RNA–Protein interactions for RNA: ENST00000407449.5

PIKFYVE-204, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 1 (best) BASIC

Gene PIKFYVE, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-204ENST00000407449 CCNL1Q9UK58 526 aaPredicted RBP19.5■□□□□ 0.71
PIKFYVE-204ENST00000407449 C4AP0C0L4 1744 aa19.5■□□□□ 0.71
PIKFYVE-204ENST00000407449 C4BP0C0L5 1744 aa19.5■□□□□ 0.71
PIKFYVE-204ENST00000407449 KLF18A0A0U1RQI7 1052 aa19.5■□□□□ 0.71
PIKFYVE-204ENST00000407449 PATL2C9JE40 543 aaKnown RBP19.5■□□□□ 0.71
PIKFYVE-204ENST00000407449 MBD4O95243 580 aa19.5■□□□□ 0.71
PIKFYVE-204ENST00000407449 GTF2E1P29083 439 aaPredicted RBP19.5■□□□□ 0.71
PIKFYVE-204ENST00000407449 UBE4AQ14139 1066 aa19.5■□□□□ 0.71
PIKFYVE-204ENST00000407449 BICDL1Q6ZP65 573 aa19.5■□□□□ 0.71
PIKFYVE-204ENST00000407449 PNPLA7Q6ZV29 1317 aa19.49■□□□□ 0.71
PIKFYVE-204ENST00000407449 CARMIL3Q8ND23 1372 aa19.49■□□□□ 0.71
PIKFYVE-204ENST00000407449 GOLGA8BA8MQT2 603 aa19.49■□□□□ 0.71
PIKFYVE-204ENST00000407449 GNPATO15228 680 aa19.49■□□□□ 0.71
PIKFYVE-204ENST00000407449 DHX16O60231 1041 aaKnown RBP19.49■□□□□ 0.71
PIKFYVE-204ENST00000407449 LEO1Q8WVC0 666 aaPredicted RBP19.49■□□□□ 0.71
PIKFYVE-204ENST00000407449 ZPR1O75312 459 aa19.48■□□□□ 0.71
PIKFYVE-204ENST00000407449 GNAT2P19087 354 aa19.48■□□□□ 0.71
PIKFYVE-204ENST00000407449 SETDB2Q96T68 719 aa19.48■□□□□ 0.71
PIKFYVE-204ENST00000407449 GNL3LQ9NVN8 582 aaKnown RBP19.48■□□□□ 0.71
PIKFYVE-204ENST00000407449 SRP68Q9UHB9 627 aaKnown RBP19.48■□□□□ 0.71
PIKFYVE-204ENST00000407449 TPRNQ4KMQ1 711 aa19.48■□□□□ 0.71
PIKFYVE-204ENST00000407449 IFNL3Q8IZI9 196 aa19.48■□□□□ 0.71
PIKFYVE-204ENST00000407449 EPB41L4AQ9HCS5 686 aaPredicted RBP19.48■□□□□ 0.71
PIKFYVE-204ENST00000407449 RRAGDQ9NQL2 400 aaPredicted RBP19.48■□□□□ 0.71
PIKFYVE-204ENST00000407449 TFIP11Q9UBB9 837 aaKnown RBP19.48■□□□□ 0.71
PIKFYVE-204ENST00000407449 HPS5Q9UPZ3 1129 aa19.48■□□□□ 0.71
PIKFYVE-204ENST00000407449 RTCBQ9Y3I0 505 aaKnown RBP19.48■□□□□ 0.71
PIKFYVE-204ENST00000407449 PDLIM2Q96JY6 352 aa19.47■□□□□ 0.71
PIKFYVE-204ENST00000407449 NAPBQ9H115 298 aa19.47■□□□□ 0.71
PIKFYVE-204ENST00000407449 ARMT1Q9H993 441 aa19.47■□□□□ 0.71
PIKFYVE-204ENST00000407449 CFAP45Q9UL16 551 aa19.47■□□□□ 0.71
PIKFYVE-204ENST00000407449 SMIM5Q71RC9 77 aa19.46■□□□□ 0.71
PIKFYVE-204ENST00000407449 NBPF5PQ86XG9 351 aaPredicted RBP19.46■□□□□ 0.71
PIKFYVE-204ENST00000407449 GJD4Q96KN9 370 aaPredicted RBP19.46■□□□□ 0.71
PIKFYVE-204ENST00000407449 LRP2BPQ9P2M1 347 aa19.46■□□□□ 0.71
PIKFYVE-204ENST00000407449 ANGEL1Q9UNK9 670 aaKnown RBP19.46■□□□□ 0.71
PIKFYVE-204ENST00000407449 MINPP1Q9UNW1 487 aa19.46■□□□□ 0.71
PIKFYVE-204ENST00000407449 GOLGA6L4A6NEF3 574 aa19.45■□□□□ 0.7
PIKFYVE-204ENST00000407449 SH2B2O14492 632 aaPredicted RBP19.45■□□□□ 0.7
PIKFYVE-204ENST00000407449 ATL3Q6DD88 541 aa19.45■□□□□ 0.7
PIKFYVE-204ENST00000407449 CYB5R4Q7L1T6 521 aa19.45■□□□□ 0.7
PIKFYVE-204ENST00000407449 RNF214Q8ND24 703 aa19.45■□□□□ 0.7
PIKFYVE-204ENST00000407449 TMEM87BQ96K49 555 aa19.45■□□□□ 0.7
PIKFYVE-204ENST00000407449 NLRP3Q96P20 1036 aa19.45■□□□□ 0.7
PIKFYVE-204ENST00000407449 COL1A1P02452 1464 aaPredicted RBP19.45■□□□□ 0.7
PIKFYVE-204ENST00000407449 GSG1L2A8MUP6 293 aa19.45■□□□□ 0.7
PIKFYVE-204ENST00000407449 FDPSP14324 419 aaKnown RBP19.45■□□□□ 0.7
PIKFYVE-204ENST00000407449 MEX3CQ5U5Q3 659 aaKnown RBP19.45■□□□□ 0.7
PIKFYVE-204ENST00000407449 CELF1Q92879 486 aaKnown RBP19.45■□□□□ 0.7
PIKFYVE-204ENST00000407449 NACAP1Q9BZK3 213 aa19.45■□□□□ 0.7
PIKFYVE-204ENST00000407449 MYH13Q9UKX3 1938 aa19.45■□□□□ 0.7
PIKFYVE-204ENST00000407449 NEDD4P46934 1319 aa19.45■□□□□ 0.7
PIKFYVE-204ENST00000407449 GYG1P46976 350 aa19.44■□□□□ 0.7
PIKFYVE-204ENST00000407449 FOSBP53539 338 aa19.44■□□□□ 0.7
PIKFYVE-204ENST00000407449 CAVIN4Q5BKX8 364 aa19.44■□□□□ 0.7
PIKFYVE-204ENST00000407449 LCORLQ8N3X6 602 aa19.44■□□□□ 0.7
PIKFYVE-204ENST00000407449 CACNA1SQ13698 1873 aa19.43■□□□□ 0.7
PIKFYVE-204ENST00000407449 UVSSAQ2YD98 709 aa19.43■□□□□ 0.7
PIKFYVE-204ENST00000407449 FAM182BQ5T319 152 aa19.43■□□□□ 0.7
PIKFYVE-204ENST00000407449 TPTE2Q6XPS3 522 aa19.43■□□□□ 0.7
PIKFYVE-204ENST00000407449 FUCA2Q9BTY2 467 aa19.43■□□□□ 0.7
PIKFYVE-204ENST00000407449 CNNM2Q9H8M5 875 aa19.43■□□□□ 0.7
PIKFYVE-204ENST00000407449 DENND2AQ9ULE3 1009 aa19.43■□□□□ 0.7
PIKFYVE-204ENST00000407449 ESPNB1AK53 854 aa19.43■□□□□ 0.7
PIKFYVE-204ENST00000407449 B4E1Z4 1266 aa19.43■□□□□ 0.7
PIKFYVE-204ENST00000407449 CPLX1O14810 134 aa19.43■□□□□ 0.7
PIKFYVE-204ENST00000407449 LIG1P18858 919 aa19.43■□□□□ 0.7
PIKFYVE-204ENST00000407449 ADD1P35611 737 aaKnown RBP19.43■□□□□ 0.7
PIKFYVE-204ENST00000407449 RGS22Q8NE09 1264 aa19.43■□□□□ 0.7
PIKFYVE-204ENST00000407449 ARHGEF1Q92888 912 aaKnown RBP19.43■□□□□ 0.7
PIKFYVE-204ENST00000407449 ZNF396Q96N95 335 aaPredicted RBP19.43■□□□□ 0.7
PIKFYVE-204ENST00000407449 SLC4A4Q9Y6R1 1079 aa19.43■□□□□ 0.7
PIKFYVE-204ENST00000407449 TNRC6CQ9HCJ0 1690 aaKnown RBP19.43■□□□□ 0.7
PIKFYVE-204ENST00000407449 SEMA3EO15041 775 aa19.42■□□□□ 0.7
PIKFYVE-204ENST00000407449 TDO2P48775 406 aa19.42■□□□□ 0.7
PIKFYVE-204ENST00000407449 RPS8P62241 208 aaKnown RBP19.42■□□□□ 0.7
PIKFYVE-204ENST00000407449 NUP62CLQ9H1M0 184 aa19.42■□□□□ 0.7
PIKFYVE-204ENST00000407449 DDX19AQ9NUU7 478 aaKnown RBP19.42■□□□□ 0.7
PIKFYVE-204ENST00000407449 IQSEC3Q9UPP2 1182 aaPredicted RBP19.42■□□□□ 0.7
PIKFYVE-204ENST00000407449 AFF2P51816 1311 aa19.41■□□□□ 0.7
PIKFYVE-204ENST00000407449 CYP7A1P22680 504 aa19.41■□□□□ 0.7
PIKFYVE-204ENST00000407449 HS1BP3Q53T59 392 aa19.41■□□□□ 0.7
PIKFYVE-204ENST00000407449 AKNAD1Q5T1N1 836 aa19.41■□□□□ 0.7
PIKFYVE-204ENST00000407449 GIMAP6Q6P9H5 292 aa19.41■□□□□ 0.7
PIKFYVE-204ENST00000407449 STAG1Q8WVM7 1258 aa19.41■□□□□ 0.7
PIKFYVE-204ENST00000407449 KRT23Q9C075 422 aa19.41■□□□□ 0.7
PIKFYVE-204ENST00000407449 ANKRD2Q9GZV1 360 aa19.41■□□□□ 0.7
PIKFYVE-204ENST00000407449 ORC3Q9UBD5 711 aaPredicted RBP19.41■□□□□ 0.7
PIKFYVE-204ENST00000407449 MAST2Q6P0Q8 1798 aa19.41■□□□□ 0.7
PIKFYVE-204ENST00000407449 PDS5AQ29RF7 1337 aaKnown RBP19.41■□□□□ 0.7
PIKFYVE-204ENST00000407449 PRKAB2O43741 272 aa19.41■□□□□ 0.7
PIKFYVE-204ENST00000407449 ONECUT3O60422 494 aaPredicted RBP19.41■□□□□ 0.7
PIKFYVE-204ENST00000407449 CTDSPL2Q05D32 466 aa19.41■□□□□ 0.7
PIKFYVE-204ENST00000407449 VPS37DQ86XT2 251 aa19.41■□□□□ 0.7
PIKFYVE-204ENST00000407449 NKX2-3Q8TAU0 364 aa19.41■□□□□ 0.7
PIKFYVE-204ENST00000407449 PGBD1Q96JS3 809 aa19.41■□□□□ 0.7
PIKFYVE-204ENST00000407449 C8orf76Q96K31 380 aa19.41■□□□□ 0.7
PIKFYVE-204ENST00000407449 FAM84BQ96KN1 310 aaPredicted RBP19.41■□□□□ 0.7
PIKFYVE-204ENST00000407449 RAI14Q9P0K7 980 aa19.41■□□□□ 0.7
PIKFYVE-204ENST00000407449 RCOR1Q9UKL0 485 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms