RNA–Protein interactions for RNA: ENST00000406638.6

LSP1-204, Transcript of lymphocyte specific protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LSP1, Length 2,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1-204ENST00000406638 RUFY2Q8WXA3 655 aa18.87■□□□□ 0.61
LSP1-204ENST00000406638 PPP1R13BQ96KQ4 1090 aa18.87■□□□□ 0.61
LSP1-204ENST00000406638 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.87■□□□□ 0.61
LSP1-204ENST00000406638 TNNI3KQ59H18 835 aa18.87■□□□□ 0.61
LSP1-204ENST00000406638 CREB3L3Q68CJ9 461 aa18.87■□□□□ 0.61
LSP1-204ENST00000406638 TMCO3Q6UWJ1 677 aa18.87■□□□□ 0.61
LSP1-204ENST00000406638 DHX40Q8IX18 779 aaKnown RBP18.87■□□□□ 0.61
LSP1-204ENST00000406638 ZBTB38Q8NAP3 1195 aaPredicted RBP18.87■□□□□ 0.61
LSP1-204ENST00000406638 FPGT-TNNI3KV9GXZ4 949 aa18.87■□□□□ 0.61
LSP1-204ENST00000406638 KIF2AO00139 706 aaPredicted RBP18.86■□□□□ 0.61
LSP1-204ENST00000406638 PCCAP05165 728 aaPredicted RBP18.86■□□□□ 0.61
LSP1-204ENST00000406638 STX1AQ16623 288 aa18.86■□□□□ 0.61
LSP1-204ENST00000406638 CCDC93Q567U6 631 aa18.86■□□□□ 0.61
LSP1-204ENST00000406638 SUSD4Q5VX71 490 aa18.86■□□□□ 0.61
LSP1-204ENST00000406638 TRIM28Q13263 835 aaKnown RBP18.86■□□□□ 0.61
LSP1-204ENST00000406638 SMARCE1Q969G3 411 aa18.86■□□□□ 0.61
LSP1-204ENST00000406638 GREM2Q9H772 168 aa18.86■□□□□ 0.61
LSP1-204ENST00000406638 TAF6LQ9Y6J9 622 aa18.86■□□□□ 0.61
LSP1-204ENST00000406638 JAK2O60674 1132 aa18.85■□□□□ 0.61
LSP1-204ENST00000406638 CAMTA2O94983 1202 aa18.85■□□□□ 0.61
LSP1-204ENST00000406638 AOPEPQ8N6M6 819 aa18.85■□□□□ 0.61
LSP1-204ENST00000406638 RSPH14Q9UHP6 348 aa18.85■□□□□ 0.61
LSP1-204ENST00000406638 USP42Q9H9J4 1324 aaKnown RBP18.85■□□□□ 0.61
LSP1-204ENST00000406638 COL15A1P39059 1388 aa18.85■□□□□ 0.61
LSP1-204ENST00000406638 GLRX3O76003 335 aaKnown RBP18.85■□□□□ 0.61
LSP1-204ENST00000406638 ZRANB2O95218 330 aaKnown RBP eCLIP18.85■□□□□ 0.61
LSP1-204ENST00000406638 UBXN4Q92575 508 aa18.85■□□□□ 0.61
LSP1-204ENST00000406638 QTRT2Q9H974 415 aaKnown RBP18.85■□□□□ 0.61
LSP1-204ENST00000406638 IRS4O14654 1257 aaPredicted RBP18.84■□□□□ 0.61
LSP1-204ENST00000406638 NBPF11Q86T75 865 aa18.84■□□□□ 0.61
LSP1-204ENST00000406638 HOMER1Q86YM7 354 aa18.84■□□□□ 0.61
LSP1-204ENST00000406638 TRIM66O15016 1216 aa18.84■□□□□ 0.61
LSP1-204ENST00000406638 ZNF34Q8IZ26 560 aa18.84■□□□□ 0.61
LSP1-204ENST00000406638 NEUROD6Q96NK8 337 aa18.84■□□□□ 0.61
LSP1-204ENST00000406638 FTOQ9C0B1 505 aaKnown RBP eCLIP18.84■□□□□ 0.61
LSP1-204ENST00000406638 EPC1Q9H2F5 836 aa18.84■□□□□ 0.61
LSP1-204ENST00000406638 TPM4P67936 248 aa18.83■□□□□ 0.61
LSP1-204ENST00000406638 C10orf67Q8IYJ2 551 aa18.83■□□□□ 0.61
LSP1-204ENST00000406638 KCNB2Q92953 911 aa18.83■□□□□ 0.61
LSP1-204ENST00000406638 FAM227BQ96M60 508 aa18.83■□□□□ 0.61
LSP1-204ENST00000406638 TMX1Q9H3N1 280 aa18.83■□□□□ 0.61
LSP1-204ENST00000406638 LCMT1Q9UIC8 334 aa18.83■□□□□ 0.61
LSP1-204ENST00000406638 TTC41PQ6P2S7 1318 aa18.83■□□□□ 0.61
LSP1-204ENST00000406638 TAF7LQ5H9L4 462 aa18.83■□□□□ 0.6
LSP1-204ENST00000406638 BICDL1Q6ZP65 573 aa18.83■□□□□ 0.6
LSP1-204ENST00000406638 CCAR1Q8IX12 1150 aaKnown RBP18.83■□□□□ 0.6
LSP1-204ENST00000406638 TTLL11Q8NHH1 800 aa18.83■□□□□ 0.6
LSP1-204ENST00000406638 ORC3Q9UBD5 711 aaPredicted RBP18.83■□□□□ 0.6
LSP1-204ENST00000406638 DNAI1Q9UI46 699 aa18.83■□□□□ 0.6
LSP1-204ENST00000406638 FOSBP53539 338 aa18.82■□□□□ 0.6
LSP1-204ENST00000406638 IRX3P78415 501 aaPredicted RBP18.82■□□□□ 0.6
LSP1-204ENST00000406638 BLOC1S2Q6QNY1 142 aa18.82■□□□□ 0.6
LSP1-204ENST00000406638 TXLNBQ8N3L3 684 aa18.82■□□□□ 0.6
LSP1-204ENST00000406638 SMARCC1Q92922 1105 aaPredicted RBP18.82■□□□□ 0.6
LSP1-204ENST00000406638 GOLPH3LQ9H4A5 285 aa18.82■□□□□ 0.6
LSP1-204ENST00000406638 KCND1Q9NSA2 647 aa18.82■□□□□ 0.6
LSP1-204ENST00000406638 ARGLU1Q9NWB6 273 aaPredicted RBP18.82■□□□□ 0.6
LSP1-204ENST00000406638 EYA2O00167 538 aa18.82■□□□□ 0.6
LSP1-204ENST00000406638 SLC27A2O14975 620 aa18.82■□□□□ 0.6
LSP1-204ENST00000406638 GSDMDP57764 484 aa18.82■□□□□ 0.6
LSP1-204ENST00000406638 CCDC57Q2TAC2 916 aa18.82■□□□□ 0.6
LSP1-204ENST00000406638 ARMCX5Q6P1M9 558 aa18.82■□□□□ 0.6
LSP1-204ENST00000406638 BRF1Q92994 677 aa18.82■□□□□ 0.6
LSP1-204ENST00000406638 SRP68Q9UHB9 627 aaKnown RBP18.82■□□□□ 0.6
LSP1-204ENST00000406638 GYS2P54840 703 aa18.81■□□□□ 0.6
LSP1-204ENST00000406638 TOB2Q14106 344 aaPredicted RBP18.81■□□□□ 0.6
LSP1-204ENST00000406638 RASSF4Q9H2L5 321 aa18.81■□□□□ 0.6
LSP1-204ENST00000406638 THSD7AQ9UPZ6 1657 aa18.81■□□□□ 0.6
LSP1-204ENST00000406638 NUP98P52948 1817 aa18.81■□□□□ 0.6
LSP1-204ENST00000406638 ERVV-1B6SEH8 477 aa18.81■□□□□ 0.6
LSP1-204ENST00000406638 H3BQV1 296 aa18.81■□□□□ 0.6
LSP1-204ENST00000406638 IFFO2Q5TF58 517 aa18.81■□□□□ 0.6
LSP1-204ENST00000406638 TMC6Q7Z403 805 aa18.81■□□□□ 0.6
LSP1-204ENST00000406638 CCDC24Q8N4L8 307 aa18.81■□□□□ 0.6
LSP1-204ENST00000406638 CCDC34Q96HJ3 373 aa18.81■□□□□ 0.6
LSP1-204ENST00000406638 TRPC5Q9UL62 973 aaPredicted RBP18.81■□□□□ 0.6
LSP1-204ENST00000406638 NIP7Q9Y221 180 aaKnown RBP eCLIP18.81■□□□□ 0.6
LSP1-204ENST00000406638 ITGA6P23229 1130 aa18.8■□□□□ 0.6
LSP1-204ENST00000406638 PSMA5P28066 241 aa18.8■□□□□ 0.6
LSP1-204ENST00000406638 RESTQ13127 1097 aa18.8■□□□□ 0.6
LSP1-204ENST00000406638 PAXIP1Q6ZW49 1069 aaPredicted RBP18.8■□□□□ 0.6
LSP1-204ENST00000406638 SNAP23O00161 211 aa18.8■□□□□ 0.6
LSP1-204ENST00000406638 SASH3O75995 380 aa18.8■□□□□ 0.6
LSP1-204ENST00000406638 SMC2O95347 1197 aa18.8■□□□□ 0.6
LSP1-204ENST00000406638 CSF1RP07333 972 aa18.8■□□□□ 0.6
LSP1-204ENST00000406638 OAS2P29728 719 aaKnown RBP18.8■□□□□ 0.6
LSP1-204ENST00000406638 ADORA1P30542 326 aa18.8■□□□□ 0.6
LSP1-204ENST00000406638 ZSCAN26Q16670 478 aa18.8■□□□□ 0.6
LSP1-204ENST00000406638 MNS1Q8NEH6 495 aa18.8■□□□□ 0.6
LSP1-204ENST00000406638 CTSWP56202 376 aa18.79■□□□□ 0.6
LSP1-204ENST00000406638 MAP4K1Q92918 833 aa18.79■□□□□ 0.6
LSP1-204ENST00000406638 OSBPL5Q9H0X9 879 aaPredicted RBP18.79■□□□□ 0.6
LSP1-204ENST00000406638 ANO10Q9NW15 660 aa18.79■□□□□ 0.6
LSP1-204ENST00000406638 ATRNO75882 1429 aa18.79■□□□□ 0.6
LSP1-204ENST00000406638 URI1O94763 535 aaPredicted RBP18.79■□□□□ 0.6
LSP1-204ENST00000406638 HSP90AB3PQ58FF7 597 aa18.79■□□□□ 0.6
LSP1-204ENST00000406638 CEP57L1Q8IYX8 460 aa18.79■□□□□ 0.6
LSP1-204ENST00000406638 GPATCH3Q96I76 525 aa18.79■□□□□ 0.6
LSP1-204ENST00000406638 XPO4Q9C0E2 1151 aaKnown RBP18.79■□□□□ 0.6
LSP1-204ENST00000406638 SEC31BQ9NQW1 1179 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms