RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 BRI3BPQ8WY22 251 aa16.03■□□□□ 0.16
CHRNA1-205ENST00000409542 VAMP4O75379 141 aa16.03■□□□□ 0.16
CHRNA1-205ENST00000409542 OTUD7BQ6GQQ9 843 aa16.03■□□□□ 0.16
CHRNA1-205ENST00000409542 FAM205AQ6ZU69 1335 aa16.02■□□□□ 0.16
CHRNA1-205ENST00000409542 GYG1P46976 350 aa16.02■□□□□ 0.15
CHRNA1-205ENST00000409542 GRIK5Q16478 980 aa16.02■□□□□ 0.15
CHRNA1-205ENST00000409542 LDHAL6AQ6ZMR3 332 aa16.02■□□□□ 0.15
CHRNA1-205ENST00000409542 TDRD7Q8NHU6 1098 aaKnown RBP16.02■□□□□ 0.15
CHRNA1-205ENST00000409542 FANCIQ9NVI1 1328 aa16.01■□□□□ 0.15
CHRNA1-205ENST00000409542 TCP10L2B9ZVM9 353 aa16.01■□□□□ 0.15
CHRNA1-205ENST00000409542 RRP1P56182 461 aaKnown RBP16.01■□□□□ 0.15
CHRNA1-205ENST00000409542 B4GALNT3Q6L9W6 998 aa16.01■□□□□ 0.15
CHRNA1-205ENST00000409542 FAM43AQ8N2R8 423 aa16.01■□□□□ 0.15
CHRNA1-205ENST00000409542 ZNF333Q96JL9 665 aa16.01■□□□□ 0.15
CHRNA1-205ENST00000409542 PUS3Q9BZE2 481 aaKnown RBP16.01■□□□□ 0.15
CHRNA1-205ENST00000409542 TMEM39BQ9GZU3 492 aa16.01■□□□□ 0.15
CHRNA1-205ENST00000409542 TTF2Q9UNY4 1162 aaKnown RBP16.01■□□□□ 0.15
CHRNA1-205ENST00000409542 PTCH2Q9Y6C5 1203 aa16.01■□□□□ 0.15
CHRNA1-205ENST00000409542 ZSWIM8A7E2V4 1837 aa16■□□□□ 0.15
CHRNA1-205ENST00000409542 FXR1P51114 621 aaKnown RBP eCLIP16■□□□□ 0.15
CHRNA1-205ENST00000409542 VGLL4Q14135 290 aa16■□□□□ 0.15
CHRNA1-205ENST00000409542 MFSD14BQ5SR56 506 aa16■□□□□ 0.15
CHRNA1-205ENST00000409542 DZIP1LQ8IYY4 767 aaKnown RBP16■□□□□ 0.15
CHRNA1-205ENST00000409542 FAM84BQ96KN1 310 aaPredicted RBP16■□□□□ 0.15
CHRNA1-205ENST00000409542 RCAN3Q9UKA8 241 aa16■□□□□ 0.15
CHRNA1-205ENST00000409542 CACNA1FO60840 1977 aa16■□□□□ 0.15
CHRNA1-205ENST00000409542 IL16Q14005 1332 aa16■□□□□ 0.15
CHRNA1-205ENST00000409542 EXOSC9Q06265 439 aaKnown RBP15.99■□□□□ 0.15
CHRNA1-205ENST00000409542 TAF1CQ15572 869 aaPredicted RBP15.99■□□□□ 0.15
CHRNA1-205ENST00000409542 ARHGAP39Q9C0H5 1083 aa15.99■□□□□ 0.15
CHRNA1-205ENST00000409542 CNNM1Q9NRU3 951 aa15.99■□□□□ 0.15
CHRNA1-205ENST00000409542 SERPINA10Q9UK55 444 aa15.99■□□□□ 0.15
CHRNA1-205ENST00000409542 CCL15-CCL14A0A0B4J2E2 113 aa15.98■□□□□ 0.15
CHRNA1-205ENST00000409542 MYCP01106 439 aaPredicted RBP15.98■□□□□ 0.15
CHRNA1-205ENST00000409542 HIBADHP31937 336 aaKnown RBP15.98■□□□□ 0.15
CHRNA1-205ENST00000409542 CRKP46108 304 aa15.98■□□□□ 0.15
CHRNA1-205ENST00000409542 MAP3K9P80192 1104 aa15.98■□□□□ 0.15
CHRNA1-205ENST00000409542 CCL15Q16663 113 aa15.98■□□□□ 0.15
CHRNA1-205ENST00000409542 CCDC57Q2TAC2 916 aa15.98■□□□□ 0.15
CHRNA1-205ENST00000409542 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.98■□□□□ 0.15
CHRNA1-205ENST00000409542 SALL2Q9Y467 1007 aaPredicted RBP15.98■□□□□ 0.15
CHRNA1-205ENST00000409542 CACNB3P54284 484 aa15.97■□□□□ 0.15
CHRNA1-205ENST00000409542 TNFAIP1Q13829 316 aa15.97■□□□□ 0.15
CHRNA1-205ENST00000409542 UBE4AQ14139 1066 aa15.97■□□□□ 0.15
CHRNA1-205ENST00000409542 TAF7LQ5H9L4 462 aa15.97■□□□□ 0.15
CHRNA1-205ENST00000409542 OTUD5Q96G74 571 aa15.97■□□□□ 0.15
CHRNA1-205ENST00000409542 TMEM106CQ9BVX2 250 aa15.97■□□□□ 0.15
CHRNA1-205ENST00000409542 SPINK5Q9NQ38 1064 aaPredicted RBP15.97■□□□□ 0.15
CHRNA1-205ENST00000409542 IQSEC3Q9UPP2 1182 aaPredicted RBP15.97■□□□□ 0.15
CHRNA1-205ENST00000409542 COLQQ9Y215 455 aaPredicted RBP15.97■□□□□ 0.15
CHRNA1-205ENST00000409542 ARAP2Q8WZ64 1704 aa15.97■□□□□ 0.15
CHRNA1-205ENST00000409542 GRM8O00222 908 aa15.97■□□□□ 0.15
CHRNA1-205ENST00000409542 GTF2A2P52657 109 aa15.97■□□□□ 0.15
CHRNA1-205ENST00000409542 KAZALD1Q96I82 304 aa15.97■□□□□ 0.15
CHRNA1-205ENST00000409542 SUCLG2Q96I99 432 aa15.97■□□□□ 0.15
CHRNA1-205ENST00000409542 ZFYVE28Q9HCC9 887 aa15.97■□□□□ 0.15
CHRNA1-205ENST00000409542 SLC9C1Q4G0N8 1177 aa15.96■□□□□ 0.14
CHRNA1-205ENST00000409542 SH3TC2Q8TF17 1288 aa15.96■□□□□ 0.14
CHRNA1-205ENST00000409542 SNCAIPQ9Y6H5 919 aa15.96■□□□□ 0.14
CHRNA1-205ENST00000409542 ECM2O94769 699 aaPredicted RBP15.95■□□□□ 0.14
CHRNA1-205ENST00000409542 SLC4A8Q2Y0W8 1093 aa15.95■□□□□ 0.14
CHRNA1-205ENST00000409542 RIPOR2Q9Y4F9 1068 aa15.95■□□□□ 0.14
CHRNA1-205ENST00000409542 SPDYE5A6NIY4 337 aa15.94■□□□□ 0.14
CHRNA1-205ENST00000409542 BTBD19C9JJ37 291 aa15.94■□□□□ 0.14
CHRNA1-205ENST00000409542 CTGFP29279 349 aa15.94■□□□□ 0.14
CHRNA1-205ENST00000409542 CHAF1AQ13111 956 aaPredicted RBP15.94■□□□□ 0.14
CHRNA1-205ENST00000409542 FBXO33Q7Z6M2 555 aa15.94■□□□□ 0.14
CHRNA1-205ENST00000409542 ZKSCAN4Q969J2 545 aaPredicted RBP15.94■□□□□ 0.14
CHRNA1-205ENST00000409542 CCDC136Q96JN2 1154 aa15.94■□□□□ 0.14
CHRNA1-205ENST00000409542 ZNF521Q96K83 1311 aa15.94■□□□□ 0.14
CHRNA1-205ENST00000409542 LRRC24Q50LG9 513 aa15.93■□□□□ 0.14
CHRNA1-205ENST00000409542 NBPF11Q86T75 865 aa15.93■□□□□ 0.14
CHRNA1-205ENST00000409542 CDCA7LQ96GN5 454 aa15.93■□□□□ 0.14
CHRNA1-205ENST00000409542 C9orf78Q9NZ63 289 aaPredicted RBP15.93■□□□□ 0.14
CHRNA1-205ENST00000409542 CSADQ9Y600 493 aa15.93■□□□□ 0.14
CHRNA1-205ENST00000409542 SZT2Q5T011 3432 aa15.93■□□□□ 0.14
CHRNA1-205ENST00000409542 IRF6O14896 467 aa15.92■□□□□ 0.14
CHRNA1-205ENST00000409542 TLR2O60603 784 aa15.92■□□□□ 0.14
CHRNA1-205ENST00000409542 NBPF7P0C2Y1 421 aaPredicted RBP15.92■□□□□ 0.14
CHRNA1-205ENST00000409542 TNNI2P48788 182 aa15.92■□□□□ 0.14
CHRNA1-205ENST00000409542 LACTBP83111 547 aaPredicted RBP15.92■□□□□ 0.14
CHRNA1-205ENST00000409542 SLC4A10Q6U841 1118 aa15.92■□□□□ 0.14
CHRNA1-205ENST00000409542 H0YGN5 161 aa15.91■□□□□ 0.14
CHRNA1-205ENST00000409542 ALDH1L1O75891 902 aa15.91■□□□□ 0.14
CHRNA1-205ENST00000409542 NCBP3Q53F19 620 aaKnown RBP15.91■□□□□ 0.14
CHRNA1-205ENST00000409542 WDR63Q8IWG1 891 aa15.91■□□□□ 0.14
CHRNA1-205ENST00000409542 WRNIP1Q96S55 665 aa15.91■□□□□ 0.14
CHRNA1-205ENST00000409542 CETPP11597 493 aa15.91■□□□□ 0.14
CHRNA1-205ENST00000409542 ARHGEF6Q15052 776 aa15.91■□□□□ 0.14
CHRNA1-205ENST00000409542 MTFR1Q15390 333 aa15.91■□□□□ 0.14
CHRNA1-205ENST00000409542 APOBEC3HQ6NTF7 200 aaKnown RBP15.91■□□□□ 0.14
CHRNA1-205ENST00000409542 ERO1BQ86YB8 467 aa15.91■□□□□ 0.14
CHRNA1-205ENST00000409542 CEP290O15078 2479 aa15.9■□□□□ 0.14
CHRNA1-205ENST00000409542 BCAMP50895 628 aa15.9■□□□□ 0.14
CHRNA1-205ENST00000409542 HDLBPQ00341 1268 aaKnown RBP15.9■□□□□ 0.14
CHRNA1-205ENST00000409542 MIGA2Q7L4E1 593 aa15.9■□□□□ 0.14
CHRNA1-205ENST00000409542 VGLL2Q8N8G2 317 aa15.9■□□□□ 0.14
CHRNA1-205ENST00000409542 SHISA4Q96DD7 197 aa15.9■□□□□ 0.14
CHRNA1-205ENST00000409542 SRCIN1Q9C0H9 1055 aa15.9■□□□□ 0.14
CHRNA1-205ENST00000409542 BICC1Q9H694 974 aaKnown RBP15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms