RNA–Protein interactions for RNA: ENST00000409987.5

LSM5-206, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-206ENST00000409987 BCRP11274 1271 aa7.99□□□□□ -1.13
LSM5-206ENST00000409987 DNAJA1P31689 397 aaKnown RBP7.99□□□□□ -1.13
LSM5-206ENST00000409987 LMNB2Q03252 620 aa7.99□□□□□ -1.13
LSM5-206ENST00000409987 CAMK2GQ13555 558 aaPredicted RBP7.99□□□□□ -1.13
LSM5-206ENST00000409987 LYPD4Q6UWN0 246 aa7.99□□□□□ -1.13
LSM5-206ENST00000409987 SULF2Q8IWU5 870 aa7.99□□□□□ -1.13
LSM5-206ENST00000409987 EAF1Q96JC9 268 aaPredicted RBP7.99□□□□□ -1.13
LSM5-206ENST00000409987 GMLQ99445 158 aa7.99□□□□□ -1.13
LSM5-206ENST00000409987 TANGO6Q9C0B7 1094 aa7.99□□□□□ -1.13
LSM5-206ENST00000409987 PPME1Q9Y570 386 aa7.99□□□□□ -1.13
LSM5-206ENST00000409987 PCDHB5Q9Y5E4 795 aa7.99□□□□□ -1.13
LSM5-206ENST00000409987 LINC01387J3KSC0 135 aa7.98□□□□□ -1.13
LSM5-206ENST00000409987 CELA2BP08218 269 aaPredicted RBP7.98□□□□□ -1.13
LSM5-206ENST00000409987 RASGRP4Q8TDF6 673 aa7.98□□□□□ -1.13
LSM5-206ENST00000409987 PPP1R1BQ9UD71 204 aaPredicted RBP7.98□□□□□ -1.13
LSM5-206ENST00000409987 PRKAG2Q9UGJ0 569 aa7.98□□□□□ -1.13
LSM5-206ENST00000409987 SAMM50Q9Y512 469 aa7.98□□□□□ -1.13
LSM5-206ENST00000409987 GREM1O60565 184 aa7.97□□□□□ -1.13
LSM5-206ENST00000409987 ARNTP27540 789 aa7.97□□□□□ -1.13
LSM5-206ENST00000409987 ARID5AQ03989 594 aa7.97□□□□□ -1.13
LSM5-206ENST00000409987 COL9A3Q14050 684 aaPredicted RBP7.97□□□□□ -1.13
LSM5-206ENST00000409987 SNAP47Q5SQN1 464 aa7.97□□□□□ -1.13
LSM5-206ENST00000409987 MSL1Q68DK7 614 aa7.97□□□□□ -1.13
LSM5-206ENST00000409987 PDZD3Q86UT5 571 aa7.97□□□□□ -1.13
LSM5-206ENST00000409987 WFDC8Q8IUA0 241 aa7.97□□□□□ -1.13
LSM5-206ENST00000409987 GOLM1Q8NBJ4 401 aa7.97□□□□□ -1.13
LSM5-206ENST00000409987 GRIN3AQ8TCU5 1115 aa7.97□□□□□ -1.13
LSM5-206ENST00000409987 WHAMMQ8TF30 809 aa7.97□□□□□ -1.13
LSM5-206ENST00000409987 SLC7A3Q8WY07 619 aa7.97□□□□□ -1.13
LSM5-206ENST00000409987 SOX17Q9H6I2 414 aaPredicted RBP7.97□□□□□ -1.13
LSM5-206ENST00000409987 PRDM6Q9NQX0 595 aa7.97□□□□□ -1.13
LSM5-206ENST00000409987 LRRC4BQ9NT99 713 aa7.97□□□□□ -1.13
LSM5-206ENST00000409987 SUPT16HQ9Y5B9 1047 aaKnown RBP7.97□□□□□ -1.13
LSM5-206ENST00000409987 SHROOM4Q9ULL8 1493 aa7.96□□□□□ -1.13
LSM5-206ENST00000409987 ATF4P18848 351 aaPredicted RBP7.96□□□□□ -1.14
LSM5-206ENST00000409987 PIP4K2BP78356 416 aa7.96□□□□□ -1.14
LSM5-206ENST00000409987 LCE2AQ5TA79 106 aaPredicted RBP7.96□□□□□ -1.14
LSM5-206ENST00000409987 TREML4Q6UXN2 200 aa7.96□□□□□ -1.14
LSM5-206ENST00000409987 ILDR2Q71H61 639 aa7.96□□□□□ -1.14
LSM5-206ENST00000409987 TRIM42Q8IWZ5 723 aa7.96□□□□□ -1.14
LSM5-206ENST00000409987 NT5C1AQ9BXI3 368 aa7.96□□□□□ -1.14
LSM5-206ENST00000409987 CYP8B1Q9UNU6 501 aa7.96□□□□□ -1.14
LSM5-206ENST00000409987 TM4SF5O14894 197 aa7.95□□□□□ -1.14
LSM5-206ENST00000409987 FSCN2O14926 492 aa7.95□□□□□ -1.14
LSM5-206ENST00000409987 WFS1O76024 890 aa7.95□□□□□ -1.14
LSM5-206ENST00000409987 FGRP09769 529 aa7.95□□□□□ -1.14
LSM5-206ENST00000409987 NID1P14543 1247 aa7.95□□□□□ -1.14
LSM5-206ENST00000409987 AMPD1P23109 780 aa7.95□□□□□ -1.14
LSM5-206ENST00000409987 GSTM4Q03013 218 aa7.95□□□□□ -1.14
LSM5-206ENST00000409987 ZNF252P-AS1Q0IIN9 211 aa7.95□□□□□ -1.14
LSM5-206ENST00000409987 C19orf57Q0VDD7 668 aa7.95□□□□□ -1.14
LSM5-206ENST00000409987 SEPT6Q14141 434 aa7.95□□□□□ -1.14
LSM5-206ENST00000409987 LLGL2Q6P1M3 1020 aa7.95□□□□□ -1.14
LSM5-206ENST00000409987 BNC2Q6ZN30 1099 aaPredicted RBP7.95□□□□□ -1.14
LSM5-206ENST00000409987 VPS37DQ86XT2 251 aa7.95□□□□□ -1.14
LSM5-206ENST00000409987 DDX54Q8TDD1 881 aaKnown RBP7.95□□□□□ -1.14
LSM5-206ENST00000409987 UBXN4Q92575 508 aa7.95□□□□□ -1.14
LSM5-206ENST00000409987 WNT8BQ93098 351 aa7.95□□□□□ -1.14
LSM5-206ENST00000409987 GAL3ST3Q96A11 431 aa7.95□□□□□ -1.14
LSM5-206ENST00000409987 NRSN2Q9GZP1 204 aa7.95□□□□□ -1.14
LSM5-206ENST00000409987 CBX8Q9HC52 389 aa7.95□□□□□ -1.14
LSM5-206ENST00000409987 UBP1Q9NZI7 540 aa7.95□□□□□ -1.14
LSM5-206ENST00000409987 F13A1P00488 732 aa7.94□□□□□ -1.14
LSM5-206ENST00000409987 HOXB4P17483 251 aaPredicted RBP7.94□□□□□ -1.14
LSM5-206ENST00000409987 CRKP46108 304 aa7.94□□□□□ -1.14
LSM5-206ENST00000409987 AP3B2Q13367 1082 aa7.94□□□□□ -1.14
LSM5-206ENST00000409987 LRRC14Q15048 493 aa7.94□□□□□ -1.14
LSM5-206ENST00000409987 FAM117BQ6P1L5 589 aa7.94□□□□□ -1.14
LSM5-206ENST00000409987 MPRIPQ6WCQ1 1025 aa7.94□□□□□ -1.14
LSM5-206ENST00000409987 FAM196AQ6ZSG2 479 aa7.94□□□□□ -1.14
LSM5-206ENST00000409987 MCF2L2Q86YR7 1114 aa7.94□□□□□ -1.14
LSM5-206ENST00000409987 CARD10Q9BWT7 1032 aa7.94□□□□□ -1.14
LSM5-206ENST00000409987 EMILIN2Q9BXX0 1053 aa7.94□□□□□ -1.14
LSM5-206ENST00000409987 MIR1-1HGQ9H1L0 117 aa7.94□□□□□ -1.14
LSM5-206ENST00000409987 OSGEPQ9NPF4 335 aa7.94□□□□□ -1.14
LSM5-206ENST00000409987 LOC100996750A0A140TA64 210 aa7.93□□□□□ -1.14
LSM5-206ENST00000409987 FAM221AA4D161 298 aa7.93□□□□□ -1.14
LSM5-206ENST00000409987 ECEL1O95672 775 aa7.93□□□□□ -1.14
LSM5-206ENST00000409987 GSTP1P09211 210 aaKnown RBP7.93□□□□□ -1.14
LSM5-206ENST00000409987 LMNB1P20700 586 aa7.93□□□□□ -1.14
LSM5-206ENST00000409987 DGKGP49619 791 aa7.93□□□□□ -1.14
LSM5-206ENST00000409987 ARL4DP49703 201 aa7.93□□□□□ -1.14
LSM5-206ENST00000409987 PTPN11Q06124 597 aaPredicted RBP7.93□□□□□ -1.14
LSM5-206ENST00000409987 SETDB1Q15047 1291 aa7.93□□□□□ -1.14
LSM5-206ENST00000409987 CCDC84Q86UT8 332 aaPredicted RBP7.93□□□□□ -1.14
LSM5-206ENST00000409987 DMRTC2Q8IXT2 367 aaPredicted RBP7.93□□□□□ -1.14
LSM5-206ENST00000409987 FBXO27Q8NI29 283 aa7.93□□□□□ -1.14
LSM5-206ENST00000409987 DHX38Q92620 1227 aaKnown RBP7.93□□□□□ -1.14
LSM5-206ENST00000409987 JARID2Q92833 1246 aaPredicted RBP7.93□□□□□ -1.14
LSM5-206ENST00000409987 KLHDC7BQ96G42 594 aa7.93□□□□□ -1.14
LSM5-206ENST00000409987 KRTAP4-6Q9BYQ5 205 aa7.93□□□□□ -1.14
LSM5-206ENST00000409987 GINM1Q9NU53 330 aa7.93□□□□□ -1.14
LSM5-206ENST00000409987 TLR3O15455 904 aaKnown RBP7.92□□□□□ -1.14
LSM5-206ENST00000409987 ATP2B1P20020 1258 aa7.92□□□□□ -1.14
LSM5-206ENST00000409987 APOBRQ0VD83 1088 aa7.92□□□□□ -1.14
LSM5-206ENST00000409987 ZNF385CQ66K41 422 aaPredicted RBP7.92□□□□□ -1.14
LSM5-206ENST00000409987 GALNT11Q8NCW6 608 aa7.92□□□□□ -1.14
LSM5-206ENST00000409987 GATAD2BQ8WXI9 593 aa7.92□□□□□ -1.14
LSM5-206ENST00000409987 SEC16BQ96JE7 1060 aa7.92□□□□□ -1.14
LSM5-206ENST00000409987 CACNA2D2Q9NY47 1150 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms