SCAF8-203ENST00000417268 CALM3P0DP25 149 aa14.7□□□□□ -0.06
SCAF8-203ENST00000417268 LMAN1P49257 510 aa14.7□□□□□ -0.06
SCAF8-203ENST00000417268 USP48Q86UV5 1035 aa14.7□□□□□ -0.06
SCAF8-203ENST00000417268 CASQ1P31415 396 aa14.69□□□□□ -0.06
SCAF8-203ENST00000417268 GSDMDP57764 484 aa14.69□□□□□ -0.06
SCAF8-203ENST00000417268 TMEM266Q2M3C6 531 aa14.69□□□□□ -0.06
SCAF8-203ENST00000417268 CCDC181Q5TID7 509 aa14.69□□□□□ -0.06
SCAF8-203ENST00000417268 DIP2AQ14689 1571 aa14.69□□□□□ -0.06
SCAF8-203ENST00000417268 DHX32Q7L7V1 743 aaKnown RBP14.69□□□□□ -0.06
SCAF8-203ENST00000417268 PLCD4Q9BRC7 762 aa14.69□□□□□ -0.06
SCAF8-203ENST00000417268 RBSNQ9H1K0 784 aa14.69□□□□□ -0.06
SCAF8-203ENST00000417268 KDM2BQ8NHM5 1336 aa14.69□□□□□ -0.06
SCAF8-203ENST00000417268 ATP2B4P23634 1241 aa14.68□□□□□ -0.06
SCAF8-203ENST00000417268 EIF6P56537 245 aaKnown RBP14.68□□□□□ -0.06
SCAF8-203ENST00000417268 KCNQ4P56696 695 aa14.68□□□□□ -0.06
SCAF8-203ENST00000417268 C2CD5Q86YS7 1000 aa14.68□□□□□ -0.06
SCAF8-203ENST00000417268 DHX37Q8IY37 1157 aaKnown RBP14.68□□□□□ -0.06
SCAF8-203ENST00000417268 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.68□□□□□ -0.06
SCAF8-203ENST00000417268 V9GYY5 206 aaPredicted RBP14.68□□□□□ -0.06
SCAF8-203ENST00000417268 TOP1P11387 765 aaKnown RBP14.68□□□□□ -0.06
SCAF8-203ENST00000417268 KIF4BQ2VIQ3 1234 aa14.68□□□□□ -0.06
SCAF8-203ENST00000417268 CTAGE5O15320 804 aa14.68□□□□□ -0.06
SCAF8-203ENST00000417268 GPATCH11Q8N954 259 aa14.68□□□□□ -0.06
SCAF8-203ENST00000417268 NECAB1Q8N987 351 aa14.68□□□□□ -0.06
SCAF8-203ENST00000417268 ATG3Q9NT62 314 aa14.68□□□□□ -0.06
SCAF8-203ENST00000417268 KIAA1210Q9ULL0 1709 aa14.68□□□□□ -0.06
SCAF8-203ENST00000417268 RBM25P49756 843 aaKnown RBP14.68□□□□□ -0.06
SCAF8-203ENST00000417268 ZFP91Q96JP5 570 aaPredicted RBP14.68□□□□□ -0.06
SCAF8-203ENST00000417268 CNPY2Q9Y2B0 182 aa14.68□□□□□ -0.06
SCAF8-203ENST00000417268 GJA3Q9Y6H8 435 aa14.68□□□□□ -0.06
SCAF8-203ENST00000417268 ZAP70P43403 619 aa14.67□□□□□ -0.06
SCAF8-203ENST00000417268 NLRP10Q86W26 655 aa14.67□□□□□ -0.06
SCAF8-203ENST00000417268 GIMAP7Q8NHV1 300 aa14.67□□□□□ -0.06
SCAF8-203ENST00000417268 GREM2Q9H772 168 aa14.67□□□□□ -0.06
SCAF8-203ENST00000417268 RTL9Q8NET4 1388 aa14.67□□□□□ -0.06
SCAF8-203ENST00000417268 GPAA1O43292 621 aa14.67□□□□□ -0.06
SCAF8-203ENST00000417268 SERPINB2P05120 415 aa14.67□□□□□ -0.06
SCAF8-203ENST00000417268 TMC6Q7Z403 805 aa14.67□□□□□ -0.06
SCAF8-203ENST00000417268 CCDC148Q8NFR7 591 aa14.67□□□□□ -0.06
SCAF8-203ENST00000417268 SOS2Q07890 1332 aaPredicted RBP14.67□□□□□ -0.06
SCAF8-203ENST00000417268 RPS6KA4O75676 772 aa14.67□□□□□ -0.06
SCAF8-203ENST00000417268 CLEC4GQ6UXB4 293 aa14.67□□□□□ -0.06
SCAF8-203ENST00000417268 NIM1KQ8IY84 436 aa14.67□□□□□ -0.06
SCAF8-203ENST00000417268 USP26Q9BXU7 913 aa14.67□□□□□ -0.06
SCAF8-203ENST00000417268 DEPDC5O75140 1603 aa14.67□□□□□ -0.06
SCAF8-203ENST00000417268 SHTN1A0MZ66 631 aa14.67□□□□□ -0.06
SCAF8-203ENST00000417268 HSPA1LP34931 641 aa14.67□□□□□ -0.06
SCAF8-203ENST00000417268 FAM200AQ8TCP9 573 aa14.67□□□□□ -0.06
SCAF8-203ENST00000417268 EAF2Q96CJ1 260 aaPredicted RBP14.67□□□□□ -0.06
SCAF8-203ENST00000417268 TMX1Q9H3N1 280 aa14.67□□□□□ -0.06
SCAF8-203ENST00000417268 ZSCAN16Q9H4T2 348 aaPredicted RBP14.67□□□□□ -0.06
SCAF8-203ENST00000417268 ZSCAN22P10073 491 aaPredicted RBP14.66□□□□□ -0.06
SCAF8-203ENST00000417268 VPS72Q15906 364 aa14.66□□□□□ -0.06
SCAF8-203ENST00000417268 PPIP5K2O43314 1243 aa14.66□□□□□ -0.06
SCAF8-203ENST00000417268 KIF5CO60282 957 aa14.66□□□□□ -0.06
SCAF8-203ENST00000417268 SGSM2O43147 1006 aa14.66□□□□□ -0.06
SCAF8-203ENST00000417268 SKILP12757 684 aa14.66□□□□□ -0.06
SCAF8-203ENST00000417268 TMC4Q7Z404 712 aa14.66□□□□□ -0.06
SCAF8-203ENST00000417268 ARMT1Q9H993 441 aa14.66□□□□□ -0.06
SCAF8-203ENST00000417268 KDM4FA0A1W2PPD8 638 aa14.66□□□□□ -0.06
SCAF8-203ENST00000417268 IBSPP21815 317 aaPredicted RBP14.66□□□□□ -0.06
SCAF8-203ENST00000417268 TERF1P54274 439 aa14.66□□□□□ -0.06
SCAF8-203ENST00000417268 ALG1Q9BT22 464 aa14.66□□□□□ -0.06
SCAF8-203ENST00000417268 DCCP43146 1447 aa14.65□□□□□ -0.06
SCAF8-203ENST00000417268 CIAO1O76071 339 aa14.65□□□□□ -0.06
SCAF8-203ENST00000417268 PDE8BO95263 885 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms