RNA–Protein interactions for RNA: ENST00000411092.1

RNU6-55P-201, Transcript of RNA, U6 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU6-55P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-55P-201ENST00000411092 GAS2O43903 313 aaKnown RBP5.12□□□□□ -1.59
RNU6-55P-201ENST00000411092 CD97P48960 835 aa5.12□□□□□ -1.59
RNU6-55P-201ENST00000411092 GSTM4Q03013 218 aa5.12□□□□□ -1.59
RNU6-55P-201ENST00000411092 NUTM2GQ5VZR2 741 aa5.12□□□□□ -1.59
RNU6-55P-201ENST00000411092 USPL1Q5W0Q7 1092 aa5.12□□□□□ -1.59
RNU6-55P-201ENST00000411092 GALNT12Q8IXK2 581 aa5.12□□□□□ -1.59
RNU6-55P-201ENST00000411092 C12orf50Q8NA57 414 aaPredicted RBP5.12□□□□□ -1.59
RNU6-55P-201ENST00000411092 DBNDD2Q9BQY9 259 aa5.12□□□□□ -1.59
RNU6-55P-201ENST00000411092 TMPRSS13Q9BYE2 586 aa5.12□□□□□ -1.59
RNU6-55P-201ENST00000411092 KRTAP9-9Q9BYP9 154 aa5.12□□□□□ -1.59
RNU6-55P-201ENST00000411092 KRTAP9-4Q9BYQ2 154 aa5.12□□□□□ -1.59
RNU6-55P-201ENST00000411092 SOX17Q9H6I2 414 aaPredicted RBP5.12□□□□□ -1.59
RNU6-55P-201ENST00000411092 HIF3AQ9Y2N7 669 aa5.12□□□□□ -1.59
RNU6-55P-201ENST00000411092 COBLO75128 1261 aa5.11□□□□□ -1.59
RNU6-55P-201ENST00000411092 DLGAP3O95886 979 aa5.11□□□□□ -1.59
RNU6-55P-201ENST00000411092 GRIA4P48058 902 aa5.11□□□□□ -1.59
RNU6-55P-201ENST00000411092 ARHGAP4P98171 946 aa5.11□□□□□ -1.59
RNU6-55P-201ENST00000411092 SPRED3Q2MJR0 410 aa5.11□□□□□ -1.59
RNU6-55P-201ENST00000411092 SGO2Q562F6 1265 aa5.11□□□□□ -1.59
RNU6-55P-201ENST00000411092 MCTP1Q6DN14 999 aa5.11□□□□□ -1.59
RNU6-55P-201ENST00000411092 CCNJLQ8IV13 435 aa5.11□□□□□ -1.59
RNU6-55P-201ENST00000411092 SMG8Q8ND04 991 aaKnown RBP5.11□□□□□ -1.59
RNU6-55P-201ENST00000411092 TCF12Q99081 682 aa5.11□□□□□ -1.59
RNU6-55P-201ENST00000411092 LIN7BQ9HAP6 207 aa5.11□□□□□ -1.59
RNU6-55P-201ENST00000411092 CYP4F12Q9HCS2 524 aa5.11□□□□□ -1.59
RNU6-55P-201ENST00000411092 CUX2O14529 1486 aa5.11□□□□□ -1.59
RNU6-55P-201ENST00000411092 PRR19A6NJB7 356 aa5.1□□□□□ -1.59
RNU6-55P-201ENST00000411092 NDUFB5O43674 189 aa5.1□□□□□ -1.59
RNU6-55P-201ENST00000411092 DRD2P14416 443 aa5.1□□□□□ -1.59
RNU6-55P-201ENST00000411092 MAP4P27816 1152 aaKnown RBP5.1□□□□□ -1.59
RNU6-55P-201ENST00000411092 RXRBP28702 533 aa5.1□□□□□ -1.59
RNU6-55P-201ENST00000411092 PCDH1Q08174 1060 aa5.1□□□□□ -1.59
RNU6-55P-201ENST00000411092 ORC1Q13415 861 aa5.1□□□□□ -1.59
RNU6-55P-201ENST00000411092 ZNF423Q2M1K9 1284 aa5.1□□□□□ -1.59
RNU6-55P-201ENST00000411092 EXOSC6Q5RKV6 272 aaKnown RBP5.1□□□□□ -1.59
RNU6-55P-201ENST00000411092 RETREG2Q8NC44 543 aa5.1□□□□□ -1.59
RNU6-55P-201ENST00000411092 SHKBP1Q8TBC3 707 aa5.1□□□□□ -1.59
RNU6-55P-201ENST00000411092 CLEC4MQ9H2X3 399 aaPredicted RBP5.1□□□□□ -1.59
RNU6-55P-201ENST00000411092 SUGCTQ9HAC7 445 aa5.1□□□□□ -1.59
RNU6-55P-201ENST00000411092 RUSC2Q8N2Y8 1516 aa5.09□□□□□ -1.59
RNU6-55P-201ENST00000411092 ATAD2BQ9ULI0 1458 aa5.09□□□□□ -1.59
RNU6-55P-201ENST00000411092 KIAA1324LA8MWY0 1029 aaPredicted RBP5.09□□□□□ -1.59
RNU6-55P-201ENST00000411092 WDR64B1ANS9 1081 aa5.09□□□□□ -1.59
RNU6-55P-201ENST00000411092 TIAF1O95411 115 aa5.09□□□□□ -1.59
RNU6-55P-201ENST00000411092 NEFLP07196 543 aa5.09□□□□□ -1.59
RNU6-55P-201ENST00000411092 GRIK1P39086 918 aa5.09□□□□□ -1.59
RNU6-55P-201ENST00000411092 PDE3BQ13370 1112 aa5.09□□□□□ -1.59
RNU6-55P-201ENST00000411092 TXNDC2Q86VQ3 553 aa5.09□□□□□ -1.59
RNU6-55P-201ENST00000411092 MFSD14AQ96MC6 490 aa5.09□□□□□ -1.59
RNU6-55P-201ENST00000411092 FAM129BQ96TA1 746 aa5.09□□□□□ -1.59
RNU6-55P-201ENST00000411092 NRSN2Q9GZP1 204 aa5.09□□□□□ -1.59
RNU6-55P-201ENST00000411092 NPHS2Q9NP85 383 aa5.09□□□□□ -1.59
RNU6-55P-201ENST00000411092 PRDM2Q13029 1718 aa5.09□□□□□ -1.6
RNU6-55P-201ENST00000411092 HMGXB3Q12766 1538 aa5.08□□□□□ -1.6
RNU6-55P-201ENST00000411092 CPNE3O75131 537 aaKnown RBP5.08□□□□□ -1.6
RNU6-55P-201ENST00000411092 CTSBP07858 339 aa5.08□□□□□ -1.6
RNU6-55P-201ENST00000411092 KIAA0319Q5VV43 1072 aa5.08□□□□□ -1.6
RNU6-55P-201ENST00000411092 CDPF1Q6NVV7 123 aa5.08□□□□□ -1.6
RNU6-55P-201ENST00000411092 INTS5Q6P9B9 1019 aaKnown RBP5.08□□□□□ -1.6
RNU6-55P-201ENST00000411092 EHD4Q9H223 541 aa5.08□□□□□ -1.6
RNU6-55P-201ENST00000411092 MAP3K1Q13233 1512 aa5.07□□□□□ -1.6
RNU6-55P-201ENST00000411092 PRXQ9BXM0 1461 aa5.07□□□□□ -1.6
RNU6-55P-201ENST00000411092 RRBP1Q9P2E9 1410 aaKnown RBP5.07□□□□□ -1.6
RNU6-55P-201ENST00000411092 FAM95CA0A1B0GW59 222 aa5.07□□□□□ -1.6
RNU6-55P-201ENST00000411092 EIF4EBP3O60516 100 aaPredicted RBP5.07□□□□□ -1.6
RNU6-55P-201ENST00000411092 ADAMTS4O75173 837 aa5.07□□□□□ -1.6
RNU6-55P-201ENST00000411092 CYP11A1P05108 521 aa5.07□□□□□ -1.6
RNU6-55P-201ENST00000411092 MAOBP27338 520 aa5.07□□□□□ -1.6
RNU6-55P-201ENST00000411092 USP11P51784 963 aa5.07□□□□□ -1.6
RNU6-55P-201ENST00000411092 SOX4Q06945 474 aaPredicted RBP5.07□□□□□ -1.6
RNU6-55P-201ENST00000411092 POU4F3Q15319 338 aa5.07□□□□□ -1.6
RNU6-55P-201ENST00000411092 NFKBIBQ15653 356 aa5.07□□□□□ -1.6
RNU6-55P-201ENST00000411092 C2CD4AQ8NCU7 369 aaPredicted RBP5.07□□□□□ -1.6
RNU6-55P-201ENST00000411092 TMC1Q8TDI8 760 aa5.07□□□□□ -1.6
RNU6-55P-201ENST00000411092 FBLIM1Q8WUP2 373 aa5.07□□□□□ -1.6
RNU6-55P-201ENST00000411092 CITED4Q96RK1 184 aa5.07□□□□□ -1.6
RNU6-55P-201ENST00000411092 NIF3L1Q9GZT8 377 aa5.07□□□□□ -1.6
RNU6-55P-201ENST00000411092 GOLGA2P5Q9HBQ8 144 aa5.07□□□□□ -1.6
RNU6-55P-201ENST00000411092 RAPGEF2Q9Y4G8 1499 aa5.07□□□□□ -1.6
RNU6-55P-201ENST00000411092 EIF1AYO14602 144 aaKnown RBP5.06□□□□□ -1.6
RNU6-55P-201ENST00000411092 GPR182O15218 404 aa5.06□□□□□ -1.6
RNU6-55P-201ENST00000411092 ECEL1O95672 775 aa5.06□□□□□ -1.6
RNU6-55P-201ENST00000411092 F13BP05160 661 aa5.06□□□□□ -1.6
RNU6-55P-201ENST00000411092 SPINK2P20155 84 aa5.06□□□□□ -1.6
RNU6-55P-201ENST00000411092 SHISA5Q8N114 240 aa5.06□□□□□ -1.6
RNU6-55P-201ENST00000411092 FBXL6Q8N531 539 aa5.06□□□□□ -1.6
RNU6-55P-201ENST00000411092 CCDC74AQ96AQ1 378 aa5.06□□□□□ -1.6
RNU6-55P-201ENST00000411092 ZNF576Q9H609 170 aa5.06□□□□□ -1.6
RNU6-55P-201ENST00000411092 COL17A1Q9UMD9 1497 aaPredicted RBP5.06□□□□□ -1.6
RNU6-55P-201ENST00000411092 GADD45BO75293 160 aaPredicted RBP5.05□□□□□ -1.6
RNU6-55P-201ENST00000411092 IGHA2P01877 340 aa5.05□□□□□ -1.6
RNU6-55P-201ENST00000411092 ADH5P11766 374 aa5.05□□□□□ -1.6
RNU6-55P-201ENST00000411092 ITPKAP23677 461 aa5.05□□□□□ -1.6
RNU6-55P-201ENST00000411092 HOXA10P31260 410 aaPredicted RBP5.05□□□□□ -1.6
RNU6-55P-201ENST00000411092 GP2P55259 537 aaKnown RBP5.05□□□□□ -1.6
RNU6-55P-201ENST00000411092 PDE4CQ08493 712 aa5.05□□□□□ -1.6
RNU6-55P-201ENST00000411092 AKAP4Q5JQC9 854 aa5.05□□□□□ -1.6
RNU6-55P-201ENST00000411092 PAOXQ6QHF9 649 aa5.05□□□□□ -1.6
RNU6-55P-201ENST00000411092 DTX1Q86Y01 620 aa5.05□□□□□ -1.6
RNU6-55P-201ENST00000411092 GIMAP7Q8NHV1 300 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms