RNA–Protein interactions for RNA: ENST00000403461.5

CEACAM1-208, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene CEACAM1, Length 1,263 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-208ENST00000403461 RTL1A6NKG5 1358 aa9.39□□□□□ -0.91
CEACAM1-208ENST00000403461 RHOQP17081 205 aa9.39□□□□□ -0.91
CEACAM1-208ENST00000403461 TATP17735 454 aaPredicted RBP9.39□□□□□ -0.91
CEACAM1-208ENST00000403461 HOXC9P31274 260 aa9.39□□□□□ -0.91
CEACAM1-208ENST00000403461 NOS2P35228 1153 aa9.39□□□□□ -0.91
CEACAM1-208ENST00000403461 ZDHHC1Q8WTX9 485 aa9.39□□□□□ -0.91
CEACAM1-208ENST00000403461 C2orf49Q9BVC5 232 aaPredicted RBP9.39□□□□□ -0.91
CEACAM1-208ENST00000403461 TRAIPQ9BWF2 469 aa9.39□□□□□ -0.91
CEACAM1-208ENST00000403461 CXXC1Q9P0U4 656 aaPredicted RBP9.39□□□□□ -0.91
CEACAM1-208ENST00000403461 CD2APQ9Y5K6 639 aa9.39□□□□□ -0.91
CEACAM1-208ENST00000403461 TONSLQ96HA7 1378 aa9.38□□□□□ -0.91
CEACAM1-208ENST00000403461 PCDH11XQ9BZA7 1347 aa9.38□□□□□ -0.91
CEACAM1-208ENST00000403461 PCDH11YQ9BZA8 1340 aa9.38□□□□□ -0.91
CEACAM1-208ENST00000403461 SERTM1A2A2V5 107 aa9.38□□□□□ -0.91
CEACAM1-208ENST00000403461 PDIA4P13667 645 aaKnown RBP9.38□□□□□ -0.91
CEACAM1-208ENST00000403461 YBX3P16989 372 aaKnown RBP eCLIP9.38□□□□□ -0.91
CEACAM1-208ENST00000403461 SSFA2P28290 1259 aa9.38□□□□□ -0.91
CEACAM1-208ENST00000403461 PHKA2P46019 1235 aa9.38□□□□□ -0.91
CEACAM1-208ENST00000403461 MSL1Q68DK7 614 aa9.38□□□□□ -0.91
CEACAM1-208ENST00000403461 B4GALNT3Q6L9W6 998 aa9.38□□□□□ -0.91
CEACAM1-208ENST00000403461 COL23A1Q86Y22 540 aaPredicted RBP9.38□□□□□ -0.91
CEACAM1-208ENST00000403461 NSD2O96028 1365 aa9.37□□□□□ -0.91
CEACAM1-208ENST00000403461 VSIG8P0DPA2 414 aa9.37□□□□□ -0.91
CEACAM1-208ENST00000403461 PLA2G4AP47712 749 aa9.37□□□□□ -0.91
CEACAM1-208ENST00000403461 HIRAP54198 1017 aaPredicted RBP9.37□□□□□ -0.91
CEACAM1-208ENST00000403461 C1orf216Q8TAB5 229 aa9.37□□□□□ -0.91
CEACAM1-208ENST00000403461 TIMMDC1Q9NPL8 285 aa9.37□□□□□ -0.91
CEACAM1-208ENST00000403461 ZNF232Q9UNY5 417 aa9.37□□□□□ -0.91
CEACAM1-208ENST00000403461 NSD3Q9BZ95 1437 aa9.37□□□□□ -0.91
CEACAM1-208ENST00000403461 ATP10DQ9P241 1426 aa9.37□□□□□ -0.91
CEACAM1-208ENST00000403461 PALLDQ8WX93 1383 aa9.37□□□□□ -0.91
CEACAM1-208ENST00000403461 EML1O00423 815 aa9.36□□□□□ -0.91
CEACAM1-208ENST00000403461 PPFIA3O75145 1194 aa9.36□□□□□ -0.91
CEACAM1-208ENST00000403461 PTSQ03393 145 aa9.36□□□□□ -0.91
CEACAM1-208ENST00000403461 FKBP5Q13451 457 aaPredicted RBP9.36□□□□□ -0.91
CEACAM1-208ENST00000403461 SMARCC1Q92922 1105 aaPredicted RBP9.36□□□□□ -0.91
CEACAM1-208ENST00000403461 DYRK1BQ9Y463 629 aa9.36□□□□□ -0.91
CEACAM1-208ENST00000403461 PARP3Q9Y6F1 533 aa9.36□□□□□ -0.91
CEACAM1-208ENST00000403461 MON2Q7Z3U7 1717 aa9.36□□□□□ -0.91
CEACAM1-208ENST00000403461 A0A1B0GTH6 734 aa9.35□□□□□ -0.91
CEACAM1-208ENST00000403461 RRS1Q15050 365 aaKnown RBP9.35□□□□□ -0.91
CEACAM1-208ENST00000403461 PHLDB3Q6NSJ2 640 aa9.35□□□□□ -0.91
CEACAM1-208ENST00000403461 MPRIPQ6WCQ1 1025 aa9.35□□□□□ -0.91
CEACAM1-208ENST00000403461 BTAF1O14981 1849 aa9.35□□□□□ -0.91
CEACAM1-208ENST00000403461 USP54Q70EL1 1684 aa9.35□□□□□ -0.91
CEACAM1-208ENST00000403461 MEGF6O75095 1541 aa9.35□□□□□ -0.91
CEACAM1-208ENST00000403461 BRD1O95696 1058 aa9.34□□□□□ -0.91
CEACAM1-208ENST00000403461 HSPA6P17066 643 aa9.34□□□□□ -0.91
CEACAM1-208ENST00000403461 SH3PXD2AQ5TCZ1 1133 aa9.34□□□□□ -0.91
CEACAM1-208ENST00000403461 NBPF6Q5VWK0 638 aa9.34□□□□□ -0.91
CEACAM1-208ENST00000403461 USHBP1Q8N6Y0 703 aa9.34□□□□□ -0.91
CEACAM1-208ENST00000403461 ZNF526Q8TF50 670 aaPredicted RBP9.34□□□□□ -0.91
CEACAM1-208ENST00000403461 COL26A1Q96A83 441 aa9.34□□□□□ -0.91
CEACAM1-208ENST00000403461 VTI1AQ96AJ9 217 aa9.34□□□□□ -0.91
CEACAM1-208ENST00000403461 AIDAQ96BJ3 306 aa9.34□□□□□ -0.91
CEACAM1-208ENST00000403461 NBPF4Q96M43 638 aa9.34□□□□□ -0.91
CEACAM1-208ENST00000403461 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.34□□□□□ -0.91
CEACAM1-208ENST00000403461 ZDHHC3Q9NYG2 299 aa9.34□□□□□ -0.91
CEACAM1-208ENST00000403461 ST20-MTHFSA0A0A6YYL1 179 aa9.33□□□□□ -0.92
CEACAM1-208ENST00000403461 SLC35F4A4IF30 521 aa9.33□□□□□ -0.92
CEACAM1-208ENST00000403461 TMF1P82094 1093 aa9.33□□□□□ -0.92
CEACAM1-208ENST00000403461 IGSF1Q8N6C5 1336 aa9.32□□□□□ -0.92
CEACAM1-208ENST00000403461 PTCD1O75127 700 aaKnown RBP9.32□□□□□ -0.92
CEACAM1-208ENST00000403461 F11P03951 625 aa9.32□□□□□ -0.92
CEACAM1-208ENST00000403461 C1orf53Q5VUE5 145 aa9.32□□□□□ -0.92
CEACAM1-208ENST00000403461 GGNBP2Q9H3C7 697 aa9.32□□□□□ -0.92
CEACAM1-208ENST00000403461 SPG7Q9UQ90 795 aa9.32□□□□□ -0.92
CEACAM1-208ENST00000403461 HCN4Q9Y3Q4 1203 aa9.32□□□□□ -0.92
CEACAM1-208ENST00000403461 INSRP06213 1382 aa9.32□□□□□ -0.92
CEACAM1-208ENST00000403461 FLT4P35916 1363 aa9.32□□□□□ -0.92
CEACAM1-208ENST00000403461 KIF24Q5T7B8 1368 aa9.32□□□□□ -0.92
CEACAM1-208ENST00000403461 FAM208AQ9UK61 1670 aaKnown RBP9.32□□□□□ -0.92
CEACAM1-208ENST00000403461 RGPD5Q99666 1765 aa9.32□□□□□ -0.92
CEACAM1-208ENST00000403461 FBLN1P23142 703 aa9.31□□□□□ -0.92
CEACAM1-208ENST00000403461 MSX1P28360 303 aa9.31□□□□□ -0.92
CEACAM1-208ENST00000403461 TXLNAP40222 546 aa9.31□□□□□ -0.92
CEACAM1-208ENST00000403461 ALDH16A1Q8IZ83 802 aa9.31□□□□□ -0.92
CEACAM1-208ENST00000403461 CCDC155Q8N6L0 562 aa9.31□□□□□ -0.92
CEACAM1-208ENST00000403461 TESK2Q96S53 571 aa9.31□□□□□ -0.92
CEACAM1-208ENST00000403461 GAS2L1Q99501 681 aaPredicted RBP9.31□□□□□ -0.92
CEACAM1-208ENST00000403461 ADCY9O60503 1353 aa9.31□□□□□ -0.92
CEACAM1-208ENST00000403461 SHANK3Q9BYB0 1731 aa9.31□□□□□ -0.92
CEACAM1-208ENST00000403461 LTN1O94822 1766 aa9.3□□□□□ -0.92
CEACAM1-208ENST00000403461 FYB1O15117 783 aa9.3□□□□□ -0.92
CEACAM1-208ENST00000403461 ATP4AP20648 1035 aa9.3□□□□□ -0.92
CEACAM1-208ENST00000403461 HSP90AB2PQ58FF8 381 aa9.3□□□□□ -0.92
CEACAM1-208ENST00000403461 PHACTR1Q9C0D0 580 aa9.3□□□□□ -0.92
CEACAM1-208ENST00000403461 TMOD3Q9NYL9 352 aa9.3□□□□□ -0.92
CEACAM1-208ENST00000403461 CHD4Q14839 1912 aa9.29□□□□□ -0.92
CEACAM1-208ENST00000403461 QSER1Q2KHR3 1735 aa9.29□□□□□ -0.92
CEACAM1-208ENST00000403461 LOC102724428A0A0B4J2F2 783 aa9.29□□□□□ -0.92
CEACAM1-208ENST00000403461 PPM1GO15355 546 aaPredicted RBP9.29□□□□□ -0.92
CEACAM1-208ENST00000403461 ARID4AP29374 1257 aaPredicted RBP9.29□□□□□ -0.92
CEACAM1-208ENST00000403461 SIK1P57059 783 aa9.29□□□□□ -0.92
CEACAM1-208ENST00000403461 C7orf43Q8WVR3 580 aa9.29□□□□□ -0.92
CEACAM1-208ENST00000403461 MKNK1Q9BUB5 465 aa9.29□□□□□ -0.92
CEACAM1-208ENST00000403461 WWC3Q9ULE0 1092 aa9.29□□□□□ -0.92
CEACAM1-208ENST00000403461 GPC6Q9Y625 555 aaPredicted RBP9.29□□□□□ -0.92
CEACAM1-208ENST00000403461 DOT1LQ8TEK3 1739 aa9.28□□□□□ -0.92
CEACAM1-208ENST00000403461 CYP27B1O15528 508 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms