RNA–Protein interactions for RNA: ENST00000411993.1

HDAC9-205, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 626 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-205ENST00000411993 PATL2C9JE40 543 aaKnown RBP8.75□□□□□ -1.01
HDAC9-205ENST00000411993 DLGAP3O95886 979 aa8.75□□□□□ -1.01
HDAC9-205ENST00000411993 MAOBP27338 520 aa8.75□□□□□ -1.01
HDAC9-205ENST00000411993 PTPN12Q05209 780 aaKnown RBP8.75□□□□□ -1.01
HDAC9-205ENST00000411993 LRP8Q14114 963 aa8.75□□□□□ -1.01
HDAC9-205ENST00000411993 GRM2Q14416 872 aa8.75□□□□□ -1.01
HDAC9-205ENST00000411993 POU4F3Q15319 338 aa8.75□□□□□ -1.01
HDAC9-205ENST00000411993 ARTNQ5T4W7 220 aa8.75□□□□□ -1.01
HDAC9-205ENST00000411993 BEND4Q6ZU67 534 aa8.75□□□□□ -1.01
HDAC9-205ENST00000411993 SMG8Q8ND04 991 aaKnown RBP8.75□□□□□ -1.01
HDAC9-205ENST00000411993 CORO1BQ9BR76 489 aa8.75□□□□□ -1.01
HDAC9-205ENST00000411993 SUGCTQ9HAC7 445 aa8.75□□□□□ -1.01
HDAC9-205ENST00000411993 ZFYVE1Q9HBF4 777 aa8.75□□□□□ -1.01
HDAC9-205ENST00000411993 ZFP64Q9NPA5 681 aa8.75□□□□□ -1.01
HDAC9-205ENST00000411993 HMX2A2RU54 273 aa8.74□□□□□ -1.01
HDAC9-205ENST00000411993 TREHO43280 583 aa8.74□□□□□ -1.01
HDAC9-205ENST00000411993 RXRBP28702 533 aa8.74□□□□□ -1.01
HDAC9-205ENST00000411993 CLEC10AQ8IUN9 316 aa8.74□□□□□ -1.01
HDAC9-205ENST00000411993 ZSCAN29Q8IWY8 852 aaPredicted RBP8.74□□□□□ -1.01
HDAC9-205ENST00000411993 NRSN2Q9GZP1 204 aa8.74□□□□□ -1.01
HDAC9-205ENST00000411993 PPP4R2Q9NY27 417 aa8.74□□□□□ -1.01
HDAC9-205ENST00000411993 TIAF1O95411 115 aa8.73□□□□□ -1.01
HDAC9-205ENST00000411993 NFIAQ12857 509 aa8.73□□□□□ -1.01
HDAC9-205ENST00000411993 DSC3Q14574 896 aa8.73□□□□□ -1.01
HDAC9-205ENST00000411993 PI16Q6UXB8 463 aa8.73□□□□□ -1.01
HDAC9-205ENST00000411993 DTHD1Q6ZMT9 781 aa8.73□□□□□ -1.01
HDAC9-205ENST00000411993 FAM83CQ9BQN1 747 aa8.73□□□□□ -1.01
HDAC9-205ENST00000411993 DRD2P14416 443 aa8.72□□□□□ -1.01
HDAC9-205ENST00000411993 MAP4P27816 1152 aaKnown RBP8.72□□□□□ -1.01
HDAC9-205ENST00000411993 MAPK8P45983 427 aa8.72□□□□□ -1.01
HDAC9-205ENST00000411993 USP11P51784 963 aa8.72□□□□□ -1.01
HDAC9-205ENST00000411993 FCGRTP55899 365 aa8.72□□□□□ -1.01
HDAC9-205ENST00000411993 ENOX2Q16206 610 aaKnown RBP8.72□□□□□ -1.01
HDAC9-205ENST00000411993 SGO2Q562F6 1265 aa8.72□□□□□ -1.01
HDAC9-205ENST00000411993 RPS26P11Q5JNZ5 115 aaPredicted RBP8.72□□□□□ -1.01
HDAC9-205ENST00000411993 RNF43Q68DV7 783 aa8.72□□□□□ -1.01
HDAC9-205ENST00000411993 GLIS3Q8NEA6 775 aa8.72□□□□□ -1.01
HDAC9-205ENST00000411993 TRIM56Q9BRZ2 755 aaKnown RBP8.72□□□□□ -1.01
HDAC9-205ENST00000411993 RAD18Q9NS91 495 aa8.72□□□□□ -1.01
HDAC9-205ENST00000411993 AP3B2Q13367 1082 aa8.71□□□□□ -1.02
HDAC9-205ENST00000411993 PDE3AQ14432 1141 aa8.71□□□□□ -1.02
HDAC9-205ENST00000411993 NBPF11Q86T75 865 aa8.71□□□□□ -1.02
HDAC9-205ENST00000411993 DBNDD2Q9BQY9 259 aa8.71□□□□□ -1.02
HDAC9-205ENST00000411993 BCO2Q9BYV7 579 aa8.71□□□□□ -1.02
HDAC9-205ENST00000411993 CTSBP07858 339 aa8.7□□□□□ -1.02
HDAC9-205ENST00000411993 ADH5P11766 374 aa8.7□□□□□ -1.02
HDAC9-205ENST00000411993 ZNF157P51786 506 aaPredicted RBP8.7□□□□□ -1.02
HDAC9-205ENST00000411993 SOX4Q06945 474 aaPredicted RBP8.7□□□□□ -1.02
HDAC9-205ENST00000411993 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.7□□□□□ -1.02
HDAC9-205ENST00000411993 ASB16Q96NS5 453 aa8.7□□□□□ -1.02
HDAC9-205ENST00000411993 YIPF2Q9BWQ6 316 aa8.7□□□□□ -1.02
HDAC9-205ENST00000411993 GPN3Q9UHW5 284 aaPredicted RBP8.7□□□□□ -1.02
HDAC9-205ENST00000411993 HYAL3O43820 417 aaPredicted RBP8.69□□□□□ -1.02
HDAC9-205ENST00000411993 ECEL1O95672 775 aa8.69□□□□□ -1.02
HDAC9-205ENST00000411993 AKAP4Q5JQC9 854 aa8.69□□□□□ -1.02
HDAC9-205ENST00000411993 C2CD4AQ8NCU7 369 aaPredicted RBP8.69□□□□□ -1.02
HDAC9-205ENST00000411993 TGFB1P01137 390 aa8.68□□□□□ -1.02
HDAC9-205ENST00000411993 XRCC5P13010 732 aaKnown RBP8.68□□□□□ -1.02
HDAC9-205ENST00000411993 SSTR4P31391 388 aa8.68□□□□□ -1.02
HDAC9-205ENST00000411993 PPP2R3AQ06190 1150 aa8.68□□□□□ -1.02
HDAC9-205ENST00000411993 FAAP100Q0VG06 881 aa8.68□□□□□ -1.02
HDAC9-205ENST00000411993 PAOXQ6QHF9 649 aa8.68□□□□□ -1.02
HDAC9-205ENST00000411993 FBLIM1Q8WUP2 373 aa8.68□□□□□ -1.02
HDAC9-205ENST00000411993 PCMTD2Q9NV79 361 aa8.68□□□□□ -1.02
HDAC9-205ENST00000411993 AP4E1Q9UPM8 1137 aa8.68□□□□□ -1.02
HDAC9-205ENST00000411993 FAM95CA0A1B0GW59 222 aa8.67□□□□□ -1.02
HDAC9-205ENST00000411993 ATP2B2Q01814 1243 aa8.67□□□□□ -1.02
HDAC9-205ENST00000411993 FMR1Q06787 632 aaKnown RBP eCLIP8.67□□□□□ -1.02
HDAC9-205ENST00000411993 NFKBIBQ15653 356 aa8.67□□□□□ -1.02
HDAC9-205ENST00000411993 NXPE4Q6UWF7 544 aa8.67□□□□□ -1.02
HDAC9-205ENST00000411993 ZDHHC13Q8IUH4 622 aa8.67□□□□□ -1.02
HDAC9-205ENST00000411993 SHKBP1Q8TBC3 707 aa8.67□□□□□ -1.02
HDAC9-205ENST00000411993 FBF1Q8TES7 1133 aa8.67□□□□□ -1.02
HDAC9-205ENST00000411993 MFSD14AQ96MC6 490 aa8.67□□□□□ -1.02
HDAC9-205ENST00000411993 AKAP2Q9Y2D5 859 aa8.67□□□□□ -1.02
HDAC9-205ENST00000411993 PDIA4P13667 645 aaKnown RBP8.66□□□□□ -1.02
HDAC9-205ENST00000411993 RAB6AP20340 208 aa8.66□□□□□ -1.02
HDAC9-205ENST00000411993 HNRNPUQ00839 825 aaKnown RBP eCLIP8.66□□□□□ -1.02
HDAC9-205ENST00000411993 CDPF1Q6NVV7 123 aa8.66□□□□□ -1.02
HDAC9-205ENST00000411993 DYMQ7RTS9 669 aa8.66□□□□□ -1.02
HDAC9-205ENST00000411993 AEBP1Q8IUX7 1158 aa8.66□□□□□ -1.02
HDAC9-205ENST00000411993 GIMAP7Q8NHV1 300 aa8.66□□□□□ -1.02
HDAC9-205ENST00000411993 ACTL7BQ9Y614 415 aa8.66□□□□□ -1.02
HDAC9-205ENST00000411993 COBLO75128 1261 aa8.65□□□□□ -1.02
HDAC9-205ENST00000411993 GRIK1P39086 918 aa8.65□□□□□ -1.02
HDAC9-205ENST00000411993 ALG1LQ6GMV1 187 aa8.65□□□□□ -1.02
HDAC9-205ENST00000411993 ZC3H12CQ9C0D7 883 aaKnown RBP8.65□□□□□ -1.02
HDAC9-205ENST00000411993 TMEM39AQ9NV64 488 aa8.65□□□□□ -1.02
HDAC9-205ENST00000411993 WDR64B1ANS9 1081 aa8.64□□□□□ -1.03
HDAC9-205ENST00000411993 AOC2O75106 756 aa8.64□□□□□ -1.03
HDAC9-205ENST00000411993 FBXL6Q8N531 539 aa8.64□□□□□ -1.03
HDAC9-205ENST00000411993 SETDB2Q96T68 719 aa8.64□□□□□ -1.03
HDAC9-205ENST00000411993 WDR18Q9BV38 432 aa8.64□□□□□ -1.03
HDAC9-205ENST00000411993 GSTT1P30711 240 aa8.63□□□□□ -1.03
HDAC9-205ENST00000411993 CD97P48960 835 aa8.63□□□□□ -1.03
HDAC9-205ENST00000411993 CCDC86Q9H6F5 360 aaKnown RBP8.63□□□□□ -1.03
HDAC9-205ENST00000411993 ATG3Q9NT62 314 aa8.63□□□□□ -1.03
HDAC9-205ENST00000411993 GSTP1P09211 210 aaKnown RBP8.62□□□□□ -1.03
HDAC9-205ENST00000411993 LIG1P18858 919 aa8.62□□□□□ -1.03
HDAC9-205ENST00000411993 ASPAP45381 313 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms