RNA–Protein interactions for RNA: ENST00000409881.1

MINDY4-202, Transcript of MINDY lysine 48 deubiquitinase 4, humanhuman

TSL 2

Gene MINDY4, Length 2,488 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY4-202ENST00000409881 ARID4AP29374 1257 aaPredicted RBP17■□□□□ 0.31
MINDY4-202ENST00000409881 MCAMP43121 646 aa17■□□□□ 0.31
MINDY4-202ENST00000409881 FKBP4Q02790 459 aaKnown RBP eCLIP17■□□□□ 0.31
MINDY4-202ENST00000409881 C15orf52Q6ZUT6 534 aaKnown RBP17■□□□□ 0.31
MINDY4-202ENST00000409881 RILPL2Q969X0 211 aa17■□□□□ 0.31
MINDY4-202ENST00000409881 RTFDC1Q9BY42 306 aaPredicted RBP17■□□□□ 0.31
MINDY4-202ENST00000409881 RASGRF1Q13972 1273 aa16.99■□□□□ 0.31
MINDY4-202ENST00000409881 SUPT20HQ8NEM7 779 aa16.99■□□□□ 0.31
MINDY4-202ENST00000409881 TSC1Q92574 1164 aa16.99■□□□□ 0.31
MINDY4-202ENST00000409881 ZNF512BQ96KM6 892 aaPredicted RBP16.99■□□□□ 0.31
MINDY4-202ENST00000409881 HAUS7Q99871 368 aa16.99■□□□□ 0.31
MINDY4-202ENST00000409881 A0A0U1RQG5 324 aaPredicted RBP16.99■□□□□ 0.31
MINDY4-202ENST00000409881 SDSP20132 328 aa16.99■□□□□ 0.31
MINDY4-202ENST00000409881 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.99■□□□□ 0.31
MINDY4-202ENST00000409881 EDC3Q96F86 508 aaKnown RBP16.99■□□□□ 0.31
MINDY4-202ENST00000409881 CCDC94Q9BW85 323 aaPredicted RBP16.99■□□□□ 0.31
MINDY4-202ENST00000409881 GOLGB1Q14789 3259 aaKnown RBP16.99■□□□□ 0.31
MINDY4-202ENST00000409881 SRCAPQ6ZRS2 3230 aa16.99■□□□□ 0.31
MINDY4-202ENST00000409881 G3V3G9 751 aa16.98■□□□□ 0.31
MINDY4-202ENST00000409881 GOLIM4O00461 696 aa16.98■□□□□ 0.31
MINDY4-202ENST00000409881 ZAP70P43403 619 aa16.98■□□□□ 0.31
MINDY4-202ENST00000409881 DNTTIP2Q5QJE6 756 aaKnown RBP16.98■□□□□ 0.31
MINDY4-202ENST00000409881 DCAF8Q5TAQ9 597 aa16.98■□□□□ 0.31
MINDY4-202ENST00000409881 SPATA5Q8NB90 893 aa16.98■□□□□ 0.31
MINDY4-202ENST00000409881 PSMD1Q99460 953 aa16.98■□□□□ 0.31
MINDY4-202ENST00000409881 HMG20BQ9P0W2 317 aa16.98■□□□□ 0.31
MINDY4-202ENST00000409881 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.98■□□□□ 0.31
MINDY4-202ENST00000409881 ST18O60284 1047 aa16.97■□□□□ 0.31
MINDY4-202ENST00000409881 KIAA2012Q0VF49 1180 aa16.97■□□□□ 0.31
MINDY4-202ENST00000409881 AOC3Q16853 763 aa16.97■□□□□ 0.31
MINDY4-202ENST00000409881 DOK7Q18PE1 504 aa16.97■□□□□ 0.31
MINDY4-202ENST00000409881 CNTROBQ8N137 903 aa16.97■□□□□ 0.31
MINDY4-202ENST00000409881 ZNF277Q9NRM2 450 aaPredicted RBP16.97■□□□□ 0.31
MINDY4-202ENST00000409881 PPIP5K2O43314 1243 aa16.97■□□□□ 0.31
MINDY4-202ENST00000409881 TAOK3Q9H2K8 898 aa16.97■□□□□ 0.31
MINDY4-202ENST00000409881 CD209Q9NNX6 404 aa16.97■□□□□ 0.31
MINDY4-202ENST00000409881 PAG1Q9NWQ8 432 aa16.97■□□□□ 0.31
MINDY4-202ENST00000409881 CHAF1AQ13111 956 aaPredicted RBP16.96■□□□□ 0.31
MINDY4-202ENST00000409881 JAG2Q9Y219 1238 aa16.96■□□□□ 0.31
MINDY4-202ENST00000409881 DBNDD1Q9H9R9 158 aa16.96■□□□□ 0.31
MINDY4-202ENST00000409881 DENND2AQ9ULE3 1009 aa16.96■□□□□ 0.31
MINDY4-202ENST00000409881 COL1A1P02452 1464 aaPredicted RBP16.96■□□□□ 0.31
MINDY4-202ENST00000409881 ARFGEF1Q9Y6D6 1849 aa16.95■□□□□ 0.3
MINDY4-202ENST00000409881 NFKBIEO00221 500 aa16.95■□□□□ 0.3
MINDY4-202ENST00000409881 EVI5LQ96CN4 794 aa16.95■□□□□ 0.3
MINDY4-202ENST00000409881 COA1Q9GZY4 146 aa16.95■□□□□ 0.3
MINDY4-202ENST00000409881 SEMA3EO15041 775 aa16.95■□□□□ 0.3
MINDY4-202ENST00000409881 MYRIPQ8NFW9 859 aa16.95■□□□□ 0.3
MINDY4-202ENST00000409881 TDRD7Q8NHU6 1098 aaKnown RBP16.95■□□□□ 0.3
MINDY4-202ENST00000409881 ZNF830Q96NB3 372 aaPredicted RBP16.95■□□□□ 0.3
MINDY4-202ENST00000409881 FSD1Q9BTV5 496 aa16.95■□□□□ 0.3
MINDY4-202ENST00000409881 DMTNQ08495 405 aa16.94■□□□□ 0.3
MINDY4-202ENST00000409881 LARGE2Q8N3Y3 721 aa16.94■□□□□ 0.3
MINDY4-202ENST00000409881 AKAP11Q9UKA4 1901 aa16.94■□□□□ 0.3
MINDY4-202ENST00000409881 IL1R1P14778 569 aa16.94■□□□□ 0.3
MINDY4-202ENST00000409881 RASSF7Q02833 373 aa16.94■□□□□ 0.3
MINDY4-202ENST00000409881 ARHGAP27Q6ZUM4 889 aa16.94■□□□□ 0.3
MINDY4-202ENST00000409881 FER1L6Q2WGJ9 1857 aa16.93■□□□□ 0.3
MINDY4-202ENST00000409881 ZSCAN20P17040 1043 aaPredicted RBP16.93■□□□□ 0.3
MINDY4-202ENST00000409881 FBXW7Q969H0 707 aa16.93■□□□□ 0.3
MINDY4-202ENST00000409881 TSPY26PQ9H489 355 aa16.93■□□□□ 0.3
MINDY4-202ENST00000409881 ECE2O60344 883 aa16.93■□□□□ 0.3
MINDY4-202ENST00000409881 MBD3O95983 291 aa16.93■□□□□ 0.3
MINDY4-202ENST00000409881 YBX3P16989 372 aaKnown RBP eCLIP16.93■□□□□ 0.3
MINDY4-202ENST00000409881 ZNF710Q8N1W2 664 aa16.93■□□□□ 0.3
MINDY4-202ENST00000409881 PIH1D3Q9NQM4 214 aaKnown RBP16.93■□□□□ 0.3
MINDY4-202ENST00000409881 IARSP41252 1262 aaKnown RBP16.92■□□□□ 0.3
MINDY4-202ENST00000409881 MYH13Q9UKX3 1938 aa16.92■□□□□ 0.3
MINDY4-202ENST00000409881 CBX1P83916 185 aa16.92■□□□□ 0.3
MINDY4-202ENST00000409881 TTF1Q15361 905 aaPredicted RBP16.92■□□□□ 0.3
MINDY4-202ENST00000409881 KBTBD3Q8NAB2 608 aa16.92■□□□□ 0.3
MINDY4-202ENST00000409881 ABCF2Q9UG63 623 aa16.92■□□□□ 0.3
MINDY4-202ENST00000409881 IDH1O75874 414 aaKnown RBP16.91■□□□□ 0.3
MINDY4-202ENST00000409881 C17orf53Q8N3J3 647 aaPredicted RBP16.91■□□□□ 0.3
MINDY4-202ENST00000409881 GTF2IP78347 998 aa16.91■□□□□ 0.3
MINDY4-202ENST00000409881 FOXD4L6Q3SYB3 417 aaPredicted RBP16.91■□□□□ 0.3
MINDY4-202ENST00000409881 UTP14CQ5TAP6 766 aaKnown RBP16.91■□□□□ 0.3
MINDY4-202ENST00000409881 FOXD4L3Q6VB84 417 aaPredicted RBP16.91■□□□□ 0.3
MINDY4-202ENST00000409881 PODNQ7Z5L7 613 aa16.91■□□□□ 0.3
MINDY4-202ENST00000409881 PDS5AQ29RF7 1337 aaKnown RBP16.9■□□□□ 0.3
MINDY4-202ENST00000409881 LTBP3Q9NS15 1303 aa16.9■□□□□ 0.3
MINDY4-202ENST00000409881 NIM1KQ8IY84 436 aa16.9■□□□□ 0.3
MINDY4-202ENST00000409881 VPS33BQ9H267 617 aa16.9■□□□□ 0.3
MINDY4-202ENST00000409881 LRP2BPQ9P2M1 347 aa16.9■□□□□ 0.3
MINDY4-202ENST00000409881 GPR162Q16538 588 aa16.9■□□□□ 0.3
MINDY4-202ENST00000409881 WDR66Q8TBY9 1149 aa16.9■□□□□ 0.3
MINDY4-202ENST00000409881 KCNQ5Q9NR82 932 aa16.9■□□□□ 0.3
MINDY4-202ENST00000409881 COL4A5P29400 1685 aa16.9■□□□□ 0.3
MINDY4-202ENST00000409881 CASC1Q6TDU7 716 aa16.89■□□□□ 0.29
MINDY4-202ENST00000409881 DIAPH3Q9NSV4 1193 aa16.89■□□□□ 0.29
MINDY4-202ENST00000409881 CHGBP05060 677 aa16.89■□□□□ 0.29
MINDY4-202ENST00000409881 RAI14Q9P0K7 980 aa16.89■□□□□ 0.29
MINDY4-202ENST00000409881 CHD4Q14839 1912 aa16.89■□□□□ 0.29
MINDY4-202ENST00000409881 ZBTB22O15209 634 aa16.88■□□□□ 0.29
MINDY4-202ENST00000409881 CHMLP26374 656 aa16.88■□□□□ 0.29
MINDY4-202ENST00000409881 NOLC1Q14978 699 aaKnown RBP eCLIP16.88■□□□□ 0.29
MINDY4-202ENST00000409881 TTLL5Q6EMB2 1281 aa16.88■□□□□ 0.29
MINDY4-202ENST00000409881 JDP2Q8WYK2 163 aa16.88■□□□□ 0.29
MINDY4-202ENST00000409881 TMX3Q96JJ7 454 aa16.88■□□□□ 0.29
MINDY4-202ENST00000409881 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms