RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 HS2ST1Q7LGA3 356 aa12.64□□□□□ -0.39
PRPF40A-202ENST00000410080 DHX58Q96C10 678 aa12.64□□□□□ -0.39
PRPF40A-202ENST00000410080 ANKFY1Q9P2R3 1169 aa12.64□□□□□ -0.39
PRPF40A-202ENST00000410080 ITIH3Q06033 890 aa12.64□□□□□ -0.39
PRPF40A-202ENST00000410080 TACC3Q9Y6A5 838 aa12.64□□□□□ -0.39
PRPF40A-202ENST00000410080 KRT19P08727 400 aa12.64□□□□□ -0.39
PRPF40A-202ENST00000410080 TCP10Q12799 353 aa12.64□□□□□ -0.39
PRPF40A-202ENST00000410080 NAA25Q14CX7 972 aa12.64□□□□□ -0.39
PRPF40A-202ENST00000410080 CASC4Q6P4E1 433 aa12.64□□□□□ -0.39
PRPF40A-202ENST00000410080 TTC30AQ86WT1 665 aa12.64□□□□□ -0.39
PRPF40A-202ENST00000410080 IFT74Q96LB3 600 aa12.64□□□□□ -0.39
PRPF40A-202ENST00000410080 EYA3Q99504 573 aa12.64□□□□□ -0.39
PRPF40A-202ENST00000410080 GSDMDP57764 484 aa12.63□□□□□ -0.39
PRPF40A-202ENST00000410080 GNG11P61952 73 aa12.63□□□□□ -0.39
PRPF40A-202ENST00000410080 UBXN1Q04323 297 aa12.63□□□□□ -0.39
PRPF40A-202ENST00000410080 FCHSD1Q86WN1 690 aa12.63□□□□□ -0.39
PRPF40A-202ENST00000410080 CCDC125Q86Z20 511 aa12.63□□□□□ -0.39
PRPF40A-202ENST00000410080 MED10Q9BTT4 135 aa12.63□□□□□ -0.39
PRPF40A-202ENST00000410080 CD2APQ9Y5K6 639 aa12.63□□□□□ -0.39
PRPF40A-202ENST00000410080 EIF4G3O43432 1585 aaKnown RBP12.63□□□□□ -0.39
PRPF40A-202ENST00000410080 STK10O94804 968 aaKnown RBP12.63□□□□□ -0.39
PRPF40A-202ENST00000410080 SMTNP53814 917 aa12.63□□□□□ -0.39
PRPF40A-202ENST00000410080 KIFAP3Q92845 792 aa12.63□□□□□ -0.39
PRPF40A-202ENST00000410080 POTEB2H3BUK9 544 aa12.63□□□□□ -0.39
PRPF40A-202ENST00000410080 HSPA4P34932 840 aa12.63□□□□□ -0.39
PRPF40A-202ENST00000410080 TTC30BQ8N4P2 665 aa12.63□□□□□ -0.39
PRPF40A-202ENST00000410080 SPC25Q9HBM1 224 aa12.63□□□□□ -0.39
PRPF40A-202ENST00000410080 CCDC77Q9BR77 488 aa12.63□□□□□ -0.39
PRPF40A-202ENST00000410080 INF2Q27J81 1249 aa12.63□□□□□ -0.39
PRPF40A-202ENST00000410080 HELBQ8NG08 1087 aaPredicted RBP12.63□□□□□ -0.39
PRPF40A-202ENST00000410080 NCOA1Q15788 1441 aa12.63□□□□□ -0.39
PRPF40A-202ENST00000410080 FAM170AA1A519 330 aa12.63□□□□□ -0.39
PRPF40A-202ENST00000410080 GNAQP50148 359 aa12.63□□□□□ -0.39
PRPF40A-202ENST00000410080 PSMD6Q15008 389 aa12.63□□□□□ -0.39
PRPF40A-202ENST00000410080 SLC9C2Q5TAH2 1124 aa12.63□□□□□ -0.39
PRPF40A-202ENST00000410080 NECAB1Q8N987 351 aa12.63□□□□□ -0.39
PRPF40A-202ENST00000410080 ZKSCAN3Q9BRR0 538 aa12.63□□□□□ -0.39
PRPF40A-202ENST00000410080 FAM204AQ9H8W3 233 aa12.63□□□□□ -0.39
PRPF40A-202ENST00000410080 RBM27Q9P2N5 1060 aaKnown RBP12.63□□□□□ -0.39
PRPF40A-202ENST00000410080 SCAF11Q99590 1463 aaKnown RBP12.63□□□□□ -0.39
PRPF40A-202ENST00000410080 ITSN2Q9NZM3 1697 aa12.62□□□□□ -0.39
PRPF40A-202ENST00000410080 TBC1D9Q6ZT07 1266 aa12.62□□□□□ -0.39
PRPF40A-202ENST00000410080 IFT81Q8WYA0 676 aa12.62□□□□□ -0.39
PRPF40A-202ENST00000410080 CTAGE1Q96RT6 745 aa12.62□□□□□ -0.39
PRPF40A-202ENST00000410080 PLCG2P16885 1265 aa12.62□□□□□ -0.39
PRPF40A-202ENST00000410080 GTF2F1P35269 517 aaKnown RBP eCLIP12.62□□□□□ -0.39
PRPF40A-202ENST00000410080 PLCB4Q15147 1175 aa12.62□□□□□ -0.39
PRPF40A-202ENST00000410080 SKA2Q8WVK7 121 aaPredicted RBP12.62□□□□□ -0.39
PRPF40A-202ENST00000410080 STMN4Q9H169 189 aaPredicted RBP12.62□□□□□ -0.39
PRPF40A-202ENST00000410080 ECHDC1Q9NTX5 307 aa12.62□□□□□ -0.39
PRPF40A-202ENST00000410080 ZRANB1Q9UGI0 708 aa12.62□□□□□ -0.39
PRPF40A-202ENST00000410080 CTAGE9A4FU28 777 aa12.62□□□□□ -0.39
PRPF40A-202ENST00000410080 DYNC1I1O14576 645 aa12.62□□□□□ -0.39
PRPF40A-202ENST00000410080 PARP1P09874 1014 aaKnown RBP12.62□□□□□ -0.39
PRPF40A-202ENST00000410080 COPS6Q7L5N1 327 aa12.62□□□□□ -0.39
PRPF40A-202ENST00000410080 USP25Q9UHP3 1055 aa12.62□□□□□ -0.39
PRPF40A-202ENST00000410080 PSMA7O14818 248 aa12.62□□□□□ -0.39
PRPF40A-202ENST00000410080 ABCC11Q96J66 1382 aa12.62□□□□□ -0.39
PRPF40A-202ENST00000410080 H0YIN7 160 aa12.62□□□□□ -0.39
PRPF40A-202ENST00000410080 Q6ZUG5 572 aa12.62□□□□□ -0.39
PRPF40A-202ENST00000410080 RXRAP19793 462 aa12.62□□□□□ -0.39
PRPF40A-202ENST00000410080 UBLCP1Q8WVY7 318 aaPredicted RBP12.62□□□□□ -0.39
PRPF40A-202ENST00000410080 CARD10Q9BWT7 1032 aa12.62□□□□□ -0.39
PRPF40A-202ENST00000410080 ADCY5O95622 1261 aa12.61□□□□□ -0.39
PRPF40A-202ENST00000410080 OATP04181 439 aa12.61□□□□□ -0.39
PRPF40A-202ENST00000410080 EPB41P11171 864 aaKnown RBP12.61□□□□□ -0.39
PRPF40A-202ENST00000410080 PPFIA1Q13136 1202 aa12.61□□□□□ -0.39
PRPF40A-202ENST00000410080 TSTA3Q13630 321 aaPredicted RBP12.61□□□□□ -0.39
PRPF40A-202ENST00000410080 DTHD1Q6ZMT9 781 aa12.61□□□□□ -0.39
PRPF40A-202ENST00000410080 TMTC2Q8N394 836 aa12.61□□□□□ -0.39
PRPF40A-202ENST00000410080 GOLGA6CA6NDK9 693 aa12.61□□□□□ -0.39
PRPF40A-202ENST00000410080 GOLGA6BA6NDN3 693 aa12.61□□□□□ -0.39
PRPF40A-202ENST00000410080 GOLGA6DP0CG33 693 aa12.61□□□□□ -0.39
PRPF40A-202ENST00000410080 JAKMIP2Q96AA8 810 aa12.61□□□□□ -0.39
PRPF40A-202ENST00000410080 GOLGA6AQ9NYA3 693 aa12.61□□□□□ -0.39
PRPF40A-202ENST00000410080 RAPGEF6Q8TEU7 1601 aa12.61□□□□□ -0.39
PRPF40A-202ENST00000410080 KRT79Q5XKE5 535 aa12.61□□□□□ -0.39
PRPF40A-202ENST00000410080 KIF9Q9HAQ2 790 aa12.61□□□□□ -0.39
PRPF40A-202ENST00000410080 KDM5BQ9UGL1 1544 aa12.61□□□□□ -0.39
PRPF40A-202ENST00000410080 GADL1Q6ZQY3 521 aa12.61□□□□□ -0.39
PRPF40A-202ENST00000410080 LMBR1Q8WVP7 490 aa12.61□□□□□ -0.39
PRPF40A-202ENST00000410080 DNAJC5BQ9UF47 199 aa12.61□□□□□ -0.39
PRPF40A-202ENST00000410080 HSPA2P54652 639 aa12.6□□□□□ -0.39
PRPF40A-202ENST00000410080 TCEANC2Q96MN5 208 aa12.6□□□□□ -0.39
PRPF40A-202ENST00000410080 CCDC129Q6ZRS4 1044 aa12.6□□□□□ -0.39
PRPF40A-202ENST00000410080 CPXCR1Q8N123 301 aa12.6□□□□□ -0.39
PRPF40A-202ENST00000410080 CCDC110Q8TBZ0 833 aa12.6□□□□□ -0.39
PRPF40A-202ENST00000410080 RTL9Q8NET4 1388 aa12.6□□□□□ -0.39
PRPF40A-202ENST00000410080 CCT6AP40227 531 aaKnown RBP12.6□□□□□ -0.39
PRPF40A-202ENST00000410080 DNAJC21Q5F1R6 531 aaKnown RBP12.6□□□□□ -0.39
PRPF40A-202ENST00000410080 UFL1O94874 794 aa12.6□□□□□ -0.39
PRPF40A-202ENST00000410080 PA2G4Q9UQ80 394 aaKnown RBP12.6□□□□□ -0.39
PRPF40A-202ENST00000410080 PRPF6O94906 941 aaKnown RBP12.6□□□□□ -0.39
PRPF40A-202ENST00000410080 LARGE2Q8N3Y3 721 aa12.6□□□□□ -0.39
PRPF40A-202ENST00000410080 NFATC2IPQ8NCF5 419 aa12.6□□□□□ -0.39
PRPF40A-202ENST00000410080 NBPF3Q9H094 633 aa12.6□□□□□ -0.39
PRPF40A-202ENST00000410080 CCDC170Q8IYT3 715 aa12.6□□□□□ -0.39
PRPF40A-202ENST00000410080 ATRIPQ8WXE1 791 aa12.6□□□□□ -0.39
PRPF40A-202ENST00000410080 SH2D4AQ9H788 454 aa12.6□□□□□ -0.39
PRPF40A-202ENST00000410080 PRKAG2Q9UGJ0 569 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms