RNA–Protein interactions for RNA: ENST00000411651.6

SUMO3-204, Transcript of small ubiquitin-like modifier 3, humanhuman

TSL 2 BASIC

Gene SUMO3, Length 1,921 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3-204ENST00000411651 TMEM87BQ96K49 555 aa23.71■■□□□ 1.39
SUMO3-204ENST00000411651 PDLIM2Q96JY6 352 aa23.7■■□□□ 1.38
SUMO3-204ENST00000411651 MTA3Q9BTC8 594 aa23.7■■□□□ 1.38
SUMO3-204ENST00000411651 COL4A1P02462 1669 aa23.7■■□□□ 1.38
SUMO3-204ENST00000411651 NLRP3Q96P20 1036 aa23.69■■□□□ 1.38
SUMO3-204ENST00000411651 ANGEL1Q9UNK9 670 aaKnown RBP23.69■■□□□ 1.38
SUMO3-204ENST00000411651 GNPATO15228 680 aa23.69■■□□□ 1.38
SUMO3-204ENST00000411651 IGSF3O75054 1194 aa23.69■■□□□ 1.38
SUMO3-204ENST00000411651 GTF2E1P29083 439 aaPredicted RBP23.69■■□□□ 1.38
SUMO3-204ENST00000411651 TPTE2Q6XPS3 522 aa23.69■■□□□ 1.38
SUMO3-204ENST00000411651 IFNL3Q8IZI9 196 aa23.69■■□□□ 1.38
SUMO3-204ENST00000411651 DDX11Q96FC9 970 aa23.69■■□□□ 1.38
SUMO3-204ENST00000411651 SPATA32Q96LK8 384 aa23.69■■□□□ 1.38
SUMO3-204ENST00000411651 NACAP1Q9BZK3 213 aa23.69■■□□□ 1.38
SUMO3-204ENST00000411651 CNNM2Q9H8M5 875 aa23.69■■□□□ 1.38
SUMO3-204ENST00000411651 MINPP1Q9UNW1 487 aa23.69■■□□□ 1.38
SUMO3-204ENST00000411651 MYH15Q9Y2K3 1946 aa23.68■■□□□ 1.38
SUMO3-204ENST00000411651 C4BP0C0L5 1744 aa23.68■■□□□ 1.38
SUMO3-204ENST00000411651 MBD4O95243 580 aa23.68■■□□□ 1.38
SUMO3-204ENST00000411651 APPP05067 770 aa23.68■■□□□ 1.38
SUMO3-204ENST00000411651 CCT2P78371 535 aaKnown RBP23.68■■□□□ 1.38
SUMO3-204ENST00000411651 UVSSAQ2YD98 709 aa23.68■■□□□ 1.38
SUMO3-204ENST00000411651 HS1BP3Q53T59 392 aa23.68■■□□□ 1.38
SUMO3-204ENST00000411651 C3orf67Q6ZVT6 689 aa23.68■■□□□ 1.38
SUMO3-204ENST00000411651 CHST3Q7LGC8 479 aa23.68■■□□□ 1.38
SUMO3-204ENST00000411651 PTF1AQ7RTS3 328 aa23.68■■□□□ 1.38
SUMO3-204ENST00000411651 TBC1D10CQ8IV04 446 aa23.68■■□□□ 1.38
SUMO3-204ENST00000411651 LEO1Q8WVC0 666 aaPredicted RBP23.68■■□□□ 1.38
SUMO3-204ENST00000411651 TRIM44Q96DX7 344 aaPredicted RBP23.68■■□□□ 1.38
SUMO3-204ENST00000411651 KLF18A0A0U1RQI7 1052 aa23.67■■□□□ 1.38
SUMO3-204ENST00000411651 SNAP23O00161 211 aa23.67■■□□□ 1.38
SUMO3-204ENST00000411651 CAVIN4Q5BKX8 364 aa23.67■■□□□ 1.38
SUMO3-204ENST00000411651 ANKRD2Q9GZV1 360 aa23.67■■□□□ 1.38
SUMO3-204ENST00000411651 NAPBQ9H115 298 aa23.67■■□□□ 1.38
SUMO3-204ENST00000411651 DENND2AQ9ULE3 1009 aa23.67■■□□□ 1.38
SUMO3-204ENST00000411651 HPS5Q9UPZ3 1129 aa23.67■■□□□ 1.38
SUMO3-204ENST00000411651 NBPF5PQ86XG9 351 aaPredicted RBP23.67■■□□□ 1.38
SUMO3-204ENST00000411651 EPB41L4AQ9HCS5 686 aaPredicted RBP23.67■■□□□ 1.38
SUMO3-204ENST00000411651 C4AP0C0L4 1744 aa23.66■■□□□ 1.38
SUMO3-204ENST00000411651 SH2B2O14492 632 aaPredicted RBP23.66■■□□□ 1.38
SUMO3-204ENST00000411651 DTNBO60941 627 aa23.66■■□□□ 1.38
SUMO3-204ENST00000411651 ADRA2BP18089 450 aa23.66■■□□□ 1.38
SUMO3-204ENST00000411651 SGMS1Q86VZ5 419 aa23.66■■□□□ 1.38
SUMO3-204ENST00000411651 GOLGA8BA8MQT2 603 aa23.65■■□□□ 1.38
SUMO3-204ENST00000411651 GSG1L2A8MUP6 293 aa23.65■■□□□ 1.38
SUMO3-204ENST00000411651 RPS8P62241 208 aaKnown RBP23.65■■□□□ 1.38
SUMO3-204ENST00000411651 KRT23Q9C075 422 aa23.65■■□□□ 1.38
SUMO3-204ENST00000411651 NCOA5Q9HCD5 579 aaKnown RBP23.65■■□□□ 1.38
SUMO3-204ENST00000411651 LRP2BPQ9P2M1 347 aa23.65■■□□□ 1.38
SUMO3-204ENST00000411651 LIFRP42702 1097 aa23.65■■□□□ 1.38
SUMO3-204ENST00000411651 NID2Q14112 1375 aa23.65■■□□□ 1.38
SUMO3-204ENST00000411651 CHD4Q14839 1912 aa23.65■■□□□ 1.38
SUMO3-204ENST00000411651 CDKL5O76039 1030 aa23.64■■□□□ 1.37
SUMO3-204ENST00000411651 FDPSP14324 419 aaKnown RBP23.64■■□□□ 1.37
SUMO3-204ENST00000411651 STAG1Q8WVM7 1258 aa23.64■■□□□ 1.37
SUMO3-204ENST00000411651 FUCA2Q9BTY2 467 aa23.64■■□□□ 1.37
SUMO3-204ENST00000411651 DDX19AQ9NUU7 478 aaKnown RBP23.64■■□□□ 1.37
SUMO3-204ENST00000411651 TRPC5Q9UL62 973 aaPredicted RBP23.64■■□□□ 1.37
SUMO3-204ENST00000411651 GOLGA6L4A6NEF3 574 aa23.63■■□□□ 1.37
SUMO3-204ENST00000411651 KCNQ4P56696 695 aa23.63■■□□□ 1.37
SUMO3-204ENST00000411651 FAM173BQ6P4H8 233 aa23.63■■□□□ 1.37
SUMO3-204ENST00000411651 FBXO33Q7Z6M2 555 aa23.63■■□□□ 1.37
SUMO3-204ENST00000411651 CELF1Q92879 486 aaKnown RBP23.63■■□□□ 1.37
SUMO3-204ENST00000411651 ARHGEF1Q92888 912 aaKnown RBP23.63■■□□□ 1.37
SUMO3-204ENST00000411651 ZNF396Q96N95 335 aaPredicted RBP23.63■■□□□ 1.37
SUMO3-204ENST00000411651 ADD1P35611 737 aaKnown RBP23.63■■□□□ 1.37
SUMO3-204ENST00000411651 AKNAD1Q5T1N1 836 aa23.63■■□□□ 1.37
SUMO3-204ENST00000411651 BICDL1Q6ZP65 573 aa23.63■■□□□ 1.37
SUMO3-204ENST00000411651 BCL11BQ9C0K0 894 aaPredicted RBP23.63■■□□□ 1.37
SUMO3-204ENST00000411651 ARMT1Q9H993 441 aa23.63■■□□□ 1.37
SUMO3-204ENST00000411651 SRP68Q9UHB9 627 aaKnown RBP23.63■■□□□ 1.37
SUMO3-204ENST00000411651 NAP1L2Q9ULW6 460 aaPredicted RBP23.63■■□□□ 1.37
SUMO3-204ENST00000411651 MEX3CQ5U5Q3 659 aaKnown RBP23.62■■□□□ 1.37
SUMO3-204ENST00000411651 FAM84BQ96KN1 310 aaPredicted RBP23.62■■□□□ 1.37
SUMO3-204ENST00000411651 RNF41Q9H4P4 317 aaPredicted RBP23.62■■□□□ 1.37
SUMO3-204ENST00000411651 GPHNQ9NQX3 736 aaPredicted RBP23.62■■□□□ 1.37
SUMO3-204ENST00000411651 RCOR1Q9UKL0 485 aa23.62■■□□□ 1.37
SUMO3-204ENST00000411651 CACNA1SQ13698 1873 aa23.62■■□□□ 1.37
SUMO3-204ENST00000411651 COL1A1P02452 1464 aaPredicted RBP23.62■■□□□ 1.37
SUMO3-204ENST00000411651 AFF2P51816 1311 aa23.61■■□□□ 1.37
SUMO3-204ENST00000411651 CPLX1O14810 134 aa23.61■■□□□ 1.37
SUMO3-204ENST00000411651 RCAN1P53805 252 aa23.61■■□□□ 1.37
SUMO3-204ENST00000411651 CYB5R4Q7L1T6 521 aa23.61■■□□□ 1.37
SUMO3-204ENST00000411651 IGDCC4Q8TDY8 1250 aa23.61■■□□□ 1.37
SUMO3-204ENST00000411651 ANAPC4Q9UJX5 808 aa23.61■■□□□ 1.37
SUMO3-204ENST00000411651 NEDD4P46934 1319 aa23.61■■□□□ 1.37
SUMO3-204ENST00000411651 HMGB2P26583 209 aaKnown RBP23.61■■□□□ 1.37
SUMO3-204ENST00000411651 CPLX2Q6PUV4 134 aaKnown RBP23.61■■□□□ 1.37
SUMO3-204ENST00000411651 LCORLQ8N3X6 602 aa23.61■■□□□ 1.37
SUMO3-204ENST00000411651 SLC4A4Q9Y6R1 1079 aa23.61■■□□□ 1.37
SUMO3-204ENST00000411651 GYG1P46976 350 aa23.6■■□□□ 1.37
SUMO3-204ENST00000411651 TRAPPC3LQ5T215 181 aa23.6■■□□□ 1.37
SUMO3-204ENST00000411651 APOA5Q6Q788 366 aa23.6■■□□□ 1.37
SUMO3-204ENST00000411651 RBM43Q6ZSC3 357 aaKnown RBP23.6■■□□□ 1.37
SUMO3-204ENST00000411651 FBXO18Q8NFZ0 1043 aa23.6■■□□□ 1.37
SUMO3-204ENST00000411651 TFIP11Q9UBB9 837 aaKnown RBP23.6■■□□□ 1.37
SUMO3-204ENST00000411651 B4E1Z4 1266 aa23.59■■□□□ 1.37
SUMO3-204ENST00000411651 GIMAP6Q6P9H5 292 aa23.59■■□□□ 1.37
SUMO3-204ENST00000411651 BRAPQ7Z569 592 aa23.59■■□□□ 1.37
SUMO3-204ENST00000411651 VPS37DQ86XT2 251 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms