RNA–Protein interactions for RNA: ENST00000412710.1

CUBNP1-201, Transcript of cubilin pseudogene 1, humanhuman

BASIC

Gene CUBNP1, Length 1,790 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNP1-201ENST00000412710 U2AF2P26368 475 aaKnown RBP eCLIP10.45□□□□□ -0.74
CUBNP1-201ENST00000412710 ZC3H6P61129 1189 aaKnown RBP10.45□□□□□ -0.74
CUBNP1-201ENST00000412710 TIMM10P62072 90 aa10.45□□□□□ -0.74
CUBNP1-201ENST00000412710 KIF23Q02241 960 aaPredicted RBP10.45□□□□□ -0.74
CUBNP1-201ENST00000412710 CEBPZQ03701 1054 aaKnown RBP10.45□□□□□ -0.74
CUBNP1-201ENST00000412710 NCAPHQ15003 741 aa10.45□□□□□ -0.74
CUBNP1-201ENST00000412710 ZRSR1Q15695 479 aaKnown RBP10.45□□□□□ -0.74
CUBNP1-201ENST00000412710 ANO1Q5XXA6 986 aa10.45□□□□□ -0.74
CUBNP1-201ENST00000412710 LMOD2Q6P5Q4 547 aa10.45□□□□□ -0.74
CUBNP1-201ENST00000412710 PROSER2Q86WR7 435 aaPredicted RBP10.45□□□□□ -0.74
CUBNP1-201ENST00000412710 ORC3Q9UBD5 711 aaPredicted RBP10.45□□□□□ -0.74
CUBNP1-201ENST00000412710 HPSEQ9Y251 543 aa10.45□□□□□ -0.74
CUBNP1-201ENST00000412710 FAM177BA6PVY3 158 aa10.44□□□□□ -0.74
CUBNP1-201ENST00000412710 CBFA2T2O43439 604 aa10.44□□□□□ -0.74
CUBNP1-201ENST00000412710 ZNF202O95125 648 aa10.44□□□□□ -0.74
CUBNP1-201ENST00000412710 CSF1RP07333 972 aa10.44□□□□□ -0.74
CUBNP1-201ENST00000412710 SF3A1Q15459 793 aaKnown RBP10.44□□□□□ -0.74
CUBNP1-201ENST00000412710 CCDC93Q567U6 631 aa10.44□□□□□ -0.74
CUBNP1-201ENST00000412710 TAF3Q5VWG9 929 aa10.44□□□□□ -0.74
CUBNP1-201ENST00000412710 SYNE3Q6ZMZ3 975 aa10.44□□□□□ -0.74
CUBNP1-201ENST00000412710 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.44□□□□□ -0.74
CUBNP1-201ENST00000412710 PHLPP2Q6ZVD8 1323 aa10.44□□□□□ -0.74
CUBNP1-201ENST00000412710 CDHR2Q9BYE9 1310 aa10.44□□□□□ -0.74
CUBNP1-201ENST00000412710 STK36Q9NRP7 1315 aa10.44□□□□□ -0.74
CUBNP1-201ENST00000412710 KLF18A0A0U1RQI7 1052 aa10.44□□□□□ -0.74
CUBNP1-201ENST00000412710 USP27XA6NNY8 438 aa10.44□□□□□ -0.74
CUBNP1-201ENST00000412710 FGAP02671 866 aa10.44□□□□□ -0.74
CUBNP1-201ENST00000412710 PCCAP05165 728 aaPredicted RBP10.44□□□□□ -0.74
CUBNP1-201ENST00000412710 SFPQP23246 707 aaKnown RBP eCLIP10.44□□□□□ -0.74
CUBNP1-201ENST00000412710 ANTXR2P58335 489 aa10.44□□□□□ -0.74
CUBNP1-201ENST00000412710 ALX1Q15699 326 aa10.44□□□□□ -0.74
CUBNP1-201ENST00000412710 DPCR1Q3MIW9 517 aa10.44□□□□□ -0.74
CUBNP1-201ENST00000412710 LRRC24Q50LG9 513 aa10.44□□□□□ -0.74
CUBNP1-201ENST00000412710 E4F1Q66K89 784 aaPredicted RBP10.44□□□□□ -0.74
CUBNP1-201ENST00000412710 RBM33Q96EV2 1170 aaKnown RBP10.44□□□□□ -0.74
CUBNP1-201ENST00000412710 SRRTQ9BXP5 876 aaKnown RBP10.44□□□□□ -0.74
CUBNP1-201ENST00000412710 BCL11BQ9C0K0 894 aaPredicted RBP10.44□□□□□ -0.74
CUBNP1-201ENST00000412710 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.44□□□□□ -0.74
CUBNP1-201ENST00000412710 TMX1Q9H3N1 280 aa10.44□□□□□ -0.74
CUBNP1-201ENST00000412710 CLIC4Q9Y696 253 aa10.44□□□□□ -0.74
CUBNP1-201ENST00000412710 A0A1B0GVL5 298 aa10.43□□□□□ -0.74
CUBNP1-201ENST00000412710 GOLGA8BA8MQT2 603 aa10.43□□□□□ -0.74
CUBNP1-201ENST00000412710 TCIRG1Q13488 830 aa10.43□□□□□ -0.74
CUBNP1-201ENST00000412710 ARID5BQ14865 1188 aa10.43□□□□□ -0.74
CUBNP1-201ENST00000412710 TTF1Q15361 905 aaPredicted RBP10.43□□□□□ -0.74
CUBNP1-201ENST00000412710 TTC39AQ5SRH9 613 aa10.43□□□□□ -0.74
CUBNP1-201ENST00000412710 TTLL7Q6ZT98 887 aa10.43□□□□□ -0.74
CUBNP1-201ENST00000412710 FILIP1Q7Z7B0 1213 aa10.43□□□□□ -0.74
CUBNP1-201ENST00000412710 RALYLQ86SE5 291 aaKnown RBP10.43□□□□□ -0.74
CUBNP1-201ENST00000412710 KRT222Q8N1A0 295 aa10.43□□□□□ -0.74
CUBNP1-201ENST00000412710 TMEM87BQ96K49 555 aa10.43□□□□□ -0.74
CUBNP1-201ENST00000412710 MTA3Q9BTC8 594 aa10.43□□□□□ -0.74
CUBNP1-201ENST00000412710 XPO4Q9C0E2 1151 aaKnown RBP10.43□□□□□ -0.74
CUBNP1-201ENST00000412710 ZNF215Q9UL58 517 aaPredicted RBP10.43□□□□□ -0.74
CUBNP1-201ENST00000412710 LRP6O75581 1613 aa10.43□□□□□ -0.74
CUBNP1-201ENST00000412710 SPATA31A3Q5VYP0 1347 aa10.42□□□□□ -0.74
CUBNP1-201ENST00000412710 SPDYE4A6NLX3 237 aa10.42□□□□□ -0.74
CUBNP1-201ENST00000412710 CPLX1O14810 134 aa10.42□□□□□ -0.74
CUBNP1-201ENST00000412710 CSB-PGBD3P0DP91 1061 aa10.42□□□□□ -0.74
CUBNP1-201ENST00000412710 PFKFB1P16118 471 aa10.42□□□□□ -0.74
CUBNP1-201ENST00000412710 UBE3CQ15386 1083 aa10.42□□□□□ -0.74
CUBNP1-201ENST00000412710 CCDC57Q2TAC2 916 aa10.42□□□□□ -0.74
CUBNP1-201ENST00000412710 TTLL5Q6EMB2 1281 aa10.42□□□□□ -0.74
CUBNP1-201ENST00000412710 ARMCX5Q6P1M9 558 aa10.42□□□□□ -0.74
CUBNP1-201ENST00000412710 CPLX2Q6PUV4 134 aaKnown RBP10.42□□□□□ -0.74
CUBNP1-201ENST00000412710 SGMS1Q86VZ5 419 aa10.42□□□□□ -0.74
CUBNP1-201ENST00000412710 XAGE2Q96GT9 111 aa10.42□□□□□ -0.74
CUBNP1-201ENST00000412710 PPP1R13BQ96KQ4 1090 aa10.42□□□□□ -0.74
CUBNP1-201ENST00000412710 TEX13AQ9BXU3 409 aaPredicted RBP10.42□□□□□ -0.74
CUBNP1-201ENST00000412710 ANGEL1Q9UNK9 670 aaKnown RBP10.42□□□□□ -0.74
CUBNP1-201ENST00000412710 AKAP11Q9UKA4 1901 aa10.42□□□□□ -0.74
CUBNP1-201ENST00000412710 RIC1Q4ADV7 1423 aa10.42□□□□□ -0.74
CUBNP1-201ENST00000412710 TIAM2Q8IVF5 1701 aa10.42□□□□□ -0.74
CUBNP1-201ENST00000412710 SHANK3Q9BYB0 1731 aa10.42□□□□□ -0.74
CUBNP1-201ENST00000412710 WDR17Q8IZU2 1322 aa10.42□□□□□ -0.74
CUBNP1-201ENST00000412710 A0A0G2JLW4 131 aa10.42□□□□□ -0.74
CUBNP1-201ENST00000412710 ZNF213O14771 459 aa10.42□□□□□ -0.74
CUBNP1-201ENST00000412710 CUTAO60888 179 aa10.42□□□□□ -0.74
CUBNP1-201ENST00000412710 H2AFXP16104 143 aaPredicted RBP10.42□□□□□ -0.74
CUBNP1-201ENST00000412710 RCAN1P53805 252 aa10.42□□□□□ -0.74
CUBNP1-201ENST00000412710 MYL5Q02045 173 aa10.42□□□□□ -0.74
CUBNP1-201ENST00000412710 PTPAQ15257 358 aa10.42□□□□□ -0.74
CUBNP1-201ENST00000412710 CT47A1Q5JQC4 288 aaPredicted RBP10.42□□□□□ -0.74
CUBNP1-201ENST00000412710 RESP18Q5W5W9 173 aa10.42□□□□□ -0.74
CUBNP1-201ENST00000412710 IFNKQ9P0W0 207 aa10.42□□□□□ -0.74
CUBNP1-201ENST00000412710 LRP5O75197 1615 aa10.42□□□□□ -0.74
CUBNP1-201ENST00000412710 ARAP2Q8WZ64 1704 aa10.41□□□□□ -0.74
CUBNP1-201ENST00000412710 COL22A1Q8NFW1 1626 aaPredicted RBP10.41□□□□□ -0.74
CUBNP1-201ENST00000412710 GOLGA6L9A6NEM1 432 aa10.41□□□□□ -0.74
CUBNP1-201ENST00000412710 SH2B2O14492 632 aaPredicted RBP10.41□□□□□ -0.74
CUBNP1-201ENST00000412710 TPM1P09493 284 aa10.41□□□□□ -0.74
CUBNP1-201ENST00000412710 ATF3P18847 181 aa10.41□□□□□ -0.74
CUBNP1-201ENST00000412710 ADD2P35612 726 aa10.41□□□□□ -0.74
CUBNP1-201ENST00000412710 ETF1P62495 437 aaKnown RBP10.41□□□□□ -0.74
CUBNP1-201ENST00000412710 FANCCQ00597 558 aa10.41□□□□□ -0.74
CUBNP1-201ENST00000412710 GUCY1B3Q02153 619 aa10.41□□□□□ -0.74
CUBNP1-201ENST00000412710 TRDNQ13061 729 aa10.41□□□□□ -0.74
CUBNP1-201ENST00000412710 KMT5BQ4FZB7 885 aa10.41□□□□□ -0.74
CUBNP1-201ENST00000412710 ZCRB1Q8TBF4 217 aaKnown RBP10.41□□□□□ -0.74
CUBNP1-201ENST00000412710 MAP3K14Q99558 947 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms