RNA–Protein interactions for RNA: ENST00000409469.5

CUL1-202, Transcript of cullin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUL1, Length 2,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL1-202ENST00000409469 KDM4AO75164 1064 aa11.76□□□□□ -0.53
CUL1-202ENST00000409469 MBD4O95243 580 aa11.76□□□□□ -0.53
CUL1-202ENST00000409469 ZFYP08048 801 aaPredicted RBP11.76□□□□□ -0.53
CUL1-202ENST00000409469 ANKRD1Q15327 319 aa11.76□□□□□ -0.53
CUL1-202ENST00000409469 ADGRA1Q86SQ6 560 aa11.76□□□□□ -0.53
CUL1-202ENST00000409469 TBC1D10CQ8IV04 446 aa11.76□□□□□ -0.53
CUL1-202ENST00000409469 CDC5LQ99459 802 aaKnown RBP11.76□□□□□ -0.53
CUL1-202ENST00000409469 TRPC5Q9UL62 973 aaPredicted RBP11.76□□□□□ -0.53
CUL1-202ENST00000409469 SYCE3A1L190 88 aa11.75□□□□□ -0.53
CUL1-202ENST00000409469 RXRAP19793 462 aa11.75□□□□□ -0.53
CUL1-202ENST00000409469 IMMTQ16891 758 aaKnown RBP11.75□□□□□ -0.53
CUL1-202ENST00000409469 AIDAQ96BJ3 306 aa11.75□□□□□ -0.53
CUL1-202ENST00000409469 GPR101Q96P66 508 aaPredicted RBP11.75□□□□□ -0.53
CUL1-202ENST00000409469 GRPEL1Q9HAV7 217 aa11.75□□□□□ -0.53
CUL1-202ENST00000409469 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.75□□□□□ -0.53
CUL1-202ENST00000409469 CHRM1P11229 460 aaPredicted RBP11.75□□□□□ -0.53
CUL1-202ENST00000409469 EXOSC10Q01780 885 aaKnown RBP11.75□□□□□ -0.53
CUL1-202ENST00000409469 GUCY1B3Q02153 619 aa11.75□□□□□ -0.53
CUL1-202ENST00000409469 PLCD4Q9BRC7 762 aa11.75□□□□□ -0.53
CUL1-202ENST00000409469 ZNF213O14771 459 aa11.74□□□□□ -0.53
CUL1-202ENST00000409469 UQCRFS1P1P0C7P4 283 aa11.74□□□□□ -0.53
CUL1-202ENST00000409469 TXNRD3Q86VQ6 643 aa11.74□□□□□ -0.53
CUL1-202ENST00000409469 LCORLQ8N3X6 602 aa11.74□□□□□ -0.53
CUL1-202ENST00000409469 SENP2Q9HC62 589 aa11.74□□□□□ -0.53
CUL1-202ENST00000409469 EPB41L4AQ9HCS5 686 aaPredicted RBP11.74□□□□□ -0.53
CUL1-202ENST00000409469 LRP2BPQ9P2M1 347 aa11.74□□□□□ -0.53
CUL1-202ENST00000409469 COL1A1P02452 1464 aaPredicted RBP11.74□□□□□ -0.53
CUL1-202ENST00000409469 NHSQ6T4R5 1651 aa11.74□□□□□ -0.53
CUL1-202ENST00000409469 CICQ96RK0 1608 aaPredicted RBP11.74□□□□□ -0.53
CUL1-202ENST00000409469 CTDNEP1O95476 244 aa11.74□□□□□ -0.53
CUL1-202ENST00000409469 ANTXR2P58335 489 aa11.74□□□□□ -0.53
CUL1-202ENST00000409469 CTDSPL2Q05D32 466 aa11.74□□□□□ -0.53
CUL1-202ENST00000409469 NFIXQ14938 502 aa11.74□□□□□ -0.53
CUL1-202ENST00000409469 TTF1Q15361 905 aaPredicted RBP11.74□□□□□ -0.53
CUL1-202ENST00000409469 TRAPPC3LQ5T215 181 aa11.74□□□□□ -0.53
CUL1-202ENST00000409469 NLRP3Q96P20 1036 aa11.74□□□□□ -0.53
CUL1-202ENST00000409469 TFIP11Q9UBB9 837 aaKnown RBP11.74□□□□□ -0.53
CUL1-202ENST00000409469 MYH7P12883 1935 aa11.74□□□□□ -0.53
CUL1-202ENST00000409469 PRC1O43663 620 aa11.73□□□□□ -0.53
CUL1-202ENST00000409469 SF3B3Q15393 1217 aaKnown RBP11.73□□□□□ -0.53
CUL1-202ENST00000409469 LRRFIP1Q32MZ4 808 aaKnown RBP11.73□□□□□ -0.53
CUL1-202ENST00000409469 ZNF512BQ96KM6 892 aaPredicted RBP11.73□□□□□ -0.53
CUL1-202ENST00000409469 TACC3Q9Y6A5 838 aa11.73□□□□□ -0.53
CUL1-202ENST00000409469 CASZ1Q86V15 1759 aa11.73□□□□□ -0.53
CUL1-202ENST00000409469 SCN7AQ01118 1682 aa11.73□□□□□ -0.53
CUL1-202ENST00000409469 VPS37DQ86XT2 251 aa11.73□□□□□ -0.53
CUL1-202ENST00000409469 SDR42E1Q8WUS8 393 aa11.73□□□□□ -0.53
CUL1-202ENST00000409469 STRBPQ96SI9 672 aaKnown RBP11.73□□□□□ -0.53
CUL1-202ENST00000409469 GJB4Q9NTQ9 266 aa11.73□□□□□ -0.53
CUL1-202ENST00000409469 NEDD4P46934 1319 aa11.73□□□□□ -0.53
CUL1-202ENST00000409469 B4E1Z4 1266 aa11.73□□□□□ -0.53
CUL1-202ENST00000409469 MAP3K12Q12852 859 aa11.73□□□□□ -0.53
CUL1-202ENST00000409469 UBE3CQ15386 1083 aa11.73□□□□□ -0.53
CUL1-202ENST00000409469 RC3H1Q5TC82 1133 aaKnown RBP11.73□□□□□ -0.53
CUL1-202ENST00000409469 CCDC144CPQ8IYA2 1237 aa11.73□□□□□ -0.53
CUL1-202ENST00000409469 BSDC1Q9NW68 430 aaPredicted RBP11.73□□□□□ -0.53
CUL1-202ENST00000409469 ATRNO75882 1429 aa11.72□□□□□ -0.53
CUL1-202ENST00000409469 PDIA3P30101 505 aaKnown RBP11.72□□□□□ -0.53
CUL1-202ENST00000409469 RPS8P62241 208 aaKnown RBP11.72□□□□□ -0.53
CUL1-202ENST00000409469 SLC4A8Q2Y0W8 1093 aa11.72□□□□□ -0.53
CUL1-202ENST00000409469 OTUD7BQ6GQQ9 843 aa11.72□□□□□ -0.53
CUL1-202ENST00000409469 TPTE2Q6XPS3 522 aa11.72□□□□□ -0.53
CUL1-202ENST00000409469 CYB5R4Q7L1T6 521 aa11.72□□□□□ -0.53
CUL1-202ENST00000409469 FAM84BQ96KN1 310 aaPredicted RBP11.72□□□□□ -0.53
CUL1-202ENST00000409469 RAI14Q9P0K7 980 aa11.72□□□□□ -0.53
CUL1-202ENST00000409469 SBF2Q86WG5 1849 aa11.72□□□□□ -0.53
CUL1-202ENST00000409469 PTPDC1A2A3K4 754 aa11.72□□□□□ -0.53
CUL1-202ENST00000409469 PTMSP20962 102 aa11.72□□□□□ -0.53
CUL1-202ENST00000409469 CEBPZQ03701 1054 aaKnown RBP11.72□□□□□ -0.53
CUL1-202ENST00000409469 EVX2Q03828 476 aa11.72□□□□□ -0.53
CUL1-202ENST00000409469 CHAF1AQ13111 956 aaPredicted RBP11.72□□□□□ -0.53
CUL1-202ENST00000409469 L1TD1Q5T7N2 865 aaKnown RBP11.72□□□□□ -0.53
CUL1-202ENST00000409469 ZSCAN25Q6NSZ9 544 aa11.72□□□□□ -0.53
CUL1-202ENST00000409469 RALYLQ86SE5 291 aaKnown RBP11.72□□□□□ -0.53
CUL1-202ENST00000409469 MB21D2Q8IYB1 491 aaPredicted RBP11.72□□□□□ -0.53
CUL1-202ENST00000409469 NSUN7Q8NE18 718 aaKnown RBP11.72□□□□□ -0.53
CUL1-202ENST00000409469 MYL10Q9BUA6 226 aa11.72□□□□□ -0.53
CUL1-202ENST00000409469 FTOQ9C0B1 505 aaKnown RBP eCLIP11.72□□□□□ -0.532e-6■■□□□ 11.6
CUL1-202ENST00000409469 ALDH8A1Q9H2A2 487 aaPredicted RBP11.72□□□□□ -0.53
CUL1-202ENST00000409469 RTL9Q8NET4 1388 aa11.72□□□□□ -0.53
CUL1-202ENST00000409469 C4BP0C0L5 1744 aa11.72□□□□□ -0.53
CUL1-202ENST00000409469 LAMB2P55268 1798 aa11.71□□□□□ -0.53
CUL1-202ENST00000409469 KLF18A0A0U1RQI7 1052 aa11.71□□□□□ -0.53
CUL1-202ENST00000409469 RRP12Q5JTH9 1297 aaKnown RBP11.71□□□□□ -0.53
CUL1-202ENST00000409469 ZKSCAN3Q9BRR0 538 aa11.71□□□□□ -0.53
CUL1-202ENST00000409469 CTNNA3Q9UI47 895 aa11.71□□□□□ -0.53
CUL1-202ENST00000409469 TNRC6CQ9HCJ0 1690 aaKnown RBP11.71□□□□□ -0.53
CUL1-202ENST00000409469 TAF1LQ8IZX4 1826 aa11.71□□□□□ -0.54
CUL1-202ENST00000409469 ONECUT3O60422 494 aaPredicted RBP11.71□□□□□ -0.54
CUL1-202ENST00000409469 TM4SF1P30408 202 aa11.71□□□□□ -0.54
CUL1-202ENST00000409469 IFNL3Q8IZI9 196 aa11.71□□□□□ -0.54
CUL1-202ENST00000409469 RNF214Q8ND24 703 aa11.71□□□□□ -0.54
CUL1-202ENST00000409469 ZNF384Q8TF68 577 aa11.71□□□□□ -0.54
CUL1-202ENST00000409469 TOMM22Q9NS69 142 aa11.71□□□□□ -0.54
CUL1-202ENST00000409469 ARAP2Q8WZ64 1704 aa11.71□□□□□ -0.54
CUL1-202ENST00000409469 PFKFB2O60825 505 aa11.7□□□□□ -0.54
CUL1-202ENST00000409469 CYP7A1P22680 504 aa11.7□□□□□ -0.54
CUL1-202ENST00000409469 DYNLL1P63167 89 aaKnown RBP11.7□□□□□ -0.54
CUL1-202ENST00000409469 KCTD17Q8N5Z5 321 aa11.7□□□□□ -0.54
CUL1-202ENST00000409469 FAM184AQ8NB25 1140 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms