RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 NAA16Q6N069 864 aaPredicted RBP14.88□□□□□ -0.03
CHMP3-204ENST00000409727 PDS5AQ29RF7 1337 aaKnown RBP14.87□□□□□ -0.03
CHMP3-204ENST00000409727 G3V3G9 751 aa14.87□□□□□ -0.03
CHMP3-204ENST00000409727 K7ELQ4 463 aaPredicted RBP14.87□□□□□ -0.03
CHMP3-204ENST00000409727 CYP21A2P08686 494 aa14.87□□□□□ -0.03
CHMP3-204ENST00000409727 DCAF8Q5TAQ9 597 aa14.87□□□□□ -0.03
CHMP3-204ENST00000409727 LCORLQ8N3X6 602 aa14.87□□□□□ -0.03
CHMP3-204ENST00000409727 TTLL6Q8N841 843 aa14.87□□□□□ -0.03
CHMP3-204ENST00000409727 ZNF384Q8TF68 577 aa14.87□□□□□ -0.03
CHMP3-204ENST00000409727 KCNB2Q92953 911 aa14.87□□□□□ -0.03
CHMP3-204ENST00000409727 SLKQ9H2G2 1235 aaPredicted RBP14.87□□□□□ -0.03
CHMP3-204ENST00000409727 FOXD4L1Q9NU39 408 aa14.87□□□□□ -0.03
CHMP3-204ENST00000409727 IL1R1P14778 569 aa14.86□□□□□ -0.03
CHMP3-204ENST00000409727 HAND2P61296 217 aa14.86□□□□□ -0.03
CHMP3-204ENST00000409727 DZIP1Q86YF9 867 aaKnown RBP14.86□□□□□ -0.03
CHMP3-204ENST00000409727 WDR66Q8TBY9 1149 aa14.86□□□□□ -0.03
CHMP3-204ENST00000409727 NSUN4Q96CB9 384 aaKnown RBP14.86□□□□□ -0.03
CHMP3-204ENST00000409727 IL17RAQ96F46 866 aa14.86□□□□□ -0.03
CHMP3-204ENST00000409727 STRBPQ96SI9 672 aaKnown RBP14.86□□□□□ -0.03
CHMP3-204ENST00000409727 FGAP02671 866 aa14.86□□□□□ -0.03
CHMP3-204ENST00000409727 COL9A3Q14050 684 aaPredicted RBP14.86□□□□□ -0.03
CHMP3-204ENST00000409727 GRIK5Q16478 980 aa14.86□□□□□ -0.03
CHMP3-204ENST00000409727 MAGEB6P1A0A0J9YX57 407 aa14.85□□□□□ -0.03
CHMP3-204ENST00000409727 PRKAB2O43741 272 aa14.85□□□□□ -0.03
CHMP3-204ENST00000409727 LDHBP07195 334 aaKnown RBP14.85□□□□□ -0.03
CHMP3-204ENST00000409727 HSP90AA1P07900 732 aaKnown RBP14.85□□□□□ -0.03
CHMP3-204ENST00000409727 KCNA3P22001 575 aa14.85□□□□□ -0.03
CHMP3-204ENST00000409727 GTF2IP78347 998 aa14.85□□□□□ -0.03
CHMP3-204ENST00000409727 ZGPATQ8N5A5 531 aaKnown RBP14.85□□□□□ -0.03
CHMP3-204ENST00000409727 C7orf43Q8WVR3 580 aa14.85□□□□□ -0.03
CHMP3-204ENST00000409727 EYA3Q99504 573 aa14.85□□□□□ -0.03
CHMP3-204ENST00000409727 LARP6Q9BRS8 491 aaKnown RBP14.85□□□□□ -0.03
CHMP3-204ENST00000409727 COA1Q9GZY4 146 aa14.85□□□□□ -0.03
CHMP3-204ENST00000409727 DBNDD1Q9H9R9 158 aa14.85□□□□□ -0.03
CHMP3-204ENST00000409727 SLC4A4Q9Y6R1 1079 aa14.85□□□□□ -0.03
CHMP3-204ENST00000409727 DYNLL1P63167 89 aaKnown RBP14.84□□□□□ -0.03
CHMP3-204ENST00000409727 MFSD14BQ5SR56 506 aa14.84□□□□□ -0.03
CHMP3-204ENST00000409727 SPTY2D1Q68D10 685 aaPredicted RBP14.84□□□□□ -0.03
CHMP3-204ENST00000409727 TCEANC2Q96MN5 208 aa14.84□□□□□ -0.03
CHMP3-204ENST00000409727 CYP46A1Q9Y6A2 500 aa14.84□□□□□ -0.03
CHMP3-204ENST00000409727 GOLGB1Q14789 3259 aaKnown RBP14.84□□□□□ -0.03
CHMP3-204ENST00000409727 PSMA5P28066 241 aa14.84□□□□□ -0.03
CHMP3-204ENST00000409727 ZSWIM6Q9HCJ5 1215 aa14.84□□□□□ -0.03
CHMP3-204ENST00000409727 PDRG1Q9NUG6 133 aa14.84□□□□□ -0.03
CHMP3-204ENST00000409727 AATFQ9NY61 560 aaKnown RBP eCLIP14.84□□□□□ -0.03
CHMP3-204ENST00000409727 CTNNA3Q9UI47 895 aa14.84□□□□□ -0.03
CHMP3-204ENST00000409727 DLEC1Q9Y238 1755 aa14.83□□□□□ -0.03
CHMP3-204ENST00000409727 SALL1Q9NSC2 1324 aa14.83□□□□□ -0.03
CHMP3-204ENST00000409727 DIXDC1Q155Q3 683 aa14.83□□□□□ -0.04
CHMP3-204ENST00000409727 AOC3Q16853 763 aa14.83□□□□□ -0.04
CHMP3-204ENST00000409727 IMMTQ16891 758 aaKnown RBP14.83□□□□□ -0.04
CHMP3-204ENST00000409727 BLOC1S2Q6QNY1 142 aa14.83□□□□□ -0.04
CHMP3-204ENST00000409727 STOX1Q6ZVD7 989 aa14.83□□□□□ -0.04
CHMP3-204ENST00000409727 RUFY3Q7L099 469 aa14.83□□□□□ -0.04
CHMP3-204ENST00000409727 SDR42E1Q8WUS8 393 aa14.83□□□□□ -0.04
CHMP3-204ENST00000409727 RPAP1Q9BWH6 1393 aaPredicted RBP14.83□□□□□ -0.04
CHMP3-204ENST00000409727 PATL2C9JE40 543 aaKnown RBP14.82□□□□□ -0.04
CHMP3-204ENST00000409727 AK2P54819 239 aa14.82□□□□□ -0.04
CHMP3-204ENST00000409727 KRT32Q14532 448 aa14.82□□□□□ -0.04
CHMP3-204ENST00000409727 MXD3Q9BW11 206 aa14.82□□□□□ -0.04
CHMP3-204ENST00000409727 TM6SF1Q9BZW5 370 aa14.82□□□□□ -0.04
CHMP3-204ENST00000409727 EPB41L4AQ9HCS5 686 aaPredicted RBP14.82□□□□□ -0.04
CHMP3-204ENST00000409727 KIF13BQ9NQT8 1826 aa14.82□□□□□ -0.04
CHMP3-204ENST00000409727 GSG1L2A8MUP6 293 aa14.82□□□□□ -0.04
CHMP3-204ENST00000409727 ZNF213O14771 459 aa14.82□□□□□ -0.04
CHMP3-204ENST00000409727 TDO2P48775 406 aa14.82□□□□□ -0.04
CHMP3-204ENST00000409727 TGFB2P61812 414 aa14.82□□□□□ -0.04
CHMP3-204ENST00000409727 TSGA10IPQ3SY00 556 aa14.82□□□□□ -0.04
CHMP3-204ENST00000409727 IFNL3Q8IZI9 196 aa14.82□□□□□ -0.04
CHMP3-204ENST00000409727 TTC14Q96N46 770 aa14.82□□□□□ -0.04
CHMP3-204ENST00000409727 NEK1Q96PY6 1258 aa14.82□□□□□ -0.04
CHMP3-204ENST00000409727 RIOK1Q9BRS2 568 aaKnown RBP14.82□□□□□ -0.04
CHMP3-204ENST00000409727 NAPBQ9H115 298 aa14.82□□□□□ -0.04
CHMP3-204ENST00000409727 KCNQ5Q9NR82 932 aa14.82□□□□□ -0.04
CHMP3-204ENST00000409727 PIM2Q9P1W9 311 aa14.82□□□□□ -0.04
CHMP3-204ENST00000409727 E7EWF7 191 aa14.81□□□□□ -0.04
CHMP3-204ENST00000409727 F8W031 263 aaPredicted RBP14.81□□□□□ -0.04
CHMP3-204ENST00000409727 ZBTB22O15209 634 aa14.81□□□□□ -0.04
CHMP3-204ENST00000409727 PTGER2P43116 358 aa14.81□□□□□ -0.04
CHMP3-204ENST00000409727 CCDC93Q567U6 631 aa14.81□□□□□ -0.04
CHMP3-204ENST00000409727 SGIP1Q9BQI5 828 aa14.81□□□□□ -0.04
CHMP3-204ENST00000409727 RTFDC1Q9BY42 306 aaPredicted RBP14.81□□□□□ -0.04
CHMP3-204ENST00000409727 CHD4Q14839 1912 aa14.81□□□□□ -0.04
CHMP3-204ENST00000409727 CCDC88AQ3V6T2 1871 aa14.81□□□□□ -0.04
CHMP3-204ENST00000409727 MAST2Q6P0Q8 1798 aa14.8□□□□□ -0.04
CHMP3-204ENST00000409727 ECE2O60344 883 aa14.8□□□□□ -0.04
CHMP3-204ENST00000409727 GNAT2P19087 354 aa14.8□□□□□ -0.04
CHMP3-204ENST00000409727 RPS6KB1P23443 525 aa14.8□□□□□ -0.04
CHMP3-204ENST00000409727 CC2D2BQ6DHV5 1058 aa14.8□□□□□ -0.04
CHMP3-204ENST00000409727 STK11IPQ8N1F8 1099 aa14.8□□□□□ -0.04
CHMP3-204ENST00000409727 TMX3Q96JJ7 454 aa14.8□□□□□ -0.04
CHMP3-204ENST00000409727 NACAP1Q9BZK3 213 aa14.8□□□□□ -0.04
CHMP3-204ENST00000409727 PPIP5K2O43314 1243 aa14.8□□□□□ -0.04
CHMP3-204ENST00000409727 MCM2P49736 904 aa14.8□□□□□ -0.04
CHMP3-204ENST00000409727 GSTO1P78417 241 aa14.8□□□□□ -0.04
CHMP3-204ENST00000409727 TBC1D22AQ8WUA7 517 aa14.8□□□□□ -0.04
CHMP3-204ENST00000409727 FAM205AQ6ZU69 1335 aa14.79□□□□□ -0.04
CHMP3-204ENST00000409727 SNED1Q8TER0 1413 aa14.79□□□□□ -0.04
CHMP3-204ENST00000409727 DALRD3Q5D0E6 543 aaKnown RBP14.79□□□□□ -0.04
CHMP3-204ENST00000409727 ILDR2Q71H61 639 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms