RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 HMGB1P09429 215 aaKnown RBP30.46■■■□□ 2.47
CPNE1-205ENST00000401607 SH2B1Q9NRF2 756 aaPredicted RBP30.46■■■□□ 2.47
CPNE1-205ENST00000401607 ATP6V0A2Q9Y487 856 aa30.46■■■□□ 2.47
CPNE1-205ENST00000401607 ME3Q16798 604 aa30.46■■■□□ 2.47
CPNE1-205ENST00000401607 ZNF804AQ7Z570 1209 aa30.46■■■□□ 2.47
CPNE1-205ENST00000401607 MIGA1Q8NAN2 632 aa30.46■■■□□ 2.47
CPNE1-205ENST00000401607 TBC1D16Q8TBP0 767 aa30.46■■■□□ 2.47
CPNE1-205ENST00000401607 TNPO1Q92973 898 aaKnown RBP30.46■■■□□ 2.47
CPNE1-205ENST00000401607 EPB41L4AQ9HCS5 686 aaPredicted RBP30.46■■■□□ 2.47
CPNE1-205ENST00000401607 POLLQ9UGP5 575 aa30.46■■■□□ 2.47
CPNE1-205ENST00000401607 MAST2Q6P0Q8 1798 aa30.45■■■□□ 2.47
CPNE1-205ENST00000401607 PATL2C9JE40 543 aaKnown RBP30.45■■■□□ 2.46
CPNE1-205ENST00000401607 ALX1Q15699 326 aa30.45■■■□□ 2.46
CPNE1-205ENST00000401607 MASTLQ96GX5 879 aa30.45■■■□□ 2.46
CPNE1-205ENST00000401607 ZMYM6O95789 1325 aa30.45■■■□□ 2.46
CPNE1-205ENST00000401607 APPP05067 770 aa30.44■■■□□ 2.46
CPNE1-205ENST00000401607 ST3GAL1Q11201 340 aa30.44■■■□□ 2.46
CPNE1-205ENST00000401607 DHX32Q7L7V1 743 aaKnown RBP30.44■■■□□ 2.46
CPNE1-205ENST00000401607 ZNF213O14771 459 aa30.43■■■□□ 2.46
CPNE1-205ENST00000401607 NUCB2P80303 420 aa30.43■■■□□ 2.46
CPNE1-205ENST00000401607 EXOSC10Q01780 885 aaKnown RBP30.43■■■□□ 2.46
CPNE1-205ENST00000401607 PKP1Q13835 747 aa30.43■■■□□ 2.46
CPNE1-205ENST00000401607 NSUN4Q96CB9 384 aaKnown RBP30.43■■■□□ 2.46
CPNE1-205ENST00000401607 NBPF3Q9H094 633 aa30.43■■■□□ 2.46
CPNE1-205ENST00000401607 ALDH1B1P30837 517 aa30.43■■■□□ 2.46
CPNE1-205ENST00000401607 Q6ZUG5 572 aa30.43■■■□□ 2.46
CPNE1-205ENST00000401607 IFNL3Q8IZI9 196 aa30.43■■■□□ 2.46
CPNE1-205ENST00000401607 PDGFDQ9GZP0 370 aaPredicted RBP30.43■■■□□ 2.46
CPNE1-205ENST00000401607 JAG2Q9Y219 1238 aa30.43■■■□□ 2.46
CPNE1-205ENST00000401607 GSG1L2A8MUP6 293 aa30.42■■■□□ 2.46
CPNE1-205ENST00000401607 PRKAB2O43741 272 aa30.42■■■□□ 2.46
CPNE1-205ENST00000401607 GNAT2P19087 354 aa30.42■■■□□ 2.46
CPNE1-205ENST00000401607 NAA16Q6N069 864 aaPredicted RBP30.42■■■□□ 2.46
CPNE1-205ENST00000401607 SALL1Q9NSC2 1324 aa30.42■■■□□ 2.46
CPNE1-205ENST00000401607 PRDX5P30044 214 aa30.41■■■□□ 2.46
CPNE1-205ENST00000401607 MECOMQ03112 1051 aa30.41■■■□□ 2.46
CPNE1-205ENST00000401607 RIOK1Q9BRS2 568 aaKnown RBP30.41■■■□□ 2.46
CPNE1-205ENST00000401607 DUOX1Q9NRD9 1551 aa30.41■■■□□ 2.46
CPNE1-205ENST00000401607 CCDC83Q8IWF9 413 aa30.41■■■□□ 2.46
CPNE1-205ENST00000401607 CD209Q9NNX6 404 aa30.41■■■□□ 2.46
CPNE1-205ENST00000401607 MAGEB6P1A0A0J9YX57 407 aa30.4■■■□□ 2.46
CPNE1-205ENST00000401607 C2CD5Q86YS7 1000 aa30.4■■■□□ 2.46
CPNE1-205ENST00000401607 LRRC2Q9BYS8 371 aa30.4■■■□□ 2.46
CPNE1-205ENST00000401607 SLC4A4Q9Y6R1 1079 aa30.4■■■□□ 2.46
CPNE1-205ENST00000401607 WDR66Q8TBY9 1149 aa30.39■■■□□ 2.46
CPNE1-205ENST00000401607 AGXT2Q9BYV1 514 aa30.39■■■□□ 2.46
CPNE1-205ENST00000401607 IL1R1P14778 569 aa30.38■■■□□ 2.45
CPNE1-205ENST00000401607 OLFM4Q6UX06 510 aa30.38■■■□□ 2.45
CPNE1-205ENST00000401607 TBC1D10CQ8IV04 446 aa30.38■■■□□ 2.45
CPNE1-205ENST00000401607 NECAB1Q8N987 351 aa30.38■■■□□ 2.45
CPNE1-205ENST00000401607 NAPBQ9H115 298 aa30.38■■■□□ 2.45
CPNE1-205ENST00000401607 ZDHHC9Q9Y397 364 aa30.38■■■□□ 2.45
CPNE1-205ENST00000401607 ZSCAN21Q9Y5A6 473 aaPredicted RBP30.38■■■□□ 2.45
CPNE1-205ENST00000401607 CCDC88AQ3V6T2 1871 aa30.38■■■□□ 2.45
CPNE1-205ENST00000401607 C6orf229H3BNL8 230 aa30.38■■■□□ 2.45
CPNE1-205ENST00000401607 MB21D2Q8IYB1 491 aaPredicted RBP30.38■■■□□ 2.45
CPNE1-205ENST00000401607 MCM4P33991 863 aa30.37■■■□□ 2.45
CPNE1-205ENST00000401607 KIAA1551Q9HCM1 1747 aa30.37■■■□□ 2.45
CPNE1-205ENST00000401607 TIAM2Q8IVF5 1701 aa30.36■■■□□ 2.45
CPNE1-205ENST00000401607 DYNLL1P63167 89 aaKnown RBP30.36■■■□□ 2.45
CPNE1-205ENST00000401607 SPTY2D1Q68D10 685 aaPredicted RBP30.36■■■□□ 2.45
CPNE1-205ENST00000401607 STYK1Q6J9G0 422 aa30.36■■■□□ 2.45
CPNE1-205ENST00000401607 BRF1Q92994 677 aa30.36■■■□□ 2.45
CPNE1-205ENST00000401607 ZNF622Q969S3 477 aaKnown RBP eCLIP30.36■■■□□ 2.454e-6■■□□□ 12.1
CPNE1-205ENST00000401607 TMED8Q6PL24 325 aaPredicted RBP30.36■■■□□ 2.45
CPNE1-205ENST00000401607 NCOA7Q8NI08 942 aa30.36■■■□□ 2.45
CPNE1-205ENST00000401607 H0YIN7 160 aa30.35■■■□□ 2.45
CPNE1-205ENST00000401607 CHST3Q7LGC8 479 aa30.35■■■□□ 2.45
CPNE1-205ENST00000401607 NACAP1Q9BZK3 213 aa30.35■■■□□ 2.45
CPNE1-205ENST00000401607 IGSF3O75054 1194 aa30.34■■■□□ 2.45
CPNE1-205ENST00000401607 MPNDQ8N594 471 aa30.34■■■□□ 2.45
CPNE1-205ENST00000401607 FBXL16Q8N461 479 aa30.33■■■□□ 2.45
CPNE1-205ENST00000401607 SDR42E1Q8WUS8 393 aa30.33■■■□□ 2.45
CPNE1-205ENST00000401607 SMC3Q9UQE7 1217 aa30.33■■■□□ 2.45
CPNE1-205ENST00000401607 TDO2P48775 406 aa30.33■■■□□ 2.45
CPNE1-205ENST00000401607 ANTXR2P58335 489 aa30.33■■■□□ 2.45
CPNE1-205ENST00000401607 FGD1P98174 961 aa30.33■■■□□ 2.45
CPNE1-205ENST00000401607 GRIK5Q16478 980 aa30.33■■■□□ 2.45
CPNE1-205ENST00000401607 CLEC17AQ6ZS10 378 aa30.33■■■□□ 2.45
CPNE1-205ENST00000401607 RALYLQ86SE5 291 aaKnown RBP30.33■■■□□ 2.45
CPNE1-205ENST00000401607 LDHBP07195 334 aaKnown RBP30.32■■■□□ 2.44
CPNE1-205ENST00000401607 CHRNA5P30532 468 aa30.32■■■□□ 2.44
CPNE1-205ENST00000401607 DZIP1Q86YF9 867 aaKnown RBP30.32■■■□□ 2.44
CPNE1-205ENST00000401607 BRD1O95696 1058 aa30.31■■■□□ 2.44
CPNE1-205ENST00000401607 NKX2-3Q8TAU0 364 aa30.31■■■□□ 2.44
CPNE1-205ENST00000401607 GBP4Q96PP9 640 aa30.31■■■□□ 2.44
CPNE1-205ENST00000401607 SLX4Q8IY92 1834 aa30.31■■■□□ 2.44
CPNE1-205ENST00000401607 MCM5P33992 734 aa30.31■■■□□ 2.44
CPNE1-205ENST00000401607 STK3Q13188 491 aa30.31■■■□□ 2.44
CPNE1-205ENST00000401607 DPP8Q6V1X1 898 aaPredicted RBP30.31■■■□□ 2.44
CPNE1-205ENST00000401607 TACC3Q9Y6A5 838 aa30.31■■■□□ 2.44
CPNE1-205ENST00000401607 WDR19Q8NEZ3 1342 aa30.3■■■□□ 2.44
CPNE1-205ENST00000401607 PRC1O43663 620 aa30.3■■■□□ 2.44
CPNE1-205ENST00000401607 CTDSPL2Q05D32 466 aa30.3■■■□□ 2.44
CPNE1-205ENST00000401607 APOBRQ0VD83 1088 aa30.3■■■□□ 2.44
CPNE1-205ENST00000401607 GTF3C6Q969F1 213 aa30.3■■■□□ 2.44
CPNE1-205ENST00000401607 C10orf71Q711Q0 1435 aa30.3■■■□□ 2.44
CPNE1-205ENST00000401607 CHD4Q14839 1912 aa30.3■■■□□ 2.44
CPNE1-205ENST00000401607 NEDD4P46934 1319 aa30.3■■■□□ 2.44
CPNE1-205ENST00000401607 RIMBP2O15034 1052 aa30.29■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms